BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4636324 =	88 (0.850)	6 (0.060)	4/164	NT	6.6%	coding (318/690 nt)	creB	response regulator in two‑component regulatory system with CreC
*	?	NC_000913	4636375 =	90 (0.940)	6 (0.060)	4/164	NT	6.6%	coding (369/690 nt)	creB	response regulator in two‑component regulatory system with CreC
Rejected: Frequency below cutoff threshold.

Only 100 of 117 total aligned reads displayed.

CCGGCGTTACCTGTACTGTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTG  >  NC_000913/4636226‑4636423

tcagcgctaatggcgtgtcaaaccagctgatctgcgccgcgggttcattcaattcaaaatgtccaatacggatgacgggagacggcgtcgagaacttctt                                                                                                    >  2:2030314‑M1/99‑100 (MQ=255)

 cagcgctaatggcgtgtcaaaccggctgatctgcgccgcgggttcattcaattcaaaatgtccaaaactgatgatgggagacggcgacgagaagttctt                                                                                                    <  1:11064‑M1/2‑1 (MQ=255)

 cagcgctaatggcgtgtcaaaccagctgatctgcgccgcgggttcattcaattcaaaatgtccaatacggatgacgggagacggcgtcgagaacttcttc                                                                                                   >  2:2493760‑M1/98‑100 (MQ=255)

 cGGCGTTACCTGTACTGTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAATCGTTTTc                                                                                                   <  1:2286357/100‑1 (MQ=255)

 cGGCGTTACCTGTACTGTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTc                                                                                                   <  2:107047/100‑1 (MQ=255)

  agcgctaatggcgtgtcaaaccagctgatctgcgccgcgggttcattcaattcaaaatgtccaatacggatgacgggagacggcgtcgagaacttcTTCa                                                                                                  <  1:103587‑M1/4‑1 (MQ=255)

  agcgctaatggcgtgtcaaaacagctgatctgcgacgcgggttcattcagttcaatatgtgtaatacggatgacgggagacggcgtcgagaacttcttc                                                                                                   <  1:2390894‑M1/3‑1 (MQ=255)

   gctctaatggcctctcaaaccagcttatctgcgccgttggttcattcaattcaaaatgtccaatacggatgacgggagacggcgtcgagaacttcTTCa                                                                                                  >  1:1127697‑M1/96‑99 (MQ=255)

   gcgctaatggcgcgtcaaaccagctgatctgcgccgcgggttcattcaattcaaaatgtccaatacggatgacgggagacggcgtcgagaacttcTTCAc                                                                                                 <  2:1397689‑M1/5‑1 (MQ=255)

   gCGTTACCTGTACTGTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCAc                                                                                                 >  2:350827/1‑100 (MQ=255)

    cgctaatggcgtgtcaaaccagctgatctgcgccgcgggttcattcaattcaaaatgtccaatacggatgacgggagacggcgtcgagaacttcTTCAcc                                                                                                >  2:1369006‑M1/95‑100 (MQ=255)

     gctaatggcgtgtcaaaccagctgatctgcgccgcgggttcattcaattcaaaatgtccaatacggatgacgggagacggcgtcgagaacttcTTCAccc                                                                                               <  2:2907814‑M1/7‑1 (MQ=255)

     gctaatggcgtgtcaaaccagctgatctgcgccgcgggttcattcaattcaaaatgtccaatacggatgacgggagacggcgtcgagaacttcTTCAccc                                                                                               >  2:2211909‑M1/94‑100 (MQ=255)

       tACCTGTACTGTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCcg                                                                                             <  2:2180026/100‑1 (MQ=255)

         ccTGTACTGTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCcgcg                                                                                           <  2:598086/100‑1 (MQ=255)

            gTACTGTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAg                                                                                        <  2:1654181/100‑1 (MQ=255)

             tACTGTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAgt                                                                                       >  1:2371597/1‑100 (MQ=255)

               cTGTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAgtgt                                                                                     >  1:2911061/1‑100 (MQ=255)

               cTGTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAgtgt                                                                                     >  2:320811/1‑100 (MQ=255)

               cTGTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTGTTCACTCCGCGAAgtg                                                                                      >  1:1824254/1‑99 (MQ=255)

                 gTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTgc                                                                                   >  2:2026805/1‑100 (MQ=255)

                  ttCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTgcg                                                                                  <  2:504214/100‑1 (MQ=255)

                  ttCCTGACGGCACGAAGTGAAGACGTCGATCGCCTGCTTGGGCTGGAAATTGTTGCTCACTACTACGTGGCTAAACTGTTCTCACCCCGCGAAGTGTgcg                                                                                  <  1:2058232/100‑1 (MQ=255)

                    ccTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTgcg                                                                                  >  1:1155260/1‑98 (MQ=255)

                     cggACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTTGGGCTGGAAATTGGTGCGGACGACTACGTGGCTAAACCGTTTTCACCCCGCGACGTGTGCGcc                                                                                <  1:2088988/97‑1 (MQ=255)

                     cTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCa                                                                               <  1:977260/100‑1 (MQ=255)

                      tGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAg                                                                              >  2:583098/1‑100 (MQ=255)

