BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	474269 =	NA (NA)	10 (0.090)	9/166	NT	NA	intergenic (+17/+32)	amtB/tesB	ammonium transporter/acyl‑CoA thioesterase 2
*	?	NC_000913	474296 =	NA (NA)	10 (0.090)	9/166	NT	NA	intergenic (+44/+5)	amtB/tesB	ammonium transporter/acyl‑CoA thioesterase 2

Only 100 of 120 total aligned reads displayed.

CGGTTGGTCTGCGTGTACCGGAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGTATAAA  >  NC_000913/474170‑474368

cGGTTGGTCTGCGTGTACCGGAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAAc                                                                                                     <  2:1472646/100‑1 (MQ=255)

cGGTTGGTCTGCGTGTACCGGAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAAc                                                                                                     <  1:681671/100‑1 (MQ=255)

cGGTTGGTCTGCGTGTACCGGAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAAc                                                                                                     <  1:2123024/100‑1 (MQ=255)

cGGTTGGTCTGCGTGTACCGGAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAAc                                                                                                     <  1:450342/100‑1 (MQ=255)

      gTCTGCGTGTACCGGAAGAGCAGGAGGGAGAAGGGCTGGATGTAAACAGCCACGGCGAGAATGCTTATAACGCGTAACAAGCACTGCAAAAAACAGCCgg                                                                                               <  2:257075/100‑1 (MQ=255)

      gTCTGCGTGTACCGGAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCgg                                                                                               >  1:1336156/1‑100 (MQ=255)

      gTCTGCGTGTACCGGAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCgg                                                                                               >  2:1825087/1‑100 (MQ=255)

       tCTGCGTGTACCGGAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGa                                                                                              >  1:2945803/1‑100 (MQ=255)

        cTGCGTGTACCGGAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGAc                                                                                             <  2:3154473/100‑1 (MQ=255)

         tGCGTGTACCGGAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACg                                                                                            >  1:1060284/1‑100 (MQ=255)

         tGCGTGTACCGGAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACg                                                                                            >  1:818893/1‑100 (MQ=255)

           cGTGTACCGGAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAACGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGt                                                                                          >  2:2070005/1‑100 (MQ=255)

             tgtgCCGGAAGAGCAGGAGGGAGAAGCGCTGTATGACAACAGCCACGGCGAGAATGCCTATAACGCGTAACCAGCACTGCAAAAAACAGCCGGACGGtt                                                                                         <  2:2873339/99‑1 (MQ=255)

              gtACCGGAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGtttt                                                                                       >  1:2645783/1‑100 (MQ=255)

               tACCGGAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTc                                                                                      <  1:971837/100‑1 (MQ=255)

                aCCGGAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCa                                                                                     <  2:881826/100‑1 (MQ=255)

                aCCGGAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCa                                                                                     <  2:952104/100‑1 (MQ=255)

                 ccGGAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCAc                                                                                    >  1:2386706/1‑100 (MQ=255)

                 ccGGAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCAc                                                                                    <  1:2923435/100‑1 (MQ=255)

                  cGGAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCAcc                                                                                   <  1:1968523/100‑1 (MQ=255)

                   ggAAGAGAAGGAGCGAGAAGGGCTGGATGTAAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCt                                                                                  <  1:215968/100‑1 (MQ=255)

                       gagCAGGGGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCg                                                                               <  2:938989/99‑1 (MQ=255)

                          cAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTa                                                                           >  2:1885547/1‑100 (MQ=255)

                          cAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTa                                                                           >  2:1595722/1‑100 (MQ=255)

                            ggAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTAtt                                                                         <  1:1885559/100‑1 (MQ=255)

                            ggAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGACTATAACGCGTAACAAGCAATGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTAt                                                                          >  2:3050529/1‑99 (MQ=255)

                            ggAGCGAGAAGGGCTGGATGTAAACAGCCACGGCGAGAATGACGATAACGTGGAACAAGAACTGCAAAAACCAGTCGGACGGTTTTCAcccacgcata                                                                           >  2:3040456/1‑90 (MQ=255)

                             gAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTAttt                                                                        >  1:888846/1‑100 (MQ=255)

