New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3227693 =99 (0.950)15 (0.170) 10/156 NT 15.3% intergenic (+26/‑108) ygjI/ygjJ putative transporter/putative periplasmic protein
?NC_000913 3227727 = 80 (0.880)intergenic (+60/‑74) ygjI/ygjJ putative transporter/putative periplasmic protein

Only 100 of 139 total aligned reads displayed.

GCGCCATATTGAAGCGACGCCAGCCAGCAATGTTGATTAAGCAGAATAATAAAAAATGAGCAGGCATTTTCCCTCTTCCTGGATGAGGAGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCTTTAGCTCATGGATTAACACAATGAAATTAATCACTGCACCATGCA  >  NC_000913/3227628‑3227825
                                                                                                   |                                                                                                  
gcgcCATATTGAAGCGACGCCAGCCAGCAATGTTGATTAAGCAGAATAATAAAAAATGAGCAGGCATTTTCCCTCTTCCTGGATGAGGAGAGGGAAAATa                                                                                                    >  1:1253829/1‑100 (MQ=255)
  gcCATATTGAAGCGACGCCAGCCAGCAATGTTGATTAAGCAGAATAATAAAAAATGAGCAGGCATTTTCCCTCTTCCTGGATGAGGAGAGGGAAAATAGt                                                                                                  >  2:143086/1‑100 (MQ=255)
  gcCATATTGAAGCGACGCCAGCCAGCAATGTTGATTAAGCAGAATAATAAAAAATGAGCAGGCATTTTCCCTCTTCCTGGATGAGGAGAGGGAAAATAGt                                                                                                  >  2:522363/1‑100 (MQ=255)
  atgagctaaagaaaaagtacagccttttatcgttgtaattataaaaatataaaggcagaaactATTTTCCCTCTTCCTGGATGAGGAGAGGGAAAATAg                                                                                                   >  1:507450‑M1/64‑99 (MQ=255)
  atgagctaaagaaaaagtacagccttttatcgttgtaattataaaaatataaaggcagaaactATTTTCCCTCTTCCTGGATGAGGAGAGGGAAAATAGt                                                                                                  >  1:152400‑M1/64‑100 (MQ=255)
  atgagctaaagaaaaagtacagccttttatcgttgtaagtataaaaatataaaggcagaaactATTTTCCCTCTTCCTGGATGAGGAGAGGGAAAATAg                                                                                                   >  1:687929‑M1/64‑99 (MQ=255)
       ctaaagaaaaagtacagccttttatcgttgtaattataaaaatataaaggcagaaactATTTTCCCTCTTCCTGGATGAGGAGAGGGAAAATAGTTTCTg                                                                                             >  2:1352941‑M1/59‑100 (MQ=255)
        ttGAAGCGACGCCAGCCAGCAATGTTGATTAAGCAGAATAATAAAAAATGAGCAGGCATTTTCCCTCTTCCTGGATGAGGAGAGGGAAAATAGTTTCTGc                                                                                            <  2:2818633/100‑1 (MQ=255)
          gAAGCGACGCCAGCCAGCAATGTTGATTAAGCAGAATAATAAAAAATGAGCAGGCATTTTCCCTCTTCCTGGATGAGGAGAGGGAAAATAGTTTCTGCCt                                                                                          >  1:1100898/1‑100 (MQ=255)
           aaaataCGCCAATCAGTAATGTTGATTAAAAAAAATAAAAAAAAATGAGCAGGCATTTTCCCTCTTCCTGGATGAGGAGAGGGAAAATAGTTTCTGcc                                                                                           <  1:1426462/93‑1 (MQ=255)
           aaGCGACGCCAGCCAGCAATGTTGATTAAGCAGAATAATAAAAAATGAGCAGGCATTTTCCCTCTTCCTGGATGAGGAGAGGGAAAATAGTTTCTGCCtt                                                                                         <  2:2587722/100‑1 (MQ=255)
            aGCGACGCCAGCCAGCAATGTTGATTAAGCAGAATAATAAAAAATGAGCAGGCATTTTCCCTCTTCCTGGATGAGGAGAGGGAAAATAGTTTCTGCCttt                                                                                        <  1:248375/100‑1 (MQ=255)
            aGCGACGCCAGCCAGCAATGTTGATTAAGCAGAATAATAAAAAATGAGCAGGCATTTTCCCTCTTCCTGGATGAGGAGAGGGAAAATAGTTTCTGCCttt                                                                                        >  1:981566/1‑100 (MQ=255)
            aGCGACGCCAGCCAGCAATGTTGATTAAGCAGAATAATAAAAAATGAGCAGGCATTTTCCCTCTTCCTGGATGAGGAGAGGGAAAATAGTTTCTGCCttt                                                                                        >  2:2314166/1‑100 (MQ=255)
               gACGCCAGCCAGCAATGTTGATTAAGCAGAATAATAAAAAATGAGCAGGCATTTTCCCTCTTCCTGGATGAGGAGAGGGAAAATAGTTTCTGCCTTtata                                                                                     >  2:1878913/1‑100 (MQ=255)
                 cGCCAGCCAGCAATGTTGATTAAGCAGAATAATAAAAAATGAGCAGGCATTTTCCCTCTTCCTGGATGAGGAGAGGGAAAATAGTTTCTGCCTTTatat                                                                                    >  2:1193593/1‑99 (MQ=255)
                 cGCCAGCCAGCAATGTTGATTAAGCAGAATAATAAAAAATGAGCAGGCATTTTCCCTCTTCCTGGATGAGGAGAGGGAAAATAGTTTCTGCCTTTATAtt                                                                                   >  1:1150326/1‑100 (MQ=255)
                  gccagccaGCAATGTTGATTAAGCAGAATAATAAAAAATGAGCAGGCATTTTCCCTCTTCCTGGATGAGGAGAGGGAAAATAGTTTCTGCCTTTATAttt                                                                                  <  2:2808606/100‑1 (MQ=255)