                        aCGGCCGGAAGTGAAGAGGTCGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAggg                                                                            <  1:717630/100‑1 (MQ=255)

                         cGGCCCGAAGTGAAGAGGTCGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGt                                                                           <  2:1998177/100‑1 (MQ=255)

                         cGGCCCGAAGTGAAGAGGTCGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGt                                                                           >  2:883573/1‑100 (MQ=255)

                         cGGCCCGAAGTGAAGAGGTCGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGt                                                                           >  1:2858342/1‑100 (MQ=255)

                           gCCCGAAGTGAAGAGGTCGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTgc                                                                         >  2:1831966/1‑100 (MQ=255)

                           gCCCGAAGTGAAGAGGTCGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTgc                                                                         >  1:329864/1‑100 (MQ=255)

                            cccGAAGTGAAGAGGTCGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTgcg                                                                        <  2:2055887/100‑1 (MQ=255)

                              cGAAGTGAAGAGGTCGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCa                                                                      <  1:1627130/100‑1 (MQ=255)

                                 aGTGAAGAGGTCGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCt                                                                   >  1:2337199/1‑100 (MQ=255)

                                 aGTGAAGAGGTCGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCt                                                                   <  1:533309/100‑1 (MQ=255)

                                    gAAGAGGTCGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTAc                                                                <  2:2064152/100‑1 (MQ=255)

                                    gAAGAGGTCGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTAc                                                                <  2:432380/100‑1 (MQ=255)

                                      agagGTCGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTg                                                              <  2:1766165/100‑1 (MQ=255)

                                      agagGTCGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTg                                                              >  2:1622183/1‑100 (MQ=255)

                                         ggTCGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGt                                                           >  1:1636339/1‑100 (MQ=255)

                                         ggTCGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGt                                                           >  1:2581707/1‑100 (MQ=255)

                                           tCGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCg                                                         >  2:1401128/1‑100 (MQ=255)

                                           tCGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCg                                                         <  2:1400501/100‑1 (MQ=255)

                                            cGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCgg                                                        <  1:352457/100‑1 (MQ=255)

                                             gATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCggg                                                       <  1:883570/100‑1 (MQ=255)

                                             cattcaattcaaaatgtccaatacggatgacgggagacggcgtcgagaacttcTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCggg                                                       >  1:1217548‑M1/54‑100 (MQ=255)

                                              aTCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGt                                                      >  2:2887386/1‑100 (MQ=255)

                                                 gCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTgaa                                                   >  2:1285890/1‑100 (MQ=255)

                                                 gCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTgaa                                                   >  2:2848164/1‑100 (MQ=255)

                                                 gCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTgaa                                                   <  2:2548133/100‑1 (MQ=255)

                                                   cTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTgaaga                                                 <  2:778935/100‑1 (MQ=255)

                                                   attcaaaatgtccaatacggatgacgggagacggcgtcgagaacttcTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTgaaga                                                 >  2:1892710‑M1/48‑100 (MQ=255)

                                                   attcaaaatgtccaatacggatgacgggagacggcgtcgagaacttcTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTgaaga                                                 >  1:1793627‑M1/48‑100 (MQ=255)

                                                    tGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTgaagaa                                                >  2:2726852/1‑100 (MQ=255)

                                                     tcaaaatgtccaatacggatgacgggagacggcgtcgagaacttcTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGaagaag                                               >  1:1178268‑M1/46‑100 (MQ=255)

                                                     gCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGaagaag                                               >  2:2307450/1‑100 (MQ=255)

                                                     gCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGaagaag                                               >  1:218581/1‑100 (MQ=255)

                                                      caaaatgtccaatacggatgacgggagacggcgtcgagaacttcTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGt                                              >  1:1178214‑M1/45‑100 (MQ=255)

