New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4463021169 (1.320)4 (0.030) 4/166 NT 2.4% intergenic (‑361/+33) nrdD/treC anaerobic ribonucleoside‑triphosphate reductase/trehalose‑6‑P hydrolase
?NC_000913 = 4463035 171 (1.430)intergenic (‑375/+19) nrdD/treC anaerobic ribonucleoside‑triphosphate reductase/trehalose‑6‑P hydrolase
Rejected: Frequency below cutoff threshold.

Only 100 of 198 total aligned reads displayed.

GCTACAGCGATATGTAAATTTTTTAATGAATTTGCTGGTTGAAAAATCAACAAAAACAACATACTGACAGACAAAACCCCGG‑AATGACCGG‑CATTACCGGGGCTTAGGGAAGATTTACTTCTGTAACCACCAGACAGCCTCAAAAGGCCGTAAATTCATGGCACAGGGTTGTGGTGAGGCTTCTTCGTAGTTATG  >  NC_000913/4462940‑4463134
                                                                                                 |                                                                                                   
gcTACAGCGATATGTAAATTTTTTAATGAATTTGCTGGTTGAAAAATCAACAAAAACAACATACTGACAGACAAAACCCCGG‑AATGACCGG‑CATTAc                                                                                                    >  1:3001668‑M2/1‑96 (MQ=255)
  tACAGCGATATGTAAATTTTTTAATGAATTTGCTGGTTGAAAAATCAACAAAAACAACATACTGACAGACAAAACCCCGG‑AATGACCGG‑CATTAccgggg                                                                                               <  2:1294573‑M2/100‑7 (MQ=255)
  tACAGCGATATGTAAATTTTTTAATGAATTTGCTGGTTGAAAAATCAACAAAAACAACATACTGACAGACAAAACCCCGG‑AATGACCGC‑CATTAccggg                                                                                                <  1:1435554‑M2/99‑6 (MQ=255)
   aCAGCGATATGTAAATTTTTTAATGAATTTGCTGGTTGAAAAATCAACAAAAACAACATACTGACAGACAAAACCCCGG‑AATGACCGG‑CATTACCGGGGc                                                                                              <  2:1964456/100‑1 (MQ=255)
   aCAGCGATATGTAAATTTTTTAATGAATTTGCTGGTTGAAAAATCAACAAAAACAACATACTGACAGACAAAACCCCGG‑AATGACCGG‑CATTACCGGGGc                                                                                              >  1:880178/1‑100 (MQ=255)
     aGCGATATGTAAATTTTTTAATGAATTTGCTGGTTGAAAAATCAACAAAAACAACATACTGACAGACAAAACCCCGGTAATG‑CCGGTCATTcggggttt                                                                                              >  2:838401‑M2/1‑92 (MQ=255)
      gCGATATGTAAATTTTTTAATGAATTTGCTGGTTGAAAAATCAACAAAAACAACATACTGACAGACAAAACCCCGG‑AATGACCGG‑CATTACCGGGGCTTa                                                                                           <  2:2765168/100‑1 (MQ=255)
      gCGATATGTAAATTTTTTAATGAATTTGCTGGTTGAAAAATCAACAAAAACAACATACTGACAGACAAAACCCCGG‑AATGACCGG‑CATTACCGGGGCTTa                                                                                           >  2:25546/1‑100 (MQ=255)
       cGATATGTAAATTTTTTAATGAATTTGCTGGTTGAAAAATCAACAAAAACAACATACTGACAGACAAAACCCCGG‑AATGACCGG‑CATTACCGGGGCTTAg                                                                                          <  2:2821158/100‑1 (MQ=255)
        gATATGTAAATTTTTTAATGAATTTGCTGGTTGAAAAATCAACAAAAACAACATACTGACAGACAAAACCCCGG‑AATGACCGG‑CGTTACCGGGGCTTAgg                                                                                         >  2:693191/1‑100 (MQ=255)
        gATATGTAAATTTTTTAATGAATTTGCTGGTTGAAAAATCAACAAAAACAACATACTGACAGACAAAACCCCGG‑AATGACCGG‑CATTACCGGGGCTTAgg                                                                                         <  2:658909/100‑1 (MQ=255)
           atGTAAATTTTTTAATGAATTTGCTGGTTGAAAAATCAACAAAAACAACATACTGACAGACAAAACCCCGG‑AATGACCGG‑CATTACCGGGGCTTAGGGaa                                                                                      <  2:3429934/100‑1 (MQ=255)
            tGTAAATTTTTTAATGAATTTGCTGGTTGAAAAATCAACAAAAACAACATACTGACAGACAAAACCCCGG‑AATGACCGG‑CATTACCGGGGCTTAGGGAAg                                                                                     <  2:2869573/100‑1 (MQ=255)
            tGTAAATTTTTTAATGAATTTGCTGGTTGAAAAATCAACAAAAACAACATACTGACAGACAAAACCCCGG‑AATGACCGG‑CATTACCGGGGCTTAGGGAAg                                                                                     >  1:2306721/1‑100 (MQ=255)
            tGTAAATTTTTTAATGAATTTGCTGGTTGAAAAATCAACAAAAACAACATACTGACAGACAAAACCCCGG‑AATGACCGG‑CATTACCGGGGCTTAGGGAAg                                                                                     >  2:1982806/1‑100 (MQ=255)
            tGTAAATTTTTTAATGAATTTGCTGGTTGAAAAATCAACAAAAACAACATACTGACAGACAAAACCCCGG‑AATGACCGG‑CATTACCGGGGCTTAGGGAAg                                                                                     >  2:1053561/1‑100 (MQ=255)
            tGTAAATTTTTTAATGAATTTGCTGGTTGAAAAATCAACAAAAACAACATACTGACAGACAAAACCCCGG‑AATGACCGG‑CATTACCGGAGCTTAGGGAAg                                                                                     >  1:313863/1‑100 (MQ=255)
             gTAAATTTTTTAATGAATTTGCTGGTTGAAAAATCAACAAAAACAACATACTGACAGACAAAACCCCGG‑AATGACCGG‑CATTACCGGGGCTTAGGGAAGa                                                                                    >  2:3315369/1‑100 (MQ=255)
              tAAATTTTTTAATGAATTTGCTGGTTGAAAAATCAACAAAAACAACATACTGACAGACAAAACCCCGG‑AATGACCGG‑CATTACCGGGGCTTAGGGAAGAt                                                                                   <  2:2534194/100‑1 (MQ=255)
               aaaTTTTTTAATGAATTTGCTGGTTGAAAAATCAACAAAAACAACATACTGACAGACAAAACCCCGG‑AATGACCGG‑CATTACCGGGGCTTAGGGAAGAtt                                                                                  >  1:2947555/1‑100 (MQ=255)
               aaaTTTTTTAATGAATTTGCTGGTTGAAAAATCAACAAAAACAACATACTGACAGACAAAACCCCGG‑AATGACCGG‑CATTACCGGGGCTTAGGGAAGAtt                                                                                  <  1:864069/100‑1 (MQ=255)
               aaaTTTTTTAATGAATTTGCTGGTTGAAAAATCAACAAAAACAACATACTGACAGACAAAACCCCGG‑AATGACCGG‑CATTACCGGGGCTTAGGGAAGAtt                                                                                  <  2:2616702/100‑1 (MQ=255)
               aaaTTTTTTAATGAATTTGCTGGTTGAAAAATCAACAAAAACAACATACTGACAGACAAAACCCCGG‑AATGACCGG‑CATTACCGGGGCTTAGGGAAGAtt                                                                                  >  2:1315775/1‑100 (MQ=255)
               aaaTTTTTTAATGAATTTGCTGGTTGAAAAATCAACAAAAACAACATACTGACAGACAAAACCCCGG‑AATGACCGA‑CATTACCGGGGCCTAGGGAAGAtt                                                                                  >  1:677464/1‑100 (MQ=255)
               aaaTTTTCTAATGAATTTGCTGGTTGAAAAATCAACAAAAACAACATACTGACAGACAAAACCCCGG‑AATGACCGG‑CATTACCGGGGCTTAGGGAAGAtt                                                                                  >  2:1821221/1‑100 (MQ=255)
                 aTTTTTTAATGAATTTGCTGGTTGAAAAATCAACAAAAACAACATACTGACAGACAAAACCCCGG‑AATGACCGG‑CATTACCGGGGCTTAGGGAAGATTTa                                                                                >  1:1749102/1‑100 (MQ=255)