                         agcAATGTTGATTAAGCAGAATAATAAAAAATGAGCAGGCATTTTCCCTCTTCCTGGATGAGGAGAGGGAAAATAGTTTCTGCCTTTATATTTTtata                                                                             <  1:2713146/98‑1 (MQ=255)
                          gcAATGTTGATTAAGCAGAATAATAAAAAATGAGCAGGCATTTTCCCTCTTCCTGGATGAGGAGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAAtt                                                                          <  1:1537683/100‑1 (MQ=255)
                           cAATGTTGATTAAGCAGAATAATAAAAAATGAGCAGGTATTTTCCCTCTTCCTGGATGAGGAGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTa                                                                         <  2:321533/100‑1 (MQ=255)
                             aTGTTGATTAAGCAGAATAATAAAAAATGAGCAGGCATTTTCCCTCTTCCTGGATGAGGAGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACa                                                                       <  2:908915/100‑1 (MQ=255)
                             aTGTTGATTAAGCAGAATAATAAAAAATGAGCAGGCATTTTCCCTCTTCCTGGATGAGGAGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACa                                                                       <  1:1878904/100‑1 (MQ=255)
                              tGTTGATTAAGCAGAATAATAAAAAATGAGCAGGCATTTTCCCTCTTCCTGGATGAGGAGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACaa                                                                      >  2:2832337/1‑100 (MQ=255)
                               gTTGATTAAGCAGAATAATAAAAAATGAGCAGGCATTTTCCCTCTTCCTGGATGAGGAGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACaa                                                                      >  1:1414341/1‑99 (MQ=255)
                               gTTGATTAAGCAGAATAATAAAAAATGAGCAGGCATTTTCCCTCTTCCTGGATGAGGAGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAAc                                                                     <  1:2630633/100‑1 (MQ=255)
                               gTTGATTAAGCAGAATAATAAAAAATGAGCAGGCATTTTCCCTCTTCCTGGATGAGGAGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAAc                                                                     <  2:1640082/100‑1 (MQ=255)
                                  gATTAAGCAGAATAATAAAAAATGAGCAGGCATTTTCCCTCTTCATGGATGAGGAGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGAt                                                                  >  1:2508259/1‑100 (MQ=255)
                                   aTTAAGCAGAATAATAAAAAATGAGCAGGCATTTTCCCTCTTCCTGGATGAGGAGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATa                                                                 >  1:1329983/1‑100 (MQ=255)
                                    ttAAGCAGAATAATAAAAAATGAGCAGGCAGTTTCCCTCTTCCTGGATGAGGAGAGGGAAAATAGTTTCTGCCTGTATATTTTTATAATTACCACGATaa                                                                <  1:1303929/100‑1 (MQ=255)
                                     tAAGCAGAATAATAAAAAATGAGCAGGCATTTTCCCTCTTCCTGGATGAGGAGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATaaa                                                               <  2:2065274/100‑1 (MQ=255)
                                     tAAGCAGAATAATAAAAAATGAGCAGGCATTTTCCCTCTTCCTGGATAAGGAGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATaaa                                                               >  1:2054681/1‑100 (MQ=255)
                                     tAAGCAGAATAATAAAAAATGAGCAGGCATTTTACCTCTTCCTGGATGAGGAGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTGCAACGATaaa                                                               >  1:1910745/1‑100 (MQ=255)
                                       aGCAGAATAATAAAAAATGAGCAGGCATTTTCCCTCTTCCTGGATGAGGAGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAg                                                             >  2:1611668/1‑100 (MQ=255)
                                         cAGAATAATAAAAAATGAGCAGGCATTTTCCCTCTTCCTGGATGAGGAGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAgg                                                            <  1:2382595/99‑1 (MQ=255)
                                         cAGAATAATAAAAAATGAGCAGGCATTTTCCCTCTTCCTGGATGAGGAGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGc                                                           <  1:1460048/100‑1 (MQ=255)
                                         cAGAATAATAAAAAATGAGCAGGCATTTTCCCTCTTCCTGGATGAGGAGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGc                                                           >  1:407030/1‑100 (MQ=255)
                                            aataatAAAAAATGAGCAGGCATTTTCCCTCTTCCTGGATGAGGAGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGt                                                        <  2:2827836/100‑1 (MQ=255)
