BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4636324 =	88 (0.850)	6 (0.060)	4/164	NT	6.6%	coding (318/690 nt)	creB	response regulator in two‑component regulatory system with CreC
*	?	NC_000913	4636375 =	90 (0.940)	6 (0.060)	4/164	NT	6.6%	coding (369/690 nt)	creB	response regulator in two‑component regulatory system with CreC
Rejected: Frequency below cutoff threshold.

Only 100 of 135 total aligned reads displayed.

CTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAGCGCTGA  >  NC_000913/4636277‑4636472

cTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTgaaga                                                                                                  <  2:778935/100‑1 (MQ=255)

attcaaaatgtccaatacggatgacgggagacggcgtcgagaacttcTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTgaaga                                                                                                  >  1:1793627‑M1/48‑100 (MQ=255)

 tGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTgaagaa                                                                                                 >  2:2726852/1‑100 (MQ=255)

  tcaaaatgtccaatacggatgacgggagacggcgtcgagaacttcTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGaagaag                                                                                                >  1:1178268‑M1/46‑100 (MQ=255)

  gCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGaagaag                                                                                                >  1:218581/1‑100 (MQ=255)

  gCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGaagaag                                                                                                >  2:2307450/1‑100 (MQ=255)

      aggCTGGAAATTGGTGCTGTCGACTCCTTGGCTAAACCGTTATCACTCCGCGAGGTGTTCGCCAGGGTCCGCTCCTTACTGCGTCCGGTgaagtgtttc                                                                                             >  1:953340/2‑93 (MQ=255)

         cTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGa                                                                                         >  2:307520/1‑100 (MQ=255)

          tGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGAc                                                                                        >  2:192588/1‑100 (MQ=255)

           ggAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACg                                                                                       <  2:1824634/100‑1 (MQ=255)

              aaTTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGTAGAAGTTCTTGACGCCg                                                                                    >  1:2269343/1‑100 (MQ=255)

              aaTTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCg                                                                                    >  2:2442364/1‑100 (MQ=255)

                ttGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGtc                                                                                  <  2:2836228/100‑1 (MQ=255)

                 tGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGtct                                                                                 >  1:2598534/1‑100 (MQ=255)

                   ctGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTcc                                                                               <  1:1632535/99‑1 (MQ=255)

                    tGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTccc                                                                              <  2:2092131/100‑1 (MQ=255)

                    tGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTccc                                                                              <  2:1907792/100‑1 (MQ=255)

                     gCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTccca                                                                             >  1:2092118/1‑99 (MQ=255)

                     gCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTccag                                                                             >  2:1632541/1‑98 (MQ=255)

                     gCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCg                                                                             >  2:1191063/1‑100 (MQ=255)

                       tGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTc                                                                           >  2:1264443/1‑100 (MQ=255)

                        gacgacTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCa                                                                          >  2:2410776/1‑100 (MQ=255)

                                 gTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTg                                                                 <  1:8660/100‑1 (MQ=255)

                                  tGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTgg                                                                <  2:1691084/100‑1 (MQ=255)

                                  tGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTgg                                                                <  1:2404316/100‑1 (MQ=255)

                                   ggCTAAACCGTTTTCACCCCGCGAAGTGTACGCCAGGGTGCGCACCTTCCTGCGTCGGGTGAAGACGTTCTCGACGGCGACCCCCGTCATCCGTactcg                                                                >  1:2802531/1‑95 (MQ=255)

                                    gCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGAc                                                              >  1:1207702/1‑100 (MQ=255)

                                     cTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACa                                                             >  2:1177610/1‑100 (MQ=255)

                                     cTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACa                                                             >  1:2757897/1‑100 (MQ=255)

                                     cTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACa                                                             >  2:1666598/1‑100 (MQ=255)

                                     cTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACa                                                             >  2:1952661/1‑100 (MQ=255)

                                     cTAAACCGTTTTAACCCCGCGAAGTGTACGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGGTCTCGACGCCGTCTCCCGTCATCCGTATTGGAcc                                                             >  1:2746578/1‑99 (MQ=255)