                   tttttAATGAATTTGCTGGTTGAAAAATCAACAAAAACAACATACTGACAGACAAAACCCCGG‑AATGACCGG‑CATTACCGGGGCTTAGGGAAGATTTACt                                                                              >  2:2216165/1‑100 (MQ=255)
                   tttttAATGAATTTGCTGGTTGAAAAATCAACAAAAACAACATACTGACAGACAAAACCCCGG‑AATGACCGG‑CATTACCGGGGCTTAGGGAAGATTTACt                                                                              <  2:1935579/100‑1 (MQ=255)
                    ttttAATGAATTTGCTGGTTGAAAAATCAACAAAAACAACATACTGACAGACAAAACCCCGG‑AATGACCGG‑CATTACCGGGGCTTAGGGAAGATTTACtt                                                                             <  1:527834/100‑1 (MQ=255)
                     tttAATGAATTTGCTGGTTGAAAAATCAACAAAAACAACATACTGACAGACAAAACCCCGG‑AATGACCGG‑CATTACCGGGGCTTAGGGAAGATTTACTTc                                                                            <  1:1490886/100‑1 (MQ=255)
                      ttAATGAATTTGCTGGTTGAAAAATCAACAAAAACAACATACTGACAGACAAAACACCGG‑AATGACCGG‑CATTACCGGGGCTTAGGGAAGATTTACTTCt                                                                           >  1:1582838/1‑100 (MQ=255)
                       tAATGAATTTGCTGGTTGAAAAATCAACAAAAACAACATACTGACAGACAAAACCCCGG‑AATGACCGG‑CATTACCGGGGCTTAGGGAAGATTTACTTCtn                                                                          <  2:1792948/100‑2 (MQ=255)
                       tAATGAATTTGCTGGTTGAAAAATCAACAAAAACAACATACTGACAGACAAAACCCCGG‑AATGACCGG‑CATTACCGGGGCTTAGGGAAGATTTACTTCtn                                                                          <  1:706505/100‑2 (MQ=255)
                        aaTGAATTTGCTGGTTGAAAAATCAACAAAAACAACATACTGACAGACAAAACCCCGG‑AATGACCGG‑CATTACCGGGGCTTAGGGAAGATTTACTTCTGt                                                                         <  1:2846060/100‑1 (MQ=255)
                         aTGAATTTGCTGGTTGAAAAATCAACAAAAACAACATACTGACAGACAAAACCCCGG‑AATGACCGG‑CATTACCGGGGCTTAGGGAAGATTTACTTCTGTa                                                                        >  2:1528320/1‑100 (MQ=255)
                         aTGAATTTGCTGGTTGAAAAATCAACAAAAACAACATACTGACAGACAAAACCCCGG‑AATGACCGG‑CATTACCGGGGCTTAGGGAAGATTTACTTCTGTa                                                                        >  2:1129816/1‑100 (MQ=255)
                         aTGAATTTGCTGGTTGAAAAATCAACAAAAACAACATACTGACAGACAAAACCCCGG‑AATGACCGG‑CATTACCGGGGCTTAGGGAAGATTTACTTCTGTa                                                                        <  2:2308637/100‑1 (MQ=255)
                         aTGAATTTGCTGGTTGAAAAATCAACAAAAACAACATACTGACAGACAAAACCCCGG‑AATGACCGG‑CATTACCGGGGCTTAGGGAAGATTTACTTCTGTa                                                                        <  2:2392577/100‑1 (MQ=255)
                         aTGAATTTGCTGGTTGAAAAATCAACAAAAACAACATACTGACAGACAAAACCCCGG‑AATGACCGG‑CATTACCGGGGCTTAGGGAAGATTTACTTCTGTa                                                                        >  2:495385/1‑100 (MQ=255)
                           gAATTTGCTGGTTGAAAAATCAACAAAAACAACATACTGACAGACAAAACCCCGG‑AATGACCGG‑CATTACCGGGGCTTAGGGAAGATTTACTTCTGTAac                                                                      >  1:1139105/1‑100 (MQ=255)
                            aaTTTGCTGGTTGAAAAATCAACAAAAACAACATACTGACAGACAAAACCCCGG‑AATGACCGG‑CATTACCGGGGCTTAGGGAAGATTTACTTCTGTAacc                                                                     <  1:828523/100‑1 (MQ=255)
                            aaTTTGCTGGTTGAAAAATCAACAAAAACAACATACTGACAGACAAAACCCCGG‑AATGACCGG‑CATTACCGGGGCTTAGGGAAGATTTACTTCTGTAacc                                                                     <  1:3220539/100‑1 (MQ=255)