                                            aataatAAAAAATGAGCAGGCATTTTCCCTCTTCCTGGATGAGGAGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGt                                                        <  2:1703578/100‑1 (MQ=255)
                                                  aaaaaaTGAGCAGGCATTTTCCCTCTTCCTGGATGAGGAGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACtttt                                                  <  2:14886/100‑1 (MQ=255)
                                                  aaaaaaTGAGCAGGCATTTTCCCTCTTCCTGGATGAGGAGAGGGAAAATAGTTGCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACtttt                                                  <  1:1193588/100‑1 (MQ=255)
                                                   aaaaaTGAGCAGGCATTTTCCCTCTTCCTGGATGAGGAGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACttttt                                                 <  2:1691787/100‑1 (MQ=255)
                                                    aaaaTGAGCAGGCATTTTCCCTCTTCCTGTATGAGGAGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTc                                                <  1:1405489/100‑1 (MQ=255)
                                                    aaaaTGAGCAGGCATTTTCCCTCTTCCTGGATGAGGAGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTc                                                <  2:1909441/100‑1 (MQ=255)
                                                       ggcagaaactattttccctctcctcatccaggaagagggaaaatAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCttt                                             >  1:688037‑M2/45‑100 (MQ=255)
                                                       aTGAGCAGGCATTTTCCCTCTTCCTGGATGAGGAGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCttt                                             <  2:365330/100‑1 (MQ=255)
                                                       aTGAGCAGGCATTTTCCCTCTTCCTGGATGAGGAGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCttt                                             <  1:174095/100‑1 (MQ=255)
                                                        tGAGCAGGCATTTTCCCTCTTCCTGGATGAGGAGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCTTTa                                            <  2:1117546/100‑1 (MQ=255)
                                                         gAGCAGGCATTTTCCCTCTTCCTGGATGAGGAGAGGGAAAATAGTTTCTGCCTTTATATTTTTTTAATTACAACGATAAAAGGCTGTACTTTTTCTTTAg                                           <  2:2053830/100‑1 (MQ=255)
                                                         cagaaactattttccctctcctcatccaggaagagggaaaatAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCTTTAg                                           >  2:1352941‑M2/43‑100 (MQ=255)
                                                          aGCAGGCATTTTCCCTCTTCCTGGATGAGGAGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCTTTAGc                                          <  2:761952/100‑1 (MQ=255)
                                                          aGCAGGCATTTTCCCTCTTCCTGGATGAGGAGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCTTTAGc                                          <  1:2233563/100‑1 (MQ=255)
                                                              ggCATTTTCCCTCTTCCTGGATGAGGAGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCTTTAGCTCAt                                      <  2:2740338/100‑1 (MQ=255)
                                                              ggCATTTTCCCTCTTCCTGGATGAGGAGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCTTTAGCTCAt                                      >  2:1274042/1‑100 (MQ=255)
                                                              actattttccctctcctcatccaggaagagggaaaatAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCTTTAGCTCAt                                      >  1:152400‑M2/38‑100 (MQ=255)
                                                               ctattttccctctcctcatccaggaagagggaaaatAGTTTCTGCCTTTATATTTTTATACTTACAACGATAAAAGGCTGTACTTTTTCTTTAGCTCAt                                      >  1:687929‑M2/37‑99 (MQ=255)
                                                               ctattttccctctcctcatccaggaagagggaaaatAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCTTTAGCTCAt                                      >  1:507450‑M2/37‑99 (MQ=255)
                                                                cATTTTCCCTCTTCCTGGATGAGGAGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCTTTAGCTCATgg                                    >  2:550308/1‑100 (MQ=255)
                                                                cATTTTCCCTCTTCCTGGATGAGGAGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCTTTAGCTCATgg                                    <  2:85667/100‑1 (MQ=255)
                                                                 ATTTTCCCTCTTCCTGGATGAGGAGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCTTTAGCTCATGGa                                   <  2:38831‑M1/100‑1 (MQ=255)
