New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2282890NA (NA)6 (0.050) 6/164 NT NA noncoding (4/34 nt) REP159 (repetitive extragenic palindromic) element; contains 1 REP sequences REP159 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 = 2282920 NA (NA)noncoding (34/34 nt) REP159 (repetitive extragenic palindromic) element; contains 1 REP sequences REP159 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 150 total aligned reads displayed.

CGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCG  >  NC_000913/2282793‑2282989
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cgcgCTTAATTGCTGAATAAGTTGTAAAAAGCCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGg                                                                                                    <  1:600128‑M1/99‑2 (MQ=255)
 gcgcTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGgcc                                                                                                  <  2:1088149‑M1/100‑4 (MQ=255)
  cgcTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGgcca                                                                                                 >  2:3172923‑M1/1‑96 (MQ=255)
  cgcTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGgcca                                                                                                 >  1:1169980‑M1/1‑96 (MQ=255)
   gcTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGgcctg                                                                                                <  1:2190121‑M1/100‑6 (MQ=255)
   gcTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGgccag                                                                                                <  2:3190317‑M1/100‑6 (MQ=255)
    cTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGgccaga                                                                                               <  2:1525532‑M1/100‑7 (MQ=255)
      tAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATa                                                                                             <  1:580803/100‑1 (MQ=255)
       aaTTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATaa                                                                                            >  2:2867069/1‑100 (MQ=255)
       aaTTGCTGAATAAGTTCTAAAAAACCCCGCTCCGGCGGGGTCTTTTGTATCTACAGATTCTGCCTGATTACGGTATTGCTATTTTTTGCAGGCCCGATaa                                                                                            >  2:3150977/1‑100 (MQ=255)
        aTTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAg                                                                                           >  2:1125765/1‑100 (MQ=255)
          tGCTGAATAAGTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAgg                                                                                          >  2:1794236/1‑99 (MQ=255)
          tGCTGAATAAGTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGc                                                                                         >  1:1025570/1‑100 (MQ=255)
            cTGAATAAGTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCg                                                                                        <  1:1508066/99‑1 (MQ=255)
             tGAATAAGTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGtt                                                                                      >  1:345617/1‑100 (MQ=255)
              gAATAAGTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTc                                                                                     <  2:878401/100‑1 (MQ=255)
              cgtttctttGTAAAAATCCCCGCTCCGGCTGGGTTTTTTGTATCTGCAGATTACGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTc                                                                                     <  1:233772/93‑1 (MQ=255)
                 tAAGTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCAcg                                                                                  >  2:1846188/1‑100 (MQ=255)
                   aGTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCAcgcc                                                                                >  1:1561811/1‑100 (MQ=255)
                   aGTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCAcgcc                                                                                <  1:735104/100‑1 (MQ=255)
                   aGTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCAcgcc                                                                                >  1:3018712/1‑100 (MQ=255)
                    gatacaaaaaaCCCCGCCGGAGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCAcgccg                                                                               >  1:2046837/6‑100 (MQ=37)
                    gTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCAcgccg                                                                               >  1:2453574/1‑100 (MQ=255)
                    gTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCAcgccg                                                                               >  1:2386617/1‑100 (MQ=255)
                     ttGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCagatcgg                                                                              >  2:233770/1‑94 (MQ=255)
                     ttGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCAcgccgc                                                                              <  2:1713130/100‑1 (MQ=255)
                       gTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCAT                                                                            <  1:639619‑M2/100‑1 (MQ=255)
                       gTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCAT                                                                            <  1:744764‑M2/100‑1 (MQ=255)
                         aaaaaaCCCCGCCGGAGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCT                                                                          <  1:1755552‑M2/100‑1 (MQ=255)
                          aaaaaCCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTG                                                                         <  1:1957169‑M2/100‑1 (MQ=255)
                          aaaaaCCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCT                                                                          <  1:3051743‑M2/99‑1 (MQ=255)
                          aaaaaCCCCGCCGGAGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGTCCAGATAAGGCGTTCACGCCGCATC                                                                           <  1:1219795‑M2/98‑1 (MQ=255)