                             gAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTAttt                                                                        <  1:1451696/100‑1 (MQ=255)

                             atacccaagacggcgtactggttgcctcgaccgttcaggaaggggtgatgcgtaatcacaattaaaaaaaCAGCCGGACGGTTTTCACCTCCGGCTAttt                                                                        >  2:1010671‑M1/71‑100 (MQ=255)

                                cGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTAtttttt                                                                     <  2:847565/100‑1 (MQ=255)

                                cGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTAtttttt                                                                     >  2:614928/1‑100 (MQ=255)

                                 gagaAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTAttttttt                                                                    >  1:427009/1‑100 (MQ=255)

                                 gagaAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTAttttttt                                                                    >  1:1948768/1‑100 (MQ=255)

                                 ccaagacggcgtactggttgcctcgaccgttcaggaaggggtgatgcgtaatcacaattaaaaaaaCAGCCGGACGGTTTTCACCTCCGGCTAttttttt                                                                    >  1:1012183‑M1/67‑100 (MQ=255)

                                  caagacggcgtactggttgcctcgaccgttcaggaaggggtgatgcgtaatcacaattaaaaaaaCAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTa                                                                   >  2:2648163‑M1/66‑100 (MQ=255)

                                  agaAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTa                                                                   >  1:2766453/1‑100 (MQ=255)

                                     gacggcgtactggttgcctcgaccgttcaggaaggggtgatgcgtaatcacaattaaaaaaaCAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAAtt                                                                >  1:1558636‑M1/63‑100 (MQ=255)

                                      gggCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATtg                                                               <  2:376504/100‑1 (MQ=255)

                                       ggCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATtgt                                                              <  2:1852942/100‑1 (MQ=255)

                                        gCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATtgtg                                                             <  1:2325497/100‑1 (MQ=255)

                                         cTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAATAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATtgtgg                                                            <  2:64996/100‑2 (MQ=255)

                                           ggATGTCAACAGCCACGGTGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGAt                                                           <  2:1592798/99‑1 (MQ=255)

                                           ggATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGAtt                                                          <  1:2304377/100‑1 (MQ=255)

                                            gATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTa                                                         <  2:888842/100‑1 (MQ=255)

                                              tGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACg                                                       >  1:269300/1‑100 (MQ=255)

                                                tCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCa                                                     <  1:3181153/100‑1 (MQ=255)

                                                tCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCa                                                     <  1:1795444/100‑1 (MQ=255)

                                                 cAACAGCCACGGCGAGCATGCCTATAACGCGTAAAAAGCACTGAAAAAAAAAGCCGGACGGGTTTCACCTCCGGATATTTTTTTAATTGTGCTTATGCAt                                                    >  1:2946078/1‑100 (MQ=255)

                                                 cAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCAt                                                    <  2:2723678/100‑1 (MQ=255)

                                                  aaCAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAACCAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATc                                                   >  1:2969259/1‑100 (MQ=255)

                                                  aaCAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATc                                                   >  1:1590197/1‑100 (MQ=255)

                                                      gCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCAccc                                               >  1:27386/1‑100 (MQ=255)

                                                      gCCACGGCGAGAATGCCTATAACGCGCAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCAccc                                               >  1:1980377/1‑100 (MQ=255)

                                                       ccACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCAcccc                                              >  1:10420/1‑100 (MQ=255)

                                                          cGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTc                                           >  1:2237474/1‑100 (MQ=255)

                                                           ggCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTcc                                          <  1:463189/100‑1 (MQ=255)

                                                           ggCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTcc                                          <  1:3105784/100‑1 (MQ=255)

                                                                 aaTGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACg                                    <  1:2540264/100‑1 (MQ=255)

                                                                  aTGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACgg                                   <  2:626193/100‑1 (MQ=255)

                                                                    gCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTc                                 <  2:760956/100‑1 (MQ=255)

                                                                    gCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTc                                 >  1:771221/1‑100 (MQ=255)

                                                                    gCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTc                                 >  2:3075321/1‑100 (MQ=255)

                                                                    gCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTc                                 >  2:2644042/1‑100 (MQ=255)

