| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4325861 = | 148 (1.420) | 201 (2.660) | 78/130 | NT | 69.8% | noncoding (60/583 nt) | REP325 (repetitive extragenic palindromic) element; contains 12 REP sequences | REP325 (repetitive extragenic palindromic) element; contains 12 REP sequences |
| ? | NC_000913 | = 4374507 | 66 (0.870) | noncoding (10/99 nt) | RIP329 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site | RIP329 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site | |||||
Only 100 of 603 total aligned reads displayed.
GAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCATTGCCGGATGCG > NC_000913/4325762‑4325960 | gtaaacgccttatccggcctacggagggtgcgggaatttgtaGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATgcggc > 2:1649227‑M1/43‑100 (MQ=255) gtaaacgccttatccggcctacggagggtgcgggaatttgtaGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATgcggc > 1:387261‑M1/43‑100 (MQ=255) catatgaataattaaaggttatgcaacgggcaaagattaaacttcccagtttaatgacaggttgctgtacttgcgtttgttgctcttgccggatgcaGCg > 1:1046711‑M1/98‑100 (MQ=255) catatgaataattaaaggttatgcaacgggcaaagattaaacttcccagtttaatgacaggttgctgtacttgcgtttgttgctcttgccggatgcaGCg < 2:2705012‑M1/3‑1 (MQ=255) gCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGt > 1:1453550/1‑100 (MQ=255) acgccgtatccggcctacggagggtgcgggaatttgtaGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATgcggc > 1:1222661‑M1/39‑96 (MQ=255) cgccttatccggcctacggagggtgcgggaatttgtaAGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTaaa < 1:1556509‑M1/63‑1 (MQ=255) gccttatccggcctacggagggtgcgggaatttgtaGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGCCGTAAAc > 2:1524251‑M1/37‑100 (MQ=255) gaataattaaaggttatgcaacgggcaaagattaaacttcccagtttaatgacaggttgctgtacttgcgtttgttgctcttgccggatgcaGCGTAAAc < 2:2332761‑M1/8‑1 (MQ=255) gTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAAc > 2:1014227/1‑100 (MQ=255) ccttatccggcctacggagggtgcgggaatttgtaGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACg < 1:2795789‑M1/65‑1 (MQ=255) ccttatccggcctacggagggtgcgggaatttgtaGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACg < 1:1515912‑M1/65‑1 (MQ=255) aataattaaaggttatgcaacgggcaaagattaaacttcccagtttaatgacaggttgctgtacttgcgtttgttgctcttgccggatgcaGCGTAAACg < 1:2222894‑M1/9‑1 (MQ=255) tAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGc > 2:358062/1‑100 (MQ=255) aaGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGcc < 1:1748573/100‑1 (MQ=255) gtgtAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCGGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCtt > 2:2884952/1‑100 (MQ=255) taaaggttatgcaacgggcaaagattaaacttcccagtttaatgacaggttgctgtacttgcgtttgttgctcttgccggatgccGCGCAAACGCTTTAt < 1:2651055‑M1/15‑1 (MQ=255) taaaggttatgcaacgggcaaagattaaacttcccagtttaatgacaggttgctgtacttgcgtttgttgctcttgccggatgcaGCGTAAACGCCTTAt < 1:2423472‑M1/15‑1 (MQ=255) ccggcctacggagggtgcgggaatttgtaGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTAt < 2:116025‑M1/71‑1 (MQ=255) cggcctacggagggtgcgggaatttgtaGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATc > 2:1447847‑M1/29‑100 (MQ=255) aaaggttatgcaacgggcaaagattaaacttcccagtttaatgacaggttgctgtacttgcgtttgttgctcttgccggatgcaGCTTAAACGCCttaac > 2:1979764‑M1/85‑98 (MQ=255) aaggttatgcaacgggcaaagattaaacttcccagtttaatgacaggttgctgtactagcgtttgttgctcttgccggatgcaGCGTAAACGCCTTAtcn > 1:1127095‑M1/84‑99 (MQ=255) aggttatgcaacgggcaaagattaaacttcccagtttaatgacaggttgctgtacttgcgtttgttgctcttgccggatgcaGCGTAAACGCCTTATCCg < 2:1693944‑M1/18‑1 (MQ=255) ttCGAAATTTATGCGGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCgg < 1:1997790/100‑1 (MQ=255) ttCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCGTATCCgg > 1:484859/1‑100 (MQ=255) ggttatgcaacgggcaaagattaaacttcccagtttaatgacaggttgctgtacttgcgtttgttgctcttgccggatgcaGCGTAAACGCCTTATCCgg < 1:1491617‑M1/19‑1 (MQ=255) ggttatgcaacgggcaaagattaaacttcccagtttaatgacaggttgctgtacttgcgtttgttgctcttgccggatgcaGCGTAAACGCCTTATCCgg < 2:767186‑M1/19‑1 (MQ=255) ggttatgcaacgggcaaagattaaacttcccagtttaatgacaggttgctgtacttgcgtttgttgctcttgccggatgcaGCGTAAACGCCTTATCCgg > 1:2593661‑M1/82‑100 (MQ=255) tacggagggtgcgggaatttgtaGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGcc > 2:125243‑M1/24‑100 (MQ=255) acggagggtgcgggaatttgtaGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACTGTTTCCGGATGCGGCGTAAACACCTTATCCGGCCt < 2:490748‑M1/78‑1 (MQ=255) acggagggtgcgggaatttgtaGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCt > 1:902075‑M1/23‑100 (MQ=255) tgcaacgggcaaagattaaacttcccagtttaatgacaggttgctgtacttgcgtttgttgctcttgccggatgcaGCGTAAACGCCTTATCCGGCCTAc < 1:520051‑M1/24‑1 (MQ=255) gagggtgcgggaatttgtaGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACg < 2:1899221‑M1/81‑1 (MQ=255) tttATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACgg > 2:1508036/1‑100 (MQ=255) nggtgcgggaatttgtaGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCctaccga < 1:1179436‑M1/83‑4 (MQ=255) gggtgcgggaatttgtaGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACTGTTGGCGGATGCGGCGTAAACGCCTTATCCGGCCTACgg < 2:2658538‑M1/82‑1 (MQ=255) gggtgcgggaatttgtaGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGa < 2:831398‑M1/83‑1 (MQ=255) gtgcgggaatttgtaGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAgg < 1:2093567‑M1/85‑1 (MQ=255) gatctaaaggttaaacttcccggtttaatgacaggttgctgtacttgcgtttgttgctcttgccggatgcaGCGTAAACGCCTTATCCGGCCTACGGAgg > 2:87255‑M1/72‑100 (MQ=255) ataCAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGGCTACGGAg > 1:1258985/1‑99 (MQ=255) taCAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAggg < 1:322434/100‑1 (MQ=255) gcgggaatttgtaGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTCAACGCCTTATCCGGCCTACGGAGGGt < 1:2298003‑M1/87‑1 (MQ=255) ggaatttgtaGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTCAACGCCTTATCCGGGCTACGGAGGGTGCg < 1:851077‑M1/90‑1 (MQ=255) gATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCg > 1:2181669/1‑100 (MQ=255) aagattaaacttcccagtttaatgacaggttgctgtacttgcgtttgttgctcttgccggatgcaGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCgg < 2:906374‑M1/35‑1 (MQ=255) aTGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCgg > 1:1842694/1‑100 (MQ=255) tGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCggg < 1:658276/100‑1 (MQ=255) ttaaacttcccagtttaatgacaggttgctgtacttgcgtttgttgctcttgccggatgcaGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAAt < 1:77044‑M1/39‑1 (MQ=255) tgtaGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAAtt > 1:1297734‑M1/5‑100 (MQ=255) taaacttcccagtttaatgacaggttgctgtacttgcgtttgttgctcttgccggatgcaGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAAtt > 2:275467‑M1/61‑100 (MQ=255) aaacttcccagtttaatgacaggttgctgtacttgcgtttgttgctcttgccgggtgcaGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAAttt < 1:568666‑M1/41‑1 (MQ=255) aaacttcccagtttaatgacaggttgctgtacttgcgtttgttgctcttgccggatgcaGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAAttt < 2:2852693‑M1/41‑1 (MQ=255) aaacttcccagtttaatgacaggttgctgtacttgcgtttgttgctcttgccggatgcaGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAAttt < 2:158980‑M1/41‑1 (MQ=255) aaactgggaagtttaatgacaggttgctgtacttgcgtttgttgctcttgccggatgcaGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAAtt < 1:1099518‑M1/40‑1 (MQ=255) ttcccagtttaatgacaggttgctgtacttgcgtttgttgctcttgccggatgcaGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAg > 1:23377‑M1/56‑100 (MQ=255) gatcttAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAgg < 1:6870/95‑1 (MQ=255) ccTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAgg < 2:2097577/100‑1 (MQ=38) gATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCt > 2:1700230/1‑100 (MQ=38) cagtttaatgacaggttgctgtacttgcgtttgttgctcttgccggatgcaGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCt < 1:27607‑M1/49‑1 (MQ=255) aTAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGCGGGTGCGGGAATTTGTAGGCCt > 1:987581/1‑99 (MQ=25) aTAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTg < 2:2459776/100‑1 (MQ=38) tAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAggagatc > 2:6870/1‑95 (MQ=255) ttaatgacaggttgctgtacttgcgtttgttgctcttgccggatgcaGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATa > 1:2032886‑M1/48‑100 (MQ=255) actcttaaGCGTCGCGTCAGGCTTTCGGTCCTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATa < 1:1638115/91‑1 (MQ=11) cgcgcgAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGa > 2:629060/1‑100 (MQ=38) tgacaggttgctgtacttgcgtttgttgctcttgccggatgcaGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGGATTTgtagacc < 1:1000322‑M1/48‑4 (MQ=255) aggttgctgtacttgcgtttgttgctcttgccggatgcaGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACgcgc > 1:256064‑M1/40‑100 (MQ=255) ggttgctgtacttgcgtttgttgctcttgccggatgcaGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCa < 2:1744996‑M1/62‑1 (MQ=255) aGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACgcgc < 1:2916364/99‑1 (MQ=32) tgctgtacttgcgtttgttgctcttgccggatgcaGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGc < 2:2499988‑M1/65‑1 (MQ=255) tgtacttgcgtttgttgctcttgccggatgcaGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTc < 1:2868789‑M1/68‑1 (MQ=255) gtacttgcgtttgttgctcttgccggatgcaGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCg < 2:2038597‑M1/69‑1 (MQ=255) aTCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGc < 2:111457/100‑1 (MQ=32) tCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCa < 2:263140/100‑1 (MQ=32) tCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCa < 2:2404686/100‑1 (MQ=33) acttgcgtttgttgctcttgccggatgcaGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCa > 1:2388924‑M1/30‑100 (MQ=255) cttgcgtttgttgctcttgccggatgcaGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCAt < 1:812216‑M1/72‑1 (MQ=255) cttgcgtttgttgctcttgccggatgcaGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCAt > 1:1429930‑M1/29‑100 (MQ=255) aGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATc < 1:628680/100‑1 (MQ=32) gctaGTCCGAACTATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGTCTGATAAGACGCGCAAGCGTCg < 1:1689762/92‑1 (MQ=11) cgtttgttgctcttgccggatgcaGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAgg > 1:1354164‑M1/25‑100 (MQ=255) gtttgttgctcttgccggatgcaGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGc > 2:594499‑M1/24‑100 (MQ=255) gtttgttgctcttgccggatgcaGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGc > 2:1401928‑M1/24‑100 (MQ=255) aGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGc < 2:1842703/100‑1 (MQ=33) tgctcttgccggatgcaGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAgtctg < 2:2061547‑M1/83‑3 (MQ=255) gctcttgccggatgcaGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGc < 2:2294438‑M1/84‑1 (MQ=255) gctcttgccggatgcaGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGc < 2:105667‑M1/84‑1 (MQ=255) ctcttgccggatgcaGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGTTAAGACGCGCACGCGTCGCATAAGGCagtgg < 1:2694216‑M1/82‑3 (MQ=255) ctcttgccggatgcaGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCa < 2:2214887‑M1/85‑1 (MQ=255) cttgccggatgcaGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCAcc < 2:2152190‑M1/87‑1 (MQ=255) tGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCAt < 2:307019/100‑1 (MQ=31) gccggatgcaGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTATGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGcaccgt < 1:2463014‑M1/89‑3 (MQ=255) gccggatgcaGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGGATCAGGCAGTCGGCAcc < 1:616466‑M1/87‑1 (MQ=255) gCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCAtt > 2:120224/1‑100 (MQ=32) gatgcaGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCATTGCCg > 2:1311209‑M1/7‑100 (MQ=255) gatgcaGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCATTGCCg > 2:2579788‑M1/7‑100 (MQ=255) caGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTTGGCACCATTGCCGGATg < 1:1887177‑M1/98‑1 (MQ=255) aGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCATTGCCGGATgc < 2:2798311‑M1/99‑1 (MQ=255) aGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCATTGCCGGATgc < 1:271679‑M1/99‑1 (MQ=255) GCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCATTGCCGGATgcg < 2:544210‑M1/100‑1 (MQ=255) | GAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCATTGCCGGATGCG > NC_000913/4325762‑4325960 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |