New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 474269 =NA (NA)10 (0.090) 9/166 NT NA intergenic (+17/+32) amtB/tesB ammonium transporter/acyl‑CoA thioesterase 2
?NC_000913 474296 = NA (NA)intergenic (+44/+5) amtB/tesB ammonium transporter/acyl‑CoA thioesterase 2

Only 100 of 141 total aligned reads displayed.

GGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGTATAAAACTCACCGCGCACAAAGCCACGTGCGC  >  NC_000913/474198‑474395
                                                                                                  |                                                                                                   
tatacccaagacggcgtactggttgcctcgaccgttcaggaaggggtgatgcgtaatcacaattaaaaaaatagccggaggtgaaaaccgtccggctgtt                                                                                                    <  1:3148578‑M2/2‑1 (MQ=255)
ggAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTAtt                                                                                                    <  1:1885559/100‑1 (MQ=255)
ggAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGACTATAACGCGTAACAAGCAATGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTAt                                                                                                     >  2:3050529/1‑99 (MQ=255)
 gAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTAttt                                                                                                   <  1:1451696/100‑1 (MQ=255)
 gAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTAttt                                                                                                   >  1:888846/1‑100 (MQ=255)
   actcaagacggcgtactggttgccttgacagttcaggaaggggtgatgcgtaatcacaattaaaaaaatagccggaggtgaaaaccgtcaggctgtgttt                                                                                                 >  2:148689‑M2/96‑100 (MQ=255)
    cccaagacggcgtactggttgcctcgaccgttcaggaaggggtgatgcgtaatcacaattaaaaaaatagccggaggtgaaaaccgtccggctgtttttt                                                                                                >  1:1726992‑M2/95‑100 (MQ=255)
    cGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTAtttttt                                                                                                >  2:614928/1‑100 (MQ=255)
    cGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTAtttttt                                                                                                <  2:847565/100‑1 (MQ=255)
     gagaAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTAttttttt                                                                                               >  1:1948768/1‑100 (MQ=255)
     ccaagacggcgtactggttgcctcgaccgttcaggaaggggtgatgcgtaatcacaattaaaaaaaCAGCCGGACGGTTTTCACCTCCGGCTAttttttt                                                                                               >  1:1012183‑M1/67‑100 (MQ=255)
      caagacggcgtactggttgcctcgaccgttcaggaaggggtgatgcgtaatcacaattaaaaaaaCAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTa                                                                                              >  2:353865‑M1/66‑100 (MQ=255)
      caagacggcgtactggttgcctcgaccgttcaggaaggggtgatgcgtaatcacaattaaaaaaaCAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTa                                                                                              >  2:2648163‑M1/66‑100 (MQ=255)
      agaAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTa                                                                                              >  1:2766453/1‑100 (MQ=255)
         gacggcgtactggttgcctcgaccgttcaggaaggggtgatgcgtaatcacaattaaaaaaaCAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAAtt                                                                                           >  1:1558636‑M1/63‑100 (MQ=255)
          gggCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATtg                                                                                          <  2:376504/100‑1 (MQ=255)
             gcgtactggttgcctcgaccgttcaggaaggggtgatgcgtaatcacaattaaaaaaaCAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGa                                                                                       >  1:2305716‑M1/59‑100 (MQ=255)
                gATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTa                                                                                    <  2:888842/100‑1 (MQ=255)
                  tGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACg                                                                                  >  1:2983891/1‑100 (MQ=255)
                  tGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACg                                                                                  >  1:269300/1‑100 (MQ=255)
                    tCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCa                                                                                <  1:3181153/100‑1 (MQ=255)
                     cAACAGCCACGGCGAGCATGCCTATAACGCGTAAAAAGCACTGAAAAAAAAAGCCGGACGGGTTTCACCTCCGGATATTTTTTTAATTGTGCTTATGCAt                                                                               >  1:2946078/1‑100 (MQ=255)
                     cAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCAt                                                                               >  1:2100443/1‑100 (MQ=255)
                      aaCAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAACCAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATc                                                                              >  1:2969259/1‑100 (MQ=255)
                      aaCAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATc                                                                              >  1:1590197/1‑100 (MQ=255)
                          gCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCAccc                                                                          >  1:27386/1‑100 (MQ=255)
                           ccACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCAcccc                                                                         >  1:10420/1‑100 (MQ=255)
                            cgaccgttcaggaaggggtgatgcgtaatcacaattaaaaaaatagccggaggggaaaaccgtccggctgTTTTTTTAATTGTGATTACGCATCACCCCt                                                                        >  2:1093846‑M2/71‑100 (MQ=255)
                              cGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTc                                                                      >  1:2237474/1‑100 (MQ=255)
                               ggCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTcc                                                                     <  1:463189/100‑1 (MQ=255)
                               ggCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTcc                                                                     <  1:3105784/100‑1 (MQ=255)
                                 cGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTg                                                                   <  1:283916/100‑1 (MQ=255)
                                     aaTGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACg                                                               <  1:2540264/100‑1 (MQ=255)
                                     aaTGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACg                                                               <  1:1620187/100‑1 (MQ=255)
                                      aTGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACgg                                                              <  2:626193/100‑1 (MQ=255)
                                        gCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTc                                                            >  1:771221/1‑100 (MQ=255)
                                        gCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTc                                                            <  2:760956/100‑1 (MQ=255)
                                           tataACGCGTAACAAGCACTGCAAAAAACAGCCGGTCGGTTTTCACCTCCGGCTATTTTTTTAATTCTGATTACGCATCACCCCTTCCTGAACGGTCGa                                                          >  1:993834/1‑99 (MQ=255)
                                           tataACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAg                                                         <  1:656162/100‑1 (MQ=255)
                                            ggtgatgtgtaatcacaattaaaaaaaTAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAgg                                                        >  1:1999356‑M1/28‑100 (MQ=255)
                                            ataACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAgg                                                        >  2:2711131/1‑100 (MQ=255)
                                            ataACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAgg                                                        <  1:3055970/100‑1 (MQ=255)
                                            ataACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAgg                                                        >  2:499321/1‑100 (MQ=255)
                                            ataACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAgg                                                        <  1:2527445/100‑1 (MQ=255)
                                            ataACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAgg                                                        >  1:1953998/1‑100 (MQ=255)
                                            ataACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAgg                                                        <  2:2298349/100‑1 (MQ=255)
                                             taACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGc                                                       >  1:2454004/1‑100 (MQ=255)
                                              tgatgcgtaatcacaattaaaaaaaTAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCa                                                      >  1:1312786‑M1/26‑100 (MQ=255)
                                              aaCGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCa                                                      >  1:2071883/1‑100 (MQ=255)
                                              aaCGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATCGTGATTATGCATCACCCCTTCCTGAACGGTCGa                                                          >  2:2974985/1‑96 (MQ=255)
                                                cgcgTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAAc                                                    <  1:794402/100‑1 (MQ=255)
                                                 gcgTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAAcc                                                   >  2:638904/1‑100 (MQ=255)
                                                  cgTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCa                                                  >  1:2177248/1‑100 (MQ=255)
                                                     aaCAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTa                                               >  2:23650/1‑100 (MQ=255)
                                                      aCAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTAc                                              >  2:1634635/1‑100 (MQ=255)
                                                       cAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTAc                                              >  1:2595771/1‑99 (MQ=255)
                                                       cAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACg                                             >  2:445538/1‑100 (MQ=255)
                                                       cAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACCAATCACCCCATCATGAACGGTCGAGGCAACCAGTa                                               >  2:2597553/1‑98 (MQ=255)
                                                        tcacaattaaaaaaatagccggaggtgaaaaccgtccggctgTTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGc                                            >  1:2305716‑M2/43‑100 (MQ=255)
                                                            aattaaaaaaatagccggaggtgaaaaccgtccggctgTTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTc                                        >  1:1558636‑M2/39‑100 (MQ=255)
                                                            aCTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGCGGCAACCAGTACGCCGTc                                        >  1:1240808/1‑100 (MQ=255)
                                                             cTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCt                                       <  1:181667/100‑1 (MQ=255)
                                                               taaaaaaatagccggaggtgaaaaccgtccggctgTTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTg                                     >  2:353865‑M2/36‑100 (MQ=255)
                                                               taaaaaaatagccggaggtgaaaaccgtccggctgTTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTg                                     >  2:2648163‑M2/36‑100 (MQ=255)
                                                               gCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCtt                                      >  1:1987936/1‑99 (MQ=255)
                                                               gCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTg                                     >  1:376227/1‑100 (MQ=255)
                                                                aaaaaaatagccggaggtgaaaaccgtccggctgTTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTgg                                    >  1:1012183‑M2/35‑100 (MQ=255)
                                                                 aaaaacCAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACAAGTACGCCGTCTTggg                                   >  2:2969232‑M1/7‑100 (MQ=255)