                                                                     aggggtgatgcgtaatcacaattaaaaaaaCAGCCGGACGGTTTTCCCCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCg                                >  2:1093846‑M1/31‑100 (MQ=255)

                                                                       tataACGCGTAACAAGCACTGCAAAAAACAGCCGGTCGGTTTTCACCTCCGGCTATTTTTTTAATTCTGATTACGCATCACCCCTTCCTGAACGGTCGa                               >  1:993834/1‑99 (MQ=255)

                                                                       tataACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAg                              <  1:656162/100‑1 (MQ=255)

                                                                        ggtgatgtgtaatcacaattaaaaaaaTAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAgg                             >  1:1999356‑M1/28‑100 (MQ=255)

                                                                        ataACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAgg                             >  2:499321/1‑100 (MQ=255)

                                                                        ataACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAgg                             >  2:2711131/1‑100 (MQ=255)

                                                                        ataACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAgg                             <  1:2527445/100‑1 (MQ=255)

                                                                        ataACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAgg                             <  2:2298349/100‑1 (MQ=255)

                                                                        ataACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAgg                             <  1:3055970/100‑1 (MQ=255)

                                                                         taACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGc                            >  1:2914937/1‑100 (MQ=255)

                                                                         taACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGc                            >  1:2454004/1‑100 (MQ=255)

                                                                          aaCGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCa                           >  1:2071883/1‑100 (MQ=255)

                                                                          aaCGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATCGTGATTATGCATCACCCCTTCCTGAACGGTCGa                               >  2:2974985/1‑96 (MQ=255)

                                                                            cgcgTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAAc                         <  1:794402/100‑1 (MQ=255)

                                                                             gcgTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAAcc                        >  2:638904/1‑100 (MQ=255)

                                                                              cgTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCa                       >  1:2177248/1‑100 (MQ=255)

                                                                                 aaCAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTa                    >  2:23650/1‑100 (MQ=255)

                                                                                  aCAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTAc                   >  2:1634635/1‑100 (MQ=255)

                                                                                   cAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTAc                   >  1:2595771/1‑99 (MQ=255)

                                                                                   cAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACg                  >  2:445538/1‑100 (MQ=255)

                                                                                   cAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACCAATCACCCCATCATGAACGGTCGAGGCAACCAGTa                    >  2:2597553/1‑98 (MQ=255)

                                                                                      gCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCg               >  1:1111489/1‑100 (MQ=255)

                                                                                      gCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCg               >  2:1245547/1‑100 (MQ=255)

                                                                                        aCTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGCGGCAACCAGTACGCCGTc             >  1:1240808/1‑100 (MQ=255)

                                                                                         cTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCt            <  1:181667/100‑1 (MQ=255)

                                                                                         cTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATAACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCAGTCt            >  2:522344/1‑100 (MQ=255)

                                                                                           gCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCtt           >  1:1987936/1‑99 (MQ=255)

                                                                                           gCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTg          >  1:1575780/1‑100 (MQ=255)

                                                                                            cAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTgg         <  2:427007/100‑1 (MQ=255)

                                                                                             aaaaaaCAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTggg        >  2:2775883‑M1/7‑100 (MQ=255)

                                                                                             aaaaaaCAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTggg        >  1:3075348‑M1/7‑100 (MQ=255)

                                                                                             aaaaaaCAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTggg        >  1:1726992‑M1/7‑100 (MQ=255)

                                                                                              aaacaCAGCCTGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACTGTCAAGGCAACCAGTACGCCGTcttgagt       >  2:148689‑M1/6‑97 (MQ=255)

                                                                                                aaaCAGCCGGACGGTTTTCACATCCGGCTATTTTTTTAAGTGTGATTACCCATCACCCCTTCCTGAACGGTCGAGGTAACCAGTACGCCGTCTTGGGta      >  2:1232818/1‑99 (MQ=255)

                                                                                                 aaCAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGtata    <  1:3148578‑M1/98‑1 (MQ=255)

                                                                                                   cAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGTATaaa  <  2:2914912/100‑1 (MQ=255)

CGGTTGGTCTGCGTGTACCGGAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGTATAAA  >  NC_000913/474170‑474368

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.