                            aaaCCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGgccagatgcggcgtgaacgccttatctggc                                                                       <  2:687786‑M1/100‑31 (MQ=255)
                            aaaCCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGC                                                                       >  2:20902‑M2/1‑100 (MQ=255)
                            aaaCCCCGCTCCGGCGGGGTTATTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTTCAGGCCAGATAAGGCGTTCACGCCGCACCTGG                                                                        <  2:295181‑M2/99‑1 (MQ=255)
                             aaCCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGgccagatgcggcgtgaacgccttatctggcc                                                                      <  1:980132‑M1/100‑32 (MQ=255)
                               ccccGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGgccagatgcggcgtgaacgccttatctggcct                                                                     <  2:2506230‑M1/99‑33 (MQ=255)
                               ccccGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCAtt                                                                    >  2:2676917/1‑100 (MQ=255)
                               ccccGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCAt                                                                     <  2:388636/99‑1 (MQ=255)
                                cccGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGgccagatgcggcgtgaacgccttatctggcctgc                                                                   <  1:986255‑M1/100‑35 (MQ=255)
                                cccGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTc                                                                   >  2:2204192/1‑100 (MQ=255)
                                cccGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTc                                                                   <  2:2842100/100‑1 (MQ=255)
                                 ccGCTCCGGCGGGGTTTTTTGTCTCTGCAGACTATGCGTGATTACGGCATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCa                                                                  <  2:2188759/100‑1 (MQ=38)
                                 ccGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCa                                                                  <  2:1169974/100‑1 (MQ=255)
                                  cGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGgccagatgcggcgtgaacgccttatctggcctgcaa                                                                 <  1:2888978‑M1/100‑37 (MQ=255)
                                  cGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAg                                                                 <  2:1240537/100‑1 (MQ=255)
                                  cGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAg                                                                 <  1:2951187/100‑1 (MQ=255)
                                   gCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGa                                                                <  1:1282062/100‑1 (MQ=255)
                                   gCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGa                                                                <  1:996145/100‑1 (MQ=255)
                                     tCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAac                                                              <  2:2558588/100‑1 (MQ=255)
                                       cggcggGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAacac                                                            <  1:2267281/100‑1 (MQ=255)
                                        ggcggGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAAcaca                                                           >  1:1718687/1‑100 (MQ=255)
                                        ggcggGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAAcaca                                                           >  1:699305/1‑100 (MQ=255)
                                        ggcggGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAAcaca                                                           <  1:320598/100‑1 (MQ=255)
                                           cggGGTTTTTTGTATCTGCGGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACaaa                                                         >  1:2788279/1‑100 (MQ=255)
                                              ggTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAAcc                                                      <  1:2618162/100‑1 (MQ=255)
                                               gTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCg                                                     <  1:2568858/100‑1 (MQ=255)
                                               gTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCg                                                     >  2:3214882/1‑100 (MQ=255)
                                                 tttttGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGAt                                                   >  1:1555570/1‑100 (MQ=255)
                                                  ttttGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGAtt                                                  <  1:1651097/100‑1 (MQ=255)
                                                  ttttGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGAtt                                                  >  1:1356444/1‑100 (MQ=255)
                                                  ttttGTATCTGCAGATTATGCCTGATTACGGTATTGCGATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGAt                                                   <  1:2021429/99‑1 (MQ=255)
                                                     tGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAAt                                               >  1:1792699/1‑100 (MQ=255)
                                                        aTCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTgc                                            <  1:1444533/100‑1 (MQ=255)
                                                         tCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTgcc                                           <  1:1503429/100‑1 (MQ=255)
                                                         tCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTgcc                                           <  1:1113918/100‑1 (MQ=255)
                                                          cTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTTTTTTTTTTATAAGGCGATCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTgc                                            >  2:1167337/1‑98 (MQ=25)