                                      tAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACAt                                                            >  2:1909368/1‑100 (MQ=255)

                                      tAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACAt                                                            >  2:2494976/1‑100 (MQ=255)

                                       aaaCCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACAtt                                                           >  2:2340634/1‑100 (MQ=255)

                                        aaCCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGCCTCCCGTCATCCGTATTGGACAttt                                                          <  2:2858361/100‑1 (MQ=255)

                                         aCCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACAtttt                                                         >  2:194885/1‑100 (MQ=255)

                                         aCCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGGCGGGTGAAGAAGTTCTCGACGCCGTCTCGCGTCATCCGTATTGTACAtttt                                                         >  2:726471/1‑100 (MQ=255)

                                          ccGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCATATTGGACATTttg                                                        >  1:1614785/1‑100 (MQ=255)

                                          acttcttcacccgacgcagtaaggtgcgcaccctggcgcacacttcgcggggtgaaGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTttg                                                        >  1:1178214‑M2/57‑100 (MQ=255)

                                           cttcttcacccgacgcagtaaggtgcgcaccctggcgcacacttcgcggggtgaaGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTttga                                                       >  1:1178268‑M2/56‑100 (MQ=255)

                                           cttcttcacccgacgcagtaaggtgcgcaccctggcgcacacttcgcggggtgaaGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTttga                                                       >  2:2138172‑M2/56‑100 (MQ=255)

                                            gTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTttgaa                                                      >  2:412749/1‑100 (MQ=255)

                                            gTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTttgaa                                                      >  1:2407211/1‑100 (MQ=255)

                                             ttttCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTttgaat                                                     >  2:437025/1‑100 (MQ=255)

                                             ttttCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTttgaat                                                     >  2:1700216/1‑100 (MQ=255)

                                             tcttcacccgacgcagtaaggtgcgcaccctggcgcacacttcgcggggtgaaGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTttgaat                                                     >  2:1892710‑M2/54‑100 (MQ=255)

                                             tcttcacccgacgcagtaaggtgcgcaccctggcgcacacttcgcggggtgaaGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTttgaat                                                     >  1:1793627‑M2/54‑100 (MQ=255)

                                              tttCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTttgaatt                                                    <  1:1310151/100‑1 (MQ=255)

                                               TTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTttgaattg                                                   >  2:892037‑M1/1‑100 (MQ=255)

                                                  ACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGGCATTTtgaattgaat                                                <  1:30002‑M1/100‑1 (MQ=255)

                                                  ACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTtgaattgaat                                                >  2:2581722‑M1/1‑100 (MQ=255)

                                                  ACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTtgaattgaat                                                >  2:1887884‑M1/1‑100 (MQ=255)

                                                  ACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTtgaattgaat                                                >  2:1886382‑M1/1‑100 (MQ=255)

                                                   cccgacgcagtaaggtgcgcaccctggcgcacacttcgcggggtgaaGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATtgaatg                                               >  1:1217548‑M2/48‑100 (MQ=255)

                                                   CCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATtgaatg                                               >  1:2811998‑M1/1‑100 (MQ=255)

                                                   CCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATtgaatg                                               <  1:1392861‑M1/100‑1 (MQ=255)

                                                   CCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATtgaatg                                               >  2:1008703‑M1/1‑100 (MQ=255)

                                                   CCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATtgaatg                                               <  2:1687416‑M1/100‑1 (MQ=255)

                                                      cgcgGAGTGTGCGCCACAGCGCTCACCTTGCTGCGGCGCCTGAAGAAGGTCTCGAAGCCGTATCCCGTCATCCGTATTGGACATTTTGAATTGAATGAAc                                            <  1:2393439/100‑1 (MQ=255)

                                                       gcgAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAAcc                                           <  2:2046295/100‑1 (MQ=255)

                                                       gcgAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGGCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAAcc                                           <  1:1220268/100‑1 (MQ=255)

                                                           aGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCcgcg                                       <  1:1423488/100‑1 (MQ=255)

                                                           aGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCcgag                                       >  1:1764560/1‑98 (MQ=255)

                                                            gtgtGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCgcgg                                      >  1:1817547/1‑100 (MQ=255)

                                                            gtgtGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCgcgg                                      >  2:537096/1‑100 (MQ=255)

                                                             tgtgCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCgcggc                                     <  1:2307435/100‑1 (MQ=255)

                                                              gtgCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCgcggcg                                    >  1:2636333/1‑100 (MQ=255)

                                                               tgCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGgcgc                                   <  2:944091/100‑1 (MQ=255)

                                                                gcgcCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCa                                  <  2:1481824/100‑1 (MQ=255)

                                                                 cgcCAGGGTGCGCACGTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGGCTCCCGTCAACAGCATGGGACATTTTGAATTGAATGAACCCGCGGCGCa                                  <  1:2464268/99‑1 (MQ=255)

                                                                 cgcCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAg                                 <  1:530258/100‑1 (MQ=255)

                                                                     aGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCa                             >  1:2846157/1‑100 (MQ=255)

                                                                      gggTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAg                            <  1:2424073/100‑1 (MQ=255)

                                                                      gggTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAg                            >  2:22849/1‑100 (MQ=255)

                                                                       ggTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGc                           <  1:1622177/100‑1 (MQ=255)

                                                                           cgcACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGt                       <  2:280447/100‑1 (MQ=255)

                                                                            gcACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGtt                      <  1:862354/100‑1 (MQ=255)

                                                                            gcACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGt                       <  1:633424/99‑1 (MQ=255)

                                                                             cACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGttt                     >  1:868442/1‑100 (MQ=255)

                                                                             cACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGttt                     >  2:364626/1‑100 (MQ=255)

                                                                             cACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGttt                     >  2:2789030/1‑100 (MQ=255)

                                                                              aCCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTg                    <  1:2741820/100‑1 (MQ=255)

                                                                               ccTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGa                   >  2:205582/1‑100 (MQ=255)

                                                                                cTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGac                  <  1:583095/100‑1 (MQ=255)

                                                                                  tACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGacac                <  2:422147/100‑1 (MQ=255)

                                                                                    cTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGc              >  2:2781005/1‑100 (MQ=255)

                                                                                    cTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGc              <  2:2174267/100‑1 (MQ=255)

                                                                                         tCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTa         <  2:2141334/100‑1 (MQ=255)

                                                                                          cGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAg        <  1:1915284/100‑1 (MQ=255)

                                                                                           gggtgaaGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAgc       <  2:2907814‑M2/93‑1 (MQ=255)

                                                                                            ggtgaaGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAgcg      >  2:1369006‑M2/7‑100 (MQ=255)

                                                                                             gtgaaGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACGCGCCATTAgcgc     <  2:1397689‑M2/95‑1 (MQ=255)

                                                                                              tgaaGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAGCGCt    <  1:103587‑M2/96‑1 (MQ=255)

                                                                                              tgaaGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCAACGGCGCAGATAAGCTGGTTTGAGAGGCCATTAgagc     >  1:1127697‑M2/5‑99 (MQ=255)

                                                                                               gaaGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAGCGCTg   <  1:2793141‑M2/97‑1 (MQ=255)

                                                                                               gaaGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAGCGCTg   >  2:2493760‑M2/4‑100 (MQ=255)

                                                                                               gaaGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAGCGCTg   >  2:1019268‑M2/4‑100 (MQ=255)

                                                                                               gaaGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTACACATATTGAACTGAATGAACCCGCGTCGCAGATCAGCTGTTTTGACACGCCATTAGCGCt    <  1:2390894‑M2/96‑1 (MQ=255)

                                                                                                aaGAACTTCTCGTCGCCGTCTCCCATCATCAGTTTTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCCGGTTTGACACGCCATTAGCGCTg   <  1:11064‑M2/97‑1 (MQ=255)

CTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAGCGCTGA  >  NC_000913/4636277‑4636472

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.