New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4040481NA (NA)67 (0.690) 13/166 NT 100% intergenic (+58/‑36) rrlA/rrfA 23S ribosomal RNA of rrnA operon/5S ribosomal RNA of rrnA operon
?NC_000913 = 4040505 0 (0.000)intergenic (+82/‑12) rrlA/rrfA 23S ribosomal RNA of rrnA operon/5S ribosomal RNA of rrnA operon

AATGAACCGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCG  >  NC_000913/4040401‑4040580
                                                                                |                                                                                                   
aaTGAACCGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGT                                                                                  <  2:2382017‑M2/100‑1 (MQ=255)
aaTGAACCGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGT                                                                                  <  1:744238‑M2/100‑1 (MQ=255)
aaTGAACCGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGT                                                                                  <  1:519171‑M2/100‑1 (MQ=255)
aaTGAACCGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGT                                                                                  <  2:221616‑M2/100‑1 (MQ=255)
aaTGAACCGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGT                                                                                  <  2:1993995‑M2/100‑1 (MQ=255)
aaTGAACCGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGT                                                                                  <  1:2531353‑M2/100‑1 (MQ=255)
aaTGAACCGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGT                                                                                  <  1:2216937‑M2/100‑1 (MQ=255)
aaTGAACCGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGT                                                                                  <  2:852710‑M2/100‑1 (MQ=255)
 aTGAACCGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTC                                                                                 >  1:382512‑M2/1‑100 (MQ=255)
 aTGAACCGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTC                                                                                 <  1:1305121‑M2/100‑1 (MQ=255)
 aTGAACCGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTC                                                                                 <  1:2902495‑M2/100‑1 (MQ=255)
  tGACCCGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTCATACAGATTAAATCAGAACGCAGAAGCGGTCT                                                                                >  2:2764520‑M2/1‑100 (MQ=255)
  tGAACCGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGGCTTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTC                                                                                 <  2:1734314‑M2/99‑1 (MQ=255)
  tGAACCGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGGATTGAGAGACGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCT                                                                                >  1:319552‑M2/1‑100 (MQ=255)
  tGAACCGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCT                                                                                <  2:677776‑M2/100‑1 (MQ=255)
  tGAACCGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCT                                                                                >  2:1858725‑M2/1‑100 (MQ=255)
  tGAACCGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCT                                                                                >  1:476442‑M2/1‑100 (MQ=255)
  tGAACCGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCT                                                                                <  1:1091981‑M2/100‑1 (MQ=255)
  tGAACCGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCT                                                                                >  2:1999361‑M2/1‑100 (MQ=255)
  tGAACCGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCT                                                                                >  1:1776714‑M2/1‑100 (MQ=255)
  tGAACCGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCT                                                                                <  2:1737313‑M2/100‑1 (MQ=255)
  tGAACCGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCT                                                                                <  2:1261794‑M2/100‑1 (MQ=255)
   gAACCGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCCGAACGCAGAAGCGGTCTG                                                                               <  2:634967‑M2/100‑1 (MQ=255)
   gAACCGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTG                                                                               >  1:1132844‑M2/1‑100 (MQ=255)
   gAACCGTGAGGCTTAACCTTACAACGCCGAAGGTGTTGTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTG                                                                               >  1:1701821‑M2/1‑100 (MQ=255)
    aaCCGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTta                                                                              >  2:2705476‑M2/1‑98 (MQ=255)
    aaCCGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGA                                                                              >  1:908887‑M2/1‑100 (MQ=255)
    aaCCGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGA                                                                              >  1:803351‑M2/1‑100 (MQ=255)
    aaCCGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGA                                                                              >  2:1001208‑M2/1‑100 (MQ=255)
    aaCCGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGA                                                                              <  1:1238168‑M2/100‑1 (MQ=255)
    aaCCGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGA                                                                              >  2:457710‑M2/1‑100 (MQ=255)
     aCCGTGAGGCTTTACCTTACAACGCCGAAGGTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCAGAAGCGGTCTGAT                                                                             <  1:1155184‑M2/100‑1 (MQ=255)
     aCCGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGAT                                                                             <  1:1837695‑M2/100‑1 (MQ=255)
     aCCGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGAT                                                                             >  2:2652852‑M2/1‑100 (MQ=255)
     aCCGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGAT                                                                             <  2:286140‑M2/100‑1 (MQ=255)
            ggCTTAACCTTACAACGCCGAAGGTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATATAGATTAAATCAGACCGCTTCTGCGGTCTGATttaatct                                                                      >  1:1797505‑M2/1‑93 (MQ=255)
                     ttACAACGCCGAAGGTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggc                                                             >  1:333420‑M2/1‑84 (MQ=255)
                            gCCGAAGGTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTGATttaatctgtatcaggctgaaaat                                                      >  1:314213‑M2/1‑77 (MQ=255)
                                                    gagaAGATTTTCAGCCTGATACAGATTAAATCCGAACGCAGAAGCGGTCTGATttgatctgtatcaggctgaaaatcttctctcatccgcctaaacagct                              <  1:714780‑M2/100‑48 (MQ=255)
                                                                 gCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacagcttcggcgttgtaa                 <  1:2764751‑M2/100‑61 (MQ=255)
                                                                    tGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggt              <  1:933986‑M2/100‑64 (MQ=255)
                                                                        aCAGATTAAATCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacagcttcggcgttgtaaggttaag          <  2:1142910‑M2/100‑68 (MQ=255)
                                                                         cgatctaaatcAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagc         >  2:2069129‑M2/6‑32 (MQ=255)
                                                                         cAGATTAAATCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacagcttcggcgttgtaaggttaagc         <  1:2040329‑M2/100‑69 (MQ=255)
                                                                         cAGATTAAATCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagc         <  2:2304266‑M2/100‑69 (MQ=255)
                                                                         cAGATTAAATCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagc         <  2:2304132‑M2/100‑69 (MQ=255)
                                                                         cAGATTAAATCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagc         <  2:1530694‑M2/100‑69 (MQ=255)
                                                                         cAGATTAAATCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagc         <  2:2304637‑M2/100‑69 (MQ=255)
                                                                          gatctaaatCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcc        >  1:22953‑M2/5‑31 (MQ=255)
                                                                          aGATTAAATCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcatccgccaaaacagctgcggcgttgtaaggttaagcct        <  1:1338521‑M2/100‑70 (MQ=255)
                                                                          aGATTAAATCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcc        <  2:2060860‑M2/100‑70 (MQ=255)
                                                                          aGATTAAATCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcc        <  2:2863207‑M2/100‑70 (MQ=255)
                                                                          aGATTAAATCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggatgaaaatcttctctcaatccgccaaaacagcttcggcgttgtaaggttaagcc        <  1:339472‑M2/100‑70 (MQ=255)
                                                                           gATTAAATCAGAGCGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacagcttcggcgttgtaaggttaagcct       <  1:2703519‑M2/100‑71 (MQ=255)
                                                                           gATTAAATCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcatccgccaaaacatcttcggcgttgtaaggttaagcctc       <  2:605431‑M2/100‑71 (MQ=255)
                                                                           gATTAAATCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcct       <  1:2866361‑M2/100‑71 (MQ=255)
                                                                            aTTAAATCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcatccgccaaaacagcttcggcgttgtaaggttaagcctca      <  2:459315‑M2/100‑72 (MQ=255)
                                                                             ttAAATCAGAACGCAGAAGCGGTCTGATttaatctgtgtcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctca     <  1:1558797‑M2/100‑73 (MQ=255)
                                                                              tAAATCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcatccgccaaaacagcttcggcgttgtaaggttaagcctcacg    <  2:2343743‑M2/100‑74 (MQ=255)
                                                                              tAAATCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcac    <  1:2346842‑M2/100‑74 (MQ=255)
                                                                               aaaTCAGAACGCAGAAGCGGTCTGCTctaatctgtatcaggctgaaaatcttatctcaatctgccaaaacaccttcggcgttgtaaggttaagcctca     <  1:1005184‑M2/98‑73 (MQ=255)
                                                                               aaaTCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcatccgccaaaacatcttcggcgttgtaaggttaagcctcacgg   <  2:431589‑M2/100‑75 (MQ=255)
                                                                               aaaTCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcatccgccaaaacatcttcggcgttgtaaggttaagcctcacgg   <  1:1005831‑M2/100‑75 (MQ=255)
                                                                               aaaTCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcatccgccaaaacagcttcggcgttgtaaggttaagcctcacgg   <  2:1002861‑M2/100‑75 (MQ=255)
                                                                               aaaTCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcatccgccaaaacagcttcggcgttgtaaggttaagcctcacgg   <  2:2261010‑M2/100‑75 (MQ=255)
                                                                               aaaTCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcatccgccaaaacagcttcggcgttgtaaggttaagcctcacgg   <  1:731178‑M2/100‑75 (MQ=255)
                                                                               aaaTCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacagcttcggcgttgtaaggttaagcctcacg   <  1:2829525‑M2/100‑75 (MQ=255)
                                                                               aaaTCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacagcttcggcgttgtaaggttaagcctcacg   <  2:2305843‑M2/100‑75 (MQ=255)
                                                                               aaaTCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacg   <  2:314790‑M2/100‑75 (MQ=255)
                                                                               aaaTCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacg   <  2:950155‑M2/100‑75 (MQ=255)
                                                                               aaaTCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacg   <  1:1952032‑M2/100‑75 (MQ=255)
                                                                               aaaTCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacg   <  2:49939‑M2/100‑75 (MQ=255)
                                                                               aaaTCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacg   <  2:11618‑M2/100‑75 (MQ=255)
                                                                               aaaTCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacg   <  2:1925393‑M2/100‑75 (MQ=255)
                                                                               aaaTCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagccagatc   <  2:22954‑M2/100‑75 (MQ=255)
                                                                               aaaTCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcagatcg   <  1:2069117‑M2/100‑75 (MQ=255)
                                                                               aaaTCAGAACGCAGAAGCGGTCTGATttaagctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgtagtaagggtaagcctcacg   <  2:1267392‑M2/100‑75 (MQ=255)
                                                                                aaTCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcatccgccaaaacatcttcggcgttgtaaggttaagcctcacggt  <  1:640901‑M2/100‑76 (MQ=255)
                                                                                aaTCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcatccgccaaaacatcttcggcgttgtaaggttaagcctcacggt  <  2:841970‑M2/100‑76 (MQ=255)
                                                                                aaTCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcatccgccaaaacatcttcggcgttgtaaggttaagcctcacggt  <  2:432302‑M2/100‑76 (MQ=255)
                                                                                aaTCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcatccgccaaaacagcttcggcgttgtaaggttaagcctcacggt  <  2:2005233‑M2/100‑76 (MQ=255)
                                                                                aaTCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacgg  <  2:1418674‑M2/100‑76 (MQ=255)
                                                                                aaTCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacgg  <  2:2225621‑M2/100‑76 (MQ=255)
                                                                                aaTCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacgg  <  2:1961484‑M2/100‑76 (MQ=255)
                                                                                aaTCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacgg  <  1:421271‑M2/100‑76 (MQ=255)
                                                                                aaTCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacg   <  1:2344631‑M2/99‑75 (MQ=255)
                                                                                aaTCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcac    <  2:491641‑M2/98‑74 (MQ=255)
                                                                                aaTCAGAACGCAGAAGCGGTCTGATttaatctgtatcagactgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacgg  <  1:1818469‑M2/100‑76 (MQ=255)
                                                                                aaTCAGAACGCAGAAGCGGTCTGATttaatatgaatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttcagcctcacgg  <  1:1916807‑M2/100‑76 (MQ=255)
                                                                                aaTCAGAACGAAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcatccgccaaaacatcttcggcgttgtaaggttaagcctcacggt  <  1:2876938‑M2/100‑76 (MQ=255)
                                                                                |                                                                                                   
AATGAACCGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCG  >  NC_000913/4040401‑4040580

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.