                                                                 aaaaaaCAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTggg                                   >  2:2775883‑M1/7‑100 (MQ=255)
                                                                 aaaaaaCAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTggg                                   >  1:3075348‑M1/7‑100 (MQ=255)
                                                                 aaaaaaCAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTggg                                   >  2:976688‑M1/7‑100 (MQ=255)
                                                                 aaaaaaCAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTggg                                   >  1:1726992‑M1/7‑100 (MQ=255)
                                                                  aaacaCAGCCTGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACTGTCAAGGCAACCAGTACGCCGTcttgagt                                  >  2:148689‑M1/6‑97 (MQ=255)
                                                                    aaatagccggaggtgaaaaccgtccggctgTTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGtat                                >  2:1010671‑M2/31‑100 (MQ=255)
                                                                    aaaCAGCCGGACGGTTTTCACATCCGGCTATTTTTTTAAGTGTGATTACCCATCACCCCTTCCTGAACGGTCGAGGTAACCAGTACGCCGTCTTGGGta                                 >  2:1232818/1‑99 (MQ=255)
                                                                         gCCGGACGGTTTTCACCTCTGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGTATAAAAc                           <  1:1825099/100‑1 (MQ=255)
                                                                         gCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTggagatcggaa                           >  1:2222219/1‑91 (MQ=255)
                                                                         gCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGTATAAAAc                           <  1:1750313/100‑1 (MQ=255)
                                                                         gCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGTATAAAAc                           <  2:2839933/100‑1 (MQ=255)
                                                                         gCCGGACGGTTTTCACCTCCGGCTATTTTGTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTTGAGGCAACCAGTACGCCGTCTTGGGTATAAAAc                           <  2:1948756/100‑1 (MQ=255)
                                                                           cGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGTATAAAACTc                         >  2:1255987/1‑100 (MQ=255)
                                                                            ggACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGTATaaa                             <  1:2821438/95‑1 (MQ=255)
                                                                            ggACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGTATAAAACTCa                        >  2:1026934/1‑100 (MQ=255)
                                                                             gatggTTTTCTCCTCCGGCTATTTTTTTAATTGTGATTACGCATCTCCCCTTCCTGATCGGTCGAGGCAACCTGTACTCCGTCTTGGGTATAAAACTc                         <  2:2763313/95‑1 (MQ=255)
                                                                                 gTTTTCACCTCCGGCTATTTTTTTAATTTTTTTTTCGCATCACCCCTTCCTGCACGGTCGCGGCAACCCATACGCCGTCTTGGGTATAAAACTCCCcgc                    >  2:2073469/1‑99 (MQ=255)
                                                                                 gTTTTCACCTCCGGCTATTTTTCTAATTGTGTTTACGGATCACCCCTCCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGTATAAAACTCACcgcg                   <  2:2190495/100‑1 (MQ=255)
                                                                                  ttttCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGTATAAAACTCACCgcgc                  >  2:2344101/1‑100 (MQ=255)
                                                                                        ccTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGTATAAAACTCACCGCGCACAAAg            <  1:996534/100‑1 (MQ=255)
                                                                                         cTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGTATAAAACTCACCGCGCACAAAGc           <  2:1478023/100‑1 (MQ=255)
                                                                                           ccGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACTAACGAGGCAACCAGTACGCCATCTTGGGAATAAAACCGACCGCGCACAAAGc           >  2:1892544/1‑98 (MQ=255)
                                                                                           ccGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGTATAAAACTCACCGCGCACAAAGCCa         <  2:1987924/100‑1 (MQ=255)
                                                                                             ggCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGTATAAAACTCACCGCGCACAAAGCCAcn       <  2:2319417/100‑2 (MQ=255)
                                                                                              gCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGTATAAAACTCACCGCGCACAAAGCCACGt      >  1:3115528/1‑100 (MQ=255)
                                                                                               cTATTTTTTTTTTTTTTATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGTATAAAACTCACCGCGCACAAATCCActtt     >  2:102835/1‑97 (MQ=255)
                                                                                               cTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGTATAAAACTCACCGCGCACAAAGCCACGTg     <  2:2945778/100‑1 (MQ=255)
                                                                                               cTATTTTTTTAATTGTGATTACGCATCACCCATTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGTATAAAACTCACCGCGCACAAAGCCACGTg     >  2:2823696/1‑100 (MQ=255)
                                                                                                tATTTTTTTAATTTTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGTATAAAACTCACCGCGCACAAAGCCACGTgc    >  2:1360237/1‑100 (MQ=255)
                                                                                                tATTTTTTTAATTGTGCTTACGCATCACCGCTTCCTAAATGGTCGAGGCAACCAATACGCCGTCTTGGGTATGAAACTCATCGCGCACAAAGCCACGTga    <  2:2919712/100‑2 (MQ=255)
                                                                                                tATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGTATAAAACTCACCGCGCACAAAGCCACGTgc    >  2:1799111/1‑100 (MQ=255)
                                                                                                  TTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGTATAAAACTCACCGCGCACAAAGCCACGTgcgc  >  1:2610913‑M2/1‑100 (MQ=255)
                                                                                                  |                                                                                                   
GGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGTATAAAACTCACCGCGCACAAAGCCACGTGCGC  >  NC_000913/474198‑474395

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.