                               ttGCTGGTTGAAAAATCAACAAAAACAACATACTGACAGACAAAACCCCGG‑AATGACCGG‑CATTACCGGGGCTTAGGGAAGATTTACTTCTGTAaccacc                                                                  <  1:1978137/100‑1 (MQ=255)
                                tGCTGGTTGAAAAATCAACAAAAACAACATACTGACAGACAAAACCCCGG‑AAGGACCGG‑CATTACCGGGGCTTAGGGAAGATTTACTTCTGTAAccacca                                                                 <  2:1656786/100‑1 (MQ=255)
                                 gatGGTTGAAAAATCAACAAAAACAACATACTGACAGACAAAACCCCGG‑AATGACCGG‑CATTACCGGGGCTTAGGGAAGATTTACTTCTGTAACCACCAg                                                                <  1:2103265/98‑1 (MQ=255)
                                  cTGGTTGAAAAATCAACAAAAACAACATACTGACAGACAAAACCCCGG‑AATGACCGG‑CATTACCGGGGCTTAGGGAAGATTTACTTCTGTAACCACCAGa                                                               >  1:1741376/1‑100 (MQ=255)
                                   tGGTTGAAAAATCAACAAAAACAACATACTGACAGACAAAACCCCGG‑AATGACCGG‑CATTACCGGGGCTTAGGGAAGATTTACTTCTGTAACCACCAGAc                                                              <  1:743954/100‑1 (MQ=255)
                                    ggTTGAAAAATCAACAAAAACAACATACTGACAGACAAAACCCCGG‑AATGACCGG‑CATTACCGGGGCTTAGGGAATATTTACTTCTGTAACCACCAGACa                                                             >  1:1198416/1‑100 (MQ=255)
                                    ggTTGAAAAATCAACAAAAACAACATACTGACAGACAAAACCCCGG‑AATGACCGG‑CATTACCGGGGCTTAGGGAAGATTTACTTCTGTAACCACCAGACa                                                             >  2:1677970/1‑100 (MQ=255)
                                      ttGAAACATCAACAAAAACAACCTACTGCCAGACAAAACCCCGG‑AATGACCGG‑CATTACCGGGGCTTAGGGAAGATTTACTTCTGTAACCACCAGACAGc                                                           <  2:644069/100‑1 (MQ=255)
                                      ttGAAAAATCAACAAAAACAACATACTGACAGACAAAACCCCGG‑AATGACCGG‑CATTACCGGGGCTTAGGGAAGATTTACTTCTGTAACCACCAGACAGc                                                           <  2:212809/100‑1 (MQ=255)
                                       tGAAAAATCAACAAAAACAACATACTGACAGACAAAACCCCGG‑AATGACCGG‑CATTACCGGGGCTTAGGGAAGATTTACTTCTGTAACCACCAGACAGcc                                                          >  1:459112/1‑100 (MQ=255)
                                       tGAAAAATCAACAAAAACAACATACTGACAGACAAAACCCCGG‑AATGACCGG‑CATTACCGGGGCTTAGGGAAGATTTACTTCTGTAACCACCAGACAGcc                                                          <  2:2861015/100‑1 (MQ=255)
                                       tGAAAAATCAACAAAAACAACATACTGACAGACAAAACCCCGG‑AATGACCGG‑CATTACCGGGGCTTAGGGAAGATTTACTTCTGTAACCACCAGACAGcc                                                          >  2:2841812/1‑100 (MQ=255)
                                       tGAAAAATCAACAAAAACAACATACTGACAGACAAAACCCCGG‑AATGACCGG‑CATTACCGGGGCTTAGGGAAGATTTACTTCTGTAACCACCAGACAGcc                                                          >  1:393525/1‑100 (MQ=255)
                                             aTCAACAAAAACAACATACTGACAGACAAAACCCCGG‑AATGACCGG‑CATTACCGGGGCTTAGGGAAGATTTACTTCTGTAACCACCAGACAGCCTCaaaa                                                    <  2:1093224/100‑1 (MQ=255)
                                                aacaaAAACAACATACTGACAGACAAAACCCCGG‑AATGACCGG‑CATTACCGGGGCTTAGGGAAGATTTACTTCTGTAACCACCAGACAGCCTCAAAAGGc                                                 <  1:130520/100‑1 (MQ=255)
