New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 453413997 (0.930)15 (0.160) 7/158 NT 14.6% intergenic (‑86/+291) yjhX/yjhZ UPF0386 family protein/pseudogene, rimK paralog, C‑terminal fragment
?NC_000913 = 4534160 89 (0.970)intergenic (‑107/+270) yjhX/yjhZ UPF0386 family protein/pseudogene, rimK paralog, C‑terminal fragment
Rejected: Frequency below cutoff threshold.

Only 100 of 125 total aligned reads displayed.

CCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTAGTTATAGGAGGG  >  NC_000913/4534063‑4534256
                                                                                                 |                                                                                                
ccTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAac                                                                                                <  2:958236‑M2/100‑3 (MQ=255)
 cTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAact                                                                                               >  1:165163‑M2/1‑97 (MQ=255)
  tATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAactg                                                                                              <  1:2556685‑M2/100‑5 (MQ=255)
  tATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAactg                                                                                              >  1:2417600‑M2/1‑96 (MQ=255)
   aTTTAATAATCATGGGCAAGACGTGCAAACACACCGCGGAGTCGGCATTAAATTTCGGCACATTGCTAATCCGTGCGGCCTGAAAAGGTCGAGGAAGTg                                                                                              >  1:382770/1‑99 (MQ=255)
    tttAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAactgat                                                                                            >  1:557577‑M2/1‑94 (MQ=255)
    tttAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAactgat                                                                                            >  2:2224721‑M2/1‑94 (MQ=255)
     ttAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGGactgatt                                                                                           >  2:2441572‑M2/1‑93 (MQ=255)
     ttAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAactgatt                                                                                           >  2:2317754‑M2/1‑93 (MQ=255)
         tcatcaTGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCg                                                                                       <  1:167763/100‑1 (MQ=255)
         tcatcaTGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCg                                                                                       >  2:134998/1‑100 (MQ=255)
         tcatcaTGTGCAAAACGTGCAAACACACCGCGGTGTCCGCAGTCGATTTTGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCg                                                                                       <  2:242800/100‑1 (MQ=255)
          catcatGTGCAAAACGTGCAAACACACCGCGGTGTCAGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCgg                                                                                      >  1:1082112/1‑100 (MQ=255)
           atcatGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGga                                                                                     <  1:401261/100‑1 (MQ=255)
           atcatGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGga                                                                                     >  1:422993/1‑100 (MQ=255)
           atcatGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGACCGGCCTGAAAAGGTCGGGGAACTGATTATCGga                                                                                     >  1:1527400/1‑100 (MQ=255)
                gtgCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGAtt                                                                                <  2:1385739/100‑1 (MQ=255)
                 tgCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTa                                                                               <  2:109311/100‑1 (MQ=255)
                 tgCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTAGGCGCATTGATACTCAGTCCGGTCTGCAAAGGGCGGGGACCTGATTACCAgataa                                                                                  >  1:2281322/1‑95 (MQ=255)
                  gCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTAc                                                                              <  2:1903125/100‑1 (MQ=255)
                    aaaaCGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACAt                                                                            <  1:277097/100‑1 (MQ=255)
                     aaaCGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACAtt                                                                           >  2:1384761/1‑100 (MQ=255)
                     aaaCGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGAGTACAtt                                                                           >  2:1211221/1‑100 (MQ=255)
                         gTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTcc                                                                       <  1:594225/100‑1 (MQ=255)
                         gTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTcc                                                                       >  2:2500086/1‑100 (MQ=255)
                          tGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTAGCGGATGATTACATTCTCCa                                                                      >  2:2323588/1‑100 (MQ=255)
                           gCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAg                                                                     <  2:987168/100‑1 (MQ=255)
                            cAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGc                                                                    >  1:1457658/1‑100 (MQ=255)
                             aaaCACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAg                                                                     <  1:961872/98‑1 (MQ=255)
                             aaaCACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCa                                                                   >  2:1956216/1‑100 (MQ=255)
                             aaaCACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCa                                                                   <  2:2100579/100‑1 (MQ=255)
                             aaaCACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCa                                                                   <  2:82412/100‑1 (MQ=255)
                             aaaCACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCa                                                                   >  1:815653/1‑100 (MQ=255)
                              aaCACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGG‑‑ctgattatcaatgcgccgaaatcgaatgcggaca                                                                 >  2:2812465‑M2/1‑66 (MQ=255)
                               acacacCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATc                                                                 <  1:134997/100‑1 (MQ=255)
                                 acacCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCaa                                                               <  2:1468844/100‑1 (MQ=255)
                                  cacCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCaaa                                                              >  1:819326/1‑100 (MQ=255)
                                  cacCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCaaa                                                              >  1:2108221/1‑100 (MQ=255)
                                  cacCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCaa                                                               >  1:666494/1‑99 (MQ=255)
                                  cacCGCGGTGTCCGCAGTCGATTTCGGCGCATTGATAATCAGGCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCaaa                                                              <  1:2699178/100‑1 (MQ=255)
                                   acCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACCTTCTCCAGCATcca                                                               >  1:2201156/1‑96 (MQ=255)
                                   acCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAg                                                             <  1:939008/100‑1 (MQ=255)
                                    ccGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGc                                                            >  2:576285/1‑100 (MQ=255)
                                    ccGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGAATGATTACATTCTCCAGCATCAAAg                                                             >  1:143267/1‑99 (MQ=255)
                                     cgcgGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGcc                                                           <  2:1791798/100‑1 (MQ=255)
                                      gcgGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATTATTACATTCTCCAGCATCAAAGcat                                                          >  1:677386/1‑98 (MQ=255)
                                      gcgGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCt                                                          >  2:976633/1‑100 (MQ=255)
                                      gcgGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCt                                                          >  1:2341430/1‑100 (MQ=255)
                                          tgtCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCggg                                                      <  2:763222/100‑1 (MQ=255)
                                          tgtCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCggg                                                      <  2:440969/100‑1 (MQ=255)
                                           gtCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCg                                                        >  1:723399/1‑97 (MQ=255)
                                           gtCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGgt                                                     >  2:843077/1‑100 (MQ=255)
                                             ccGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGgttg                                                   >  1:1214333/1‑100 (MQ=255)
                                               gCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGgttgag                                                 <  2:1356597/100‑1 (MQ=255)
                                               gCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGgttgag                                                 >  2:1502999/1‑100 (MQ=255)
                                                 aTTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGgttgagt                                                <  1:608533/99‑1 (MQ=255)
                                                  ttCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGgttgagttg                                              >  2:2610286/1‑100 (MQ=255)
                                                  ttCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGgttgagttg                                              <  2:2127644/100‑1 (MQ=255)
                                                    cGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGaa                                            <  2:66152/100‑1 (MQ=255)
                                                    cGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGaa                                            <  2:1085636/100‑1 (MQ=255)
                                                     gATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGaaa                                           >  2:1686145/1‑100 (MQ=255)
                                                       tttCGTCGCATTGATAATCAGTCCGGTCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAgg                                         <  1:1039462/100‑1 (MQ=255)
                                                       tttCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAgg                                         >  2:2705946/1‑100 (MQ=255)
                                                         tCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAgg                                         <  1:2829444/98‑1 (MQ=255)
                                                           ggagcATTGATAATCAGTCCGGCCTGAAAAGGTCGGGAAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGatat                                      <  1:1737584/96‑1 (MQ=255)
                                                              gcATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAactgattatcaatgcgccgaaatcgaatgcggaaaccgcggtgtgtttgcacgttttgcacatg                                  <  1:1434121‑M2/100‑65 (MQ=255)
                                                              gcATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTAc                                  <  2:2587313/100‑1 (MQ=255)
                                                               cATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAactgattatcaatgcgccgaaatcgaatgcggacaccgcggtgtgtttgcacgttttgcacatga                                 <  2:2606580‑M2/100‑66 (MQ=255)