                                                                 ATTTTCCCTCTTCCTGGATGAGGAGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCTTTAGCTCATGGa                                   >  1:724677‑M1/1‑100 (MQ=255)
                                                                  TTTTCCCTCTTCCTGGATGAGGAGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTCTACTTTTTCTTTAGCTCATGGAt                                  >  2:2471222‑M1/1‑100 (MQ=255)
                                                                   tttccctctcctcatccaggaagagggaaaatAGTTTCTGCCTTTATATTTTTATAATTCAAACGATAAAAGGCTGTACTTTTTCTTTAGCTCATGGAt                                  >  1:1465749‑M2/33‑99 (MQ=255)
                                                                   TTTCCCTCTTCCTGGATGAGGAGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCTTTAGCTCATGGAtt                                 <  2:1411658‑M1/100‑1 (MQ=255)
                                                                   TTTCCCTCTTCCTGGATGAGGAGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCTTTAGCTCATGGAtt                                 >  2:1329988‑M1/1‑100 (MQ=255)
                                                                   TTTCCCTCTTCCTGGATGAGGAGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCTTTAGCTCATGGAtt                                 >  2:433807‑M1/1‑100 (MQ=255)
                                                                    ttccctctcctcatccaggaagagggaaaatAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCTTTAGCTCATGGATTa                                >  2:1385812‑M2/32‑100 (MQ=255)
                                                                    TTCCCTCTTGCTGGATGAGGAGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCTTTAGCTCATGGATTa                                >  1:2462799‑M1/1‑100 (MQ=255)
                                                                      ccctctcctcatccaggaagagggaaaatAGTTTCTGCCTTTATATTTTTATAATTTCTTCGATAAAAGGCTGTACTTTTTTTTTTGCTCATTGTTTaa                               >  1:758858‑M2/30‑99 (MQ=255)
                                                                      ccctctcctcatccaggaagagggaaaatAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAACGGCTGTACTTTTTCTTTAGCTCATGGATTaa                               >  1:2574502‑M2/30‑99 (MQ=255)
                                                                      CCCTCTTCCTGGATGAGGAGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCTTTAGCTCATGGATTAac                              >  1:871931‑M1/1‑100 (MQ=255)
                                                                      CCCTCTTCCTGGATGAGGAGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCTTTAGCTCATGGATTAac                              <  2:2196818‑M1/100‑1 (MQ=255)
                                                                        CTCTTCCTGGATGAGGAGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCTTTAGCTCATGGATTAacac                            <  1:2002759‑M1/100‑1 (MQ=255)
                                                                        CTCTTCCTGGATGAGGAGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCTTTAGCTCATGGATTAacac                            <  1:2732915‑M1/100‑1 (MQ=255)
                                                                         tctcctcatccaggaagagggaaaatAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTTTTTATCTCATGGATTAAcaca                           >  1:1139324‑M2/27‑100 (MQ=255)
                                                                            tCCTGGATGAGGAGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCTTTAGCTCATGGATTAACACAATg                        <  1:253770/100‑1 (MQ=255)
                                                                            tCCTGGATGAGGAGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCTTTAGCTCATGGATTAACACAATg                        >  1:668375/1‑100 (MQ=255)
                                                                            tCCTGGATGAGGAGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCTTTAGCTCATGGATTAACACAATg                        >  2:401979/1‑100 (MQ=255)
                                                                            tCCTGAATGAGGAGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAAAGATAAAAGGCTGTACTTTTTCTTTAGCTCATGGATTAACACAATg                        <  1:300837/100‑1 (MQ=255)
                                                                              cTGGATGAGGAGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCTTTAGCTCATGGATTAACACAATGaa                      >  1:2547916/1‑100 (MQ=255)
                                                                              cTGGATGAGGAGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCTTTAGCTCATGGATTAACACAATGaa                      >  1:1353028/1‑100 (MQ=255)