                                                aacaaAAACAACATACTGACAGACAAAACCCCGG‑AATGACCGG‑CATTACCGGGGCTTAGGGAAGATTTACTTCTGTAACCACCAGACAGCCTCAAAAGGc                                                 <  2:613227/100‑1 (MQ=255)
                                                aacaaAAACAACATACTGACAGACAAAACCCCGG‑AATGACCGG‑CATTACCGGGGCTTAGGGAAGATTTACTTCTGTAACCACCAGACAGCCTCAAAAGGc                                                 >  1:249215/1‑100 (MQ=255)
                                                 acgaaaaCAACATACTGACAGACAAAACCCCGG‑AATGACCGG‑CATTACCGGGGCTTAGAGAAGATTTACTTCTGTAACCACCAGACAGCCTCAAAAGGc                                                 >  1:1346757/4‑99 (MQ=255)
                                                  caaAAACAACATACTGACAGACAAAACCCCGG‑AATGACCGG‑CATTACCGGGGCTTAGGGAAGATTTACTTCTGTAACCACCAGACAGCCTCAAAAGGCCg                                               >  2:1247798/1‑100 (MQ=255)
                                                  caaAAACAACATACTGACAGACAAAACCCCGG‑AATGACCGG‑CATTACCGGGGCTTAGGGAAGATTTACTTCTGTAACCACCAGACAGCCTCAAAAGGCCg                                               <  2:1444498/100‑1 (MQ=255)
                                                        caacaTACTGACAGACAAAACCCCGG‑AATGACCGG‑CATTACCGGGGCTTAGGGAAGATTTACTTCTGTAACCACCAGACAGCCTCAAAAGGCCGTAAAtt                                         >  2:2717775/1‑100 (MQ=255)
                                                         aacaTACTGACAGACAAAACCCCGG‑AATGACCGG‑CATTACCGGGGCTTAGGGAAGATTTACTTCTGTAACCACCAGACAGCCTCAAAAGGCCGTAAATTc                                        >  1:1990937/1‑100 (MQ=255)
                                                          acaTACTGACAGACAAAACCCCGG‑AATGACCGG‑CATTACCGGGGCTTACGGAAGATTTACTTCTGTAACCACCAGACAGCCTCAAAAGGCCGTAAATTCa                                       <  1:25546/100‑1 (MQ=255)
                                                           caTACTGACAGACAAAACCCCGG‑AATGACCGG‑CATTACCGGGGCTTAGGGAAGATTTACTTCTGTAACCACCAGACAGCCTCAAAAGGCCGTAAATTCAt                                      <  1:1501037/100‑1 (MQ=255)
                                                            aTACTGACAGACAAAACCCCGG‑AATGACCGG‑CATTACCGGGGCTTAGGGAAGATTTACTTCTGTAACCACCAGACAGCCTCAAAAGGCCGTAAATTCATg                                     <  1:1021829/100‑1 (MQ=255)
                                                             tACTGACAGACAAAACCCCGG‑AATGACCGG‑CATTACCGGGGCTTAGGGAAGATTTACTTCTGTAACCACCAGACAGCCTCAAAAGGCCGTAAATTCATgg                                    <  1:1656260/100‑1 (MQ=255)
                                                             tACTGACAGACAAAACCCCGG‑AATGACCGG‑CATTACCGGGGCTTAGGGAAGATTTACTTCTGTAACCACCAGACAGCCTCAAAAGGCCGTAAATTCATgg                                    <  2:2280547/100‑1 (MQ=255)
                                                                 gacagacaAAACCCCGG‑AATGACCGG‑CATTACCGGGGCTTAGGGAAGATTTACTTCTGTAACCACCAGACAGCCTCAAAAGGCCGTAAATTCATGGcaca                                <  1:3052817/100‑1 (MQ=255)
                                                                 gacagacaAAACCCCGG‑AATGACCGG‑CATTACCGGGGCTTAGGGAAGATTTACTTCTGTAACCACCAGACAGCCTCAAAAGGCCGTAAATTCATGGcaca                                >  1:655399/1‑100 (MQ=255)
                                                                  acagacaAAACCCCGG‑AATTACCGG‑CATTACCGGTGCTTAGGGAAGATTTACTTCTGTAACCACCAGACAGCCTCAAAAGGCCGTAAATTCATGGc                                   <  1:3157936/96‑1 (MQ=255)