                                                               cATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAactgattatcaatgcgccgaaatcgaatgcggacaccgcggtgtgtttgcacgttttgcacatga                                 <  1:1597426‑M2/100‑66 (MQ=255)
                                                               cATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAactgattatcaatgcgccgaaatcgaatgcggacaccgcggtgtgtttgcacgttttgcacatga                                 <  1:838977‑M2/100‑66 (MQ=255)
                                                               cATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAactgattatcaatgcgccgaaatcgaatgcggacaccgcggtgtgtttgcacgttttgcacatg                                  <  1:1471769‑M2/99‑65 (MQ=255)
                                                               cATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAactgattatcaatgcgccgaaatcgaatgcggacaccgaggtgtgtttgcacgttttgcacatg                                  <  2:884182‑M2/99‑65 (MQ=255)
                                                                aTTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAactgattatcaatgcgccgaaatcgaatgcggacaccgcggtgtgtttgcacgttttgcacatgat                                <  2:820387‑M2/100‑67 (MQ=255)
                                                                aTTGATAATCAGTCCGAACGGGAAATGTCTGTTATCTGATGATCTGAGGATGACAGTCTGCAGCATCAAAGCCTTGTGGTTATTTGAAAGTTATGGACgg                                >  1:1697300/1‑100 (MQ=255)
                                                                 ttGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGa                               >  2:2717133/1‑100 (MQ=255)
                                                                   gATAATCAGTCCGGCCTGAAAAGGTCGGGGAactgattatcactgcgccgaaatcgaatgcggacaccgcggtgtgtttgcacgtattgcacatgatgat                             <  1:1833030‑M2/100‑70 (MQ=255)
                                                                   gATAATCAGTCCGGCCTGAAAAGGTCGG‑‑ctgattatcaatgcgccgaaatcgaatgcggacaccgcggtgtgtttgcacgttttgcacatgatgattaa                            <  2:1451291‑M2/100‑72 (MQ=255)
                                                                   gATAATCAGTCCGGCCTGAAAAGGTCG‑‑‑Aactgattatcaatgcgccgaaatcgaatgcggacaccgcggtgtgtttgcacgttttgcacatgatgat                             <  1:1047447‑M2/97‑70 (MQ=255)
                                                                      aaTCAGTCCGGCCTGAAAAGGTCGGGGAactgattatcaatgcgccgaaatcgaatgcggacaccgcggtgtgtttgcacgttttgcacatgatgattaa                          <  2:504501‑M2/100‑73 (MQ=255)
                                                                        tCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAata                        <  1:757759/100‑1 (MQ=255)
                                                                           gTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTa                     >  2:171379/1‑100 (MQ=255)
                                                                            tCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTaa                    <  1:2738830/100‑1 (MQ=255)
                                                                             ncGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAac                   >  1:54435/2‑100 (MQ=255)
                                                                             ccGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAac                   <  2:2582504/100‑1 (MQ=255)
                                                                             ccGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAac                   <  1:851490/100‑1 (MQ=255)
                                                                               ggCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAacac                 >  2:2393885/1‑100 (MQ=255)
                                                                               ggCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAacac                 >  1:1490680/1‑100 (MQ=255)
                                                                                gCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACg                >  1:312789/1‑100 (MQ=255)
                                                                                gCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACg                >  2:142712/1‑100 (MQ=255)
                                                                                 ccTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGt               >  2:2783996/1‑100 (MQ=255)
                                                                                 ccTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGt               >  1:2315075/1‑100 (MQ=255)
                                                                                    gAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTAGt            <  1:250093/100‑1 (MQ=255)
                                                                                     aaaaGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTAGtt           <  1:95856/100‑1 (MQ=255)
                                                                                      aaaGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTAGTta          <  1:208792/100‑1 (MQ=255)
                                                                                       aaGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTAGTtat         >  2:1114528/1‑100 (MQ=255)
                                                                                        atctCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTAGTtata        <  2:2489954/97‑1 (MQ=255)
                                                                                          gTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTAGTTATagg      >  1:2597596/1‑100 (MQ=255)
                                                                                            cGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTAGTtataagat    >  1:2489939/1‑96 (MQ=255)
                                                                                            cGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTAGTTATaggag    >  2:2321141/1‑100 (MQ=255)
                                                                                              gggAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTAGTTATAGGAggg  <  2:1050328/100‑1 (MQ=255)
                                                                                                 |                                                                                                
CCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTAGTTATAGGAGGG  >  NC_000913/4534063‑4534256

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.