                                                                                ggATGAGGAGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCTTTAGCTCATGGATTAACACAATGAAAt                    <  1:2180816/100‑1 (MQ=255)
                                                                                     aggagAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCTTTAGCTCATGGATTAACACAATGAAATTAATc               >  1:2341442/1‑100 (MQ=255)
                                                                                      ggagAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCTTTAGCTCATGGATTAACACAATGAAATTAATCa              >  2:1022964/1‑100 (MQ=255)
                                                                                      ggagAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCTTTAGCTCATGGATTAACACAATGAAATTAATCa              >  2:89592/1‑100 (MQ=255)
                                                                                      ggagAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCTTTAGCTCATGGATTAACACAATGAAATTAATCa              >  1:2063499/1‑100 (MQ=255)
                                                                                        agagggaaaatAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCTTTAGCTCATGGATTAACACAATGAAATTAATCACt            <  2:319859‑M2/89‑1 (MQ=255)
                                                                                         gagggaaaatAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCTTTAGCTCATGGATTAACACAATGAAATTAATCACTg           <  2:540145‑M2/90‑1 (MQ=255)
                                                                                           gggaaaatAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCTTTATCTCATGGATTAACACAATGAAATTAATCACTGCa         >  1:309429‑M2/9‑100 (MQ=255)
                                                                                           gggaaaatAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCTTTAGCTCATGGATTAACACAATGAAATTAATCACTGCa         >  1:336353‑M2/9‑100 (MQ=255)
                                                                                           gggaaaatAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCTTTAGCTCATGGATTAACACAATGAAATTAATCACTGCa         <  2:2759073‑M2/92‑1 (MQ=255)
                                                                                             gaaaatAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCTTTAGCTCATGGATTAACACAATGAAATTAATCACTGCAcc       <  1:482518‑M2/94‑1 (MQ=255)
                                                                                              aaaatAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCTTTAGCTCATGGATTAACACAATGAAATTAATCACTGCAcc       <  1:177228‑M2/94‑1 (MQ=255)
                                                                                              aaaatAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAACGCTGTACTTTTTCTTTAGCTCATGCATTAACACAATGAAATTAATc               <  1:2531553‑M2/86‑1 (MQ=255)
                                                                                               aaatAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCTTTAGCTCATGGATTAACACAATGAAATTAATCACTGCACCAt     >  2:2902094‑M2/5‑100 (MQ=255)
                                                                                                 atAGTTTCTGCCTTTATATTTTTATAATTACAACGATAATAGGCTGTACTTTTTCTTTAGCTCATGGATTAACACAATGAAATTAATCACTGCACCATGc   <  2:2658321‑M2/98‑1 (MQ=255)
                                                                                                 atAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCTTTAGCTCATGGATTAACACAATGAAATTAATCACTGCACCATGc   <  1:2424142‑M2/98‑1 (MQ=255)
                                                                                                 atAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCTTTAGCTCATGGATTAACACAATGAAATTAATCACTGCACCATGc   <  2:365593‑M2/98‑1 (MQ=255)
                                                                                                 atAGTTTCTGCCTTTATATTTTTATAATTACAACAATAAAAGGCTGTACTTTTTCTTTAGCTCATGGATTAACACAATGAAATTAATCACTGCACCATGc   <  1:869706‑M2/98‑1 (MQ=255)
                                                                                                  tAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCTTTAGCTCATGGATTAACACAATGAAATTAATCACTGCACCATGCa  <  1:1913326‑M2/99‑1 (MQ=255)
                                                                                                   |                                                                                                  
GCGCCATATTGAAGCGACGCCAGCCAGCAATGTTGATTAAGCAGAATAATAAAAAATGAGCAGGCATTTTCCCTCTTCCTGGATGAGGAGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCTTTAGCTCATGGATTAACACAATGAAATTAATCACTGCACCATGCA  >  NC_000913/3227628‑3227825

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.