                                                                  acagacaAAACCCCGG‑AATGACCGG‑CATTACCGGGGCTTAGGGAAGATTTACTTCTGTAACCACCAGACAGCCTCAAAAGGCCGTAAATTCATGGCACAg                               <  2:3100344/100‑1 (MQ=255)
                                                                   cagacaAAACCCCGG‑AATGACCGG‑CATTACCGGGGCTTAGGGAAGATTTACTTCTGTAACCACCAGACAGCCTCAAAAGGCCGTAAATTCATGGCACAgg                              <  2:2947578/100‑1 (MQ=255)
                                                                     gacaAAACCCCGG‑AATGACCGG‑CATTACCGGGGCTTAGGGAAGATTTACTTCTGTAACCACCAGACAGCCTCAAAAGGCCGTAAATTCATGGCACAGGGt                            >  2:2950903/1‑100 (MQ=255)
                                                                     gacaAAACCCCGG‑AATGACCGG‑CATTACCGGGGCTTAGGGAAGATTTACTTCTGTAACCACCAGACAGCCTCAAAAGGCCGTAAATTCATGGCACAGGGt                            >  1:991594/1‑100 (MQ=255)
                                                                       caAAACCCCGG‑AATGACCGG‑CATTAccggggttttgtctgtcaggatgttgtttttgttgatttttcaaccagcaaattcattaaaaaatttacatatcg                          <  1:286525‑M2/100‑76 (MQ=255)
                                                                          aaCCCCGG‑AATGACCGG‑CATTACCGGGGCTTAGGGAAGATTTACTTCTGTAACCACCAGACAGCCTCAAAAGGCCGTAAATTCATGGCACAGGGTTgtgg                       <  2:56633/100‑1 (MQ=255)
                                                                           aCCCCGG‑AATGACCGG‑CATTACCGGGGCTTAGGGAAGATTTACTTCTGTAACCACCAGACAGCCTCAAAAGGCCGTAAATTCATGGCACAGGGTTgtggt                      >  1:1079626/1‑100 (MQ=255)
                                                                            ccccGG‑AATGACCGG‑CATTAccggggttttgtctgtcagtatgttgtttttgttgatttttcaaccagcaaattcattaaaaaatttacatatcgctgta                     <  1:1517464‑M2/100‑81 (MQ=255)
                                                                            ccccGG‑AATGACCGG‑CATTACCGGGGCTTAGGGAAGATTTACTTCTGTAACCACCAGACAGCCTCAAAAGGCCGTAAATTCATGGCACAGGGTTgtggtg                     >  2:770896/1‑100 (MQ=255)
                                                                             cccGG‑AATGACCGG‑CATTACCGGGGCTTAGGGAAGATTTACTTCTGTAACCACCAGACAGCCTCAAAAGGCCGTAAATTCATGGCACAGGGTTGTGGTGa                    <  1:2771565/100‑1 (MQ=255)
                                                                             cccGG‑AATGACCGG‑CATTACCGGGGCTTAGGGAAGATTTACTTCTGTAACCACCAGACAGCCTCAAAAGGCCGTAAATTCATGGCACAGGGTTGTGGTGa                    <  1:2285970/100‑1 (MQ=255)
                                                                               cGG‑AATGATCTG‑CATTACCGGGTCTTAGGGAAGATTTACTTCTGTAACCACCAGACAGCCTCAAAAGGCCGTAAATTCATGGCACAGGGTtg                          <  1:2604346/92‑1 (MQ=255)
                                                                               cGG‑AATGACCGG‑CATTACCGGGGCTTAGGGAAGATTTACTTCTGTAACCACCAGACAGCCTCAAAAGGCCGTAAATTCATGGCACAGGGTTGTGGTGAgg                  <  1:3438599/100‑1 (MQ=255)
                                                                                gg‑AATGACCGG‑CATTACCGGGGCTTAGGGAAGATTTACTTCTGTAACCACCAGACAGCCTCAAAAGGCCGTAAATTCATGGCACAGGGTTGTGGTGAGGc                 >  1:2735152/1‑100 (MQ=255)
                                                                                gg‑AATGACCGG‑CATTACCGGGGCTTAGGGAAGATTTACTTCTGTAACCACCAGACAGCCTCAAAAGGCCGTAAATTCATGGCACAGGGTTGTGGTGAGGc                 <  2:314580/100‑1 (MQ=255)
                                                                                cgtaaTGACCGG‑CATTACCGGGGCTTAGGGAAGATTTACTTCTGTAACCACCAGACAGCCTCAAAAGGCCGTAAATTCATGGCACAGGGTTGTGGTGAgg                  <  1:2125717/97‑1 (MQ=255)
                                                                                    aTGCCCGG‑CATTACCGGGGCTTAGGGAAGATTTACTTCGGTAACCACGAGACAGCCTCAAAAAGCGGTAAAGTCAGGTCACAGGGTTGTGCTGACGcgtc              >  1:2016124/1‑100 (MQ=255)
                                                                                     tGACCGG‑CATTACCGGGGCTTAGGGAAGATTTACTTCTGTAACCACCAGACAGCCTCAAAAGGCCGTAAATTCATGGCACAGGGTTGTGGTGAGGcttct             <  2:1734598/100‑1 (MQ=255)
                                                                                       aCCGG‑CATTACCGGGGCTTAGGGAAGATTTACTTCTGTAACCACCAGACAGCCTCAAAAGGCCGTAAATTCATGGCACAGGGTTGTGGTGAGGct                <  1:574783/95‑1 (MQ=255)
                                                                                       aCCGG‑CATTACCGGGGCTTAGGGAAGATTTACTTCTGTAACCACCAGACAGCCTCAAAAGGCCGTAAATTCATGGCACAGGGTTGTGGTGAGGCttcttc           <  1:1769982/100‑1 (MQ=255)
                                                                                        ccGG‑CATTACCGGGGCTTAGGGAAGATTTACTTCTGTAACCACCAGACAGCCTCAAAAGGCCGTAAATTCATGGCACAGGGTTGTGGTGAGGCTTCTTCg          >  1:594585/1‑100 (MQ=255)
                                                                                        ccGG‑CATTACCGGGGCTTAGGGAAGATTTACTTCTGTAACCACCAGACAGCCTCAAAAGGCCGTAAATTCATGGCACAGGGTTGTGGTGAGGCTTCTTCg          <  1:3325186/100‑1 (MQ=255)
                                                                                          gg‑CATTACCGGGGCTTAGGGAAGATTTACTTCTGTAACCACCAGACAGCCTCAAAAGGCCGTAAATTCATGGCACAGGGTTGTGGTGAGGCTTCTTCGTa        >  2:2093944/1‑100 (MQ=255)
                                                                                           g‑CATTACCGGGGCTTAGGGAAGATTTACTTCTGTAACCACCAGACAGCCTCAAAAGGCCGTAAATTCATGGCACGGGGTTGTGGTGAGGCTCCTTCGTAg       >  1:2369902/1‑100 (MQ=255)
                                                                                           g‑CATTACCGGGGCTTAGGGAAGATTTACTTCTGTAACCACCAGACAGCCTCAAAAGGCCGTAAATTCATGGCACAGGGTTGTGGTGAGGCTTCTTCGTAg       <  1:1691045/100‑1 (MQ=255)
                                                                                               ttACCGGGGCTTAGGGAAGATTTACTTCTGTAACCACCAGACAGCCTCAAAAGGCCGTAAATTCATGGCACAGGGTTGTGGTGAGGCTTCTTCGTAGTTa    <  2:1582853/100‑1 (MQ=255)
                                                                                                 aCCGGGGCTTAGGGAAGATTTACTTCTGTAACCACCAGACAGCCTCAAAAGGCCGTAAATTCATGGCACAGGGTTGTGGTGAGGCTTCTTCGTAGTTATg  >  1:1728088/1‑100 (MQ=255)
                                                                                                 aCCGGGGCTTAGGGAAGATTTACTTCTGTAACCACCAGACAGCCTCAAAAGGCCGTAAATTCATGGCACAGGGTTGTGGTGAGGCTTCTTCGTAGTTATg  >  1:1030975/1‑100 (MQ=255)
                                                                                                 |                                                                                                   
GCTACAGCGATATGTAAATTTTTTAATGAATTTGCTGGTTGAAAAATCAACAAAAACAACATACTGACAGACAAAACCCCGG‑AATGACCGG‑CATTACCGGGGCTTAGGGAAGATTTACTTCTGTAACCACCAGACAGCCTCAAAAGGCCGTAAATTCATGGCACAGGGTTGTGGTGAGGCTTCTTCGTAGTTATG  >  NC_000913/4462940‑4463134

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.