                                                         aggCTGGAAATTGGTGCTGTCGACTCCTTGGCTAAACCGTTATCACTCCGCGAGGTGTTCGCCAGGGTCCGCTCCTTACTGCGTCCGGTgaagtgtttc                                            >  1:953340/2‑93 (MQ=255)

                                                           gCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCg                                         >  2:2794391/1‑100 (MQ=255)

                                                           gCTGGAAATTGGTGCCGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCg                                         <  2:2872414/100‑1 (MQ=255)

                                                             tGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGAc                                       >  2:192588/1‑100 (MQ=255)

                                                                 aaTTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGTAGAAGTTCTTGACGCCg                                   >  1:2269343/1‑100 (MQ=255)

                                                                 aaTTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCg                                   >  2:2442364/1‑100 (MQ=255)

                                                                   ttGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGtc                                 <  2:2836228/100‑1 (MQ=255)

                                                                    tGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGtct                                >  1:2598534/1‑100 (MQ=255)

                                                                      ctGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTcc                              <  1:1632535/99‑1 (MQ=255)

                                                                       tGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTccc                             <  2:1907792/100‑1 (MQ=255)

                                                                       tGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTccc                             <  2:2092131/100‑1 (MQ=255)

                                                                        gCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTccca                            >  1:2092118/1‑99 (MQ=255)

                                                                        gCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCg                            >  2:1191063/1‑100 (MQ=255)

                                                                          tGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTc                          >  2:1264443/1‑100 (MQ=255)

                                                                           gacgacTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCa                         >  1:2461231/1‑100 (MQ=255)

                                                                           gacgacTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCa                         >  2:2410776/1‑100 (MQ=255)

                                                                                  aCGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTAt                  >  2:266514/1‑100 (MQ=255)

                                                                                    gTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTg                <  1:8660/100‑1 (MQ=255)

                                                                                    gTGGCGGAACCGTTTTCACCCCGCGAAGTGTGCGCCGGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTGCTCGACGCCGTCTCCCGTCATCCGTAtt                 <  1:889606/99‑1 (MQ=255)

                                                                                     tGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTgg               <  2:1691084/100‑1 (MQ=255)

                                                                                      ggCTAAACCGTTTTCACCCCGCGAAGTGTACGCCAGGGTGCGCACCTTCCTGCGTCGGGTGAAGACGTTCTCGACGGCGACCCCCGTCATCCGTactcg               >  1:2802531/1‑95 (MQ=255)

                                                                                        cTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACa            >  2:1177610/1‑100 (MQ=255)

                                                                                        cTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACa            >  1:2757897/1‑100 (MQ=255)

                                                                                        cTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACa            >  2:1666598/1‑100 (MQ=255)

                                                                                        cTAAACCGTTTTAACCCCGCGAAGTGTACGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGGTCTCGACGCCGTCTCCCGTCATCCGTATTGGAcc            >  1:2746578/1‑99 (MQ=255)

                                                                                         tAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACAt           >  2:2494976/1‑100 (MQ=255)

                                                                                         tAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACAt           >  2:1909368/1‑100 (MQ=255)

                                                                                          aaaCCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACAtt          >  2:2340634/1‑100 (MQ=255)

                                                                                           aaCCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACAttt         <  2:1688237/100‑1 (MQ=255)

                                                                                           aaCCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGCCTCCCGTCATCCGTATTGGACAttt         <  2:2858361/100‑1 (MQ=255)

                                                                                            aCCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACAtttt        >  2:194885/1‑100 (MQ=255)

                                                                                            aCCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACAtttt        <  1:1748969/100‑1 (MQ=255)

                                                                                            aCCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGGCGGGTGAAGAAGTTCTCGACGCCGTCTCGCGTCATCCGTATTGTACAtttt        >  2:726471/1‑100 (MQ=255)

                                                                                             ccGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCATATTGGACATTttg       >  1:1614785/1‑100 (MQ=255)

                                                                                               gTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTttgaa     >  2:412749/1‑100 (MQ=255)

                                                                                               gTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTttgaa     >  1:2407211/1‑100 (MQ=255)

                                                                                                ttttCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTttgaat    >  2:437025/1‑100 (MQ=255)

                                                                                                ttttCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTttgaat    >  2:1700216/1‑100 (MQ=255)

                                                                                                ttttCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTttgaat    <  2:1086526/100‑1 (MQ=255)

                                                                                                 tttCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTttgaatt   <  1:1310151/100‑1 (MQ=255)

CCGGCGTTACCTGTACTGTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTG  >  NC_000913/4636226‑4636423

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.