                                                           tGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTgccgc                                         >  1:3149630/1‑100 (MQ=255)
                                                            gCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTgccgcc                                        >  1:147820/1‑100 (MQ=255)
                                                             cggATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCa                                       <  2:2788255/98‑1 (MQ=255)
                                                             cAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTgccgcc                                        >  2:2441560/1‑99 (MQ=255)
                                                              aGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAg                                      >  1:1066952/1‑100 (MQ=255)
                                                              aGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAg                                      >  1:1131122/1‑100 (MQ=255)
                                                               gATTATGCCTGATTACGGTATTGCTATTTTTTGTATGTTAGATAAGGAGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTgccgcc                                        >  2:1486871/1‑97 (MQ=38)
                                                                    tGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTcc                                >  2:720497/1‑100 (MQ=255)
                                                                       cTGATTACGGAATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGgc                             <  2:2133579/100‑1 (MQ=255)
                                                                        tGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGgcg                            >  1:865033/1‑100 (MQ=255)
                                                                         gATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGgcgc                           >  2:81434/1‑100 (MQ=255)
                                                                            tACTGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGc                        <  1:996057/100‑1 (MQ=255)
                                                                            tACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAGCACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGc                        <  2:2660469/100‑1 (MQ=255)
                                                                            tACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGc                        <  1:3242098/100‑1 (MQ=255)
                                                                            tACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGc                        <  1:2807695/100‑1 (MQ=255)
                                                                             aCGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCa                       >  2:3123309/1‑100 (MQ=255)
                                                                              cGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCaa                      >  1:2475755/1‑100 (MQ=255)
                                                                                gTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAAtt                    >  2:2553671/1‑100 (MQ=255)
                                                                                   ttGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGt                 <  2:2386601/100‑1 (MQ=255)
                                                                                     gCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTcg               >  1:1148973/1‑100 (MQ=255)
                                                                                      cTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTcgc              >  1:2934200/1‑100 (MQ=255)
                                                                                      cTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTcg               >  1:947994/1‑99 (MQ=255)
                                                                                       tATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTcgcg             <  2:1187288/100‑1 (MQ=255)
                                                                                          nttttGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCaa          >  2:2320922/2‑100 (MQ=255)
                                                                                             ttGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCctgcaaaaaatagcaataccgtaatcaggcataatctgcagatacaaaaaaccccgccggagcg       <  1:2888978‑M2/100‑65 (MQ=255)
                                                                                              tGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTc      <  1:502387/100‑1 (MQ=255)
                                                                                               gCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCctgcaaaaaatagcaataccgtaatcaggcataatctgcagatacaaaaaaccccgccggagcggg     <  1:986255‑M2/100‑67 (MQ=255)
                                                                                                cAGgccagataaggcgttcacgccgcatctggcctgcaaaaaatagcaataccgtaatcaggcataatctgcagatacaaaaaaccccgccggagcgggg    >  1:1679737‑M1/1‑3 (MQ=255)
                                                                                                cAGGCCAGATAAGGCGTTCACGCCGCATCTGGCctgcaaaaaatagcaataccgtaatcaggcataatctgcagatacaaaaaaccccgccggagcgggg    <  1:1468346‑M2/100‑68 (MQ=255)
                                                                                                cAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTcgg    >  2:2556528/1‑100 (MQ=255)
                                                                                                 aGGCCAGATAAGGCGTTCACGCCGCATCTGGCctgcaaaaaatagcaataccgtaatcaggcataatctgcagatacaaaaaaccccgccggagcgggg    <  2:2506230‑M2/99‑68 (MQ=255)
                                                                                                 aGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTcggc   <  2:1755540/100‑1 (MQ=255)
                                                                                                  ggCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTcggcg  >  2:529955/1‑100 (MQ=255)
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CGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCG  >  NC_000913/2282793‑2282989

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.