New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2282890NA (NA)6 (0.050) 6/164 NT NA noncoding (4/34 nt) REP159 (repetitive extragenic palindromic) element; contains 1 REP sequences REP159 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 = 2282920 NA (NA)noncoding (34/34 nt) REP159 (repetitive extragenic palindromic) element; contains 1 REP sequences REP159 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 144 total aligned reads displayed.

AAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGCCTTTAATGGTCAAGGTATCGGTTG  >  NC_000913/2282821‑2283019
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aaaCCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGC                                                                                                     >  1:674167‑M2/1‑100 (MQ=255)
aaaCCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGC                                                                                                     >  2:1174940‑M2/1‑100 (MQ=255)
aaaCCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGC                                                                                                     >  2:20902‑M2/1‑100 (MQ=255)
  aCCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCAt                                                                                                   >  2:3242070/1‑100 (MQ=255)
   ccccGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATGCGGCGTGAACGCCTTATCTGGCctg                                                                                                  >  1:1679737‑M2/1‑97 (MQ=255)
   ccccGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCAtt                                                                                                  >  2:2676917/1‑100 (MQ=255)
   ccccGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCAt                                                                                                   <  2:388636/99‑1 (MQ=255)
    cccGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTc                                                                                                 <  2:2842100/100‑1 (MQ=255)
     ccGCTCCGGCGGGGTTTTTTGTCTCTGCAGACTATGCGTGATTACGGCATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCa                                                                                                <  2:2188759/100‑1 (MQ=38)
      cGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAg                                                                                               <  2:127077/100‑1 (MQ=255)
       gCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGa                                                                                              <  1:990587/100‑1 (MQ=255)
         tCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAac                                                                                            <  2:2558588/100‑1 (MQ=255)
           cggcggGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAacac                                                                                          <  1:2267281/100‑1 (MQ=255)
            ggcggGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAAcaca                                                                                         >  1:1718687/1‑100 (MQ=255)
              cggGGTTTTTTGTATCTGCGGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACaaa                                                                                       >  1:2788279/1‑100 (MQ=255)
                  gTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCg                                                                                   >  2:3214882/1‑100 (MQ=255)
                  gTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCg                                                                                   <  1:2568858/100‑1 (MQ=255)
                    tttttGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGAt                                                                                 >  1:1555570/1‑100 (MQ=255)
                     ttttGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGAtt                                                                                <  1:1651097/100‑1 (MQ=255)
                     ttttGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGAtt                                                                                >  1:1356444/1‑100 (MQ=255)
                        tGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAAt                                                                             >  2:2797778/1‑100 (MQ=255)
                        tGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAAt                                                                             >  1:1792699/1‑100 (MQ=255)
                         gTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAAtt                                                                            <  1:1320747/100‑1 (MQ=255)
                           aTCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAAttac                                                                          >  1:410772/1‑98 (MQ=255)
                           aTCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTgc                                                                          <  1:1444533/100‑1 (MQ=255)
                           aTCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTgc                                                                          >  2:1635061/1‑100 (MQ=255)
                             cTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTTTTTTTTTTATAAGGCGATCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTgc                                                                          >  2:1167337/1‑98 (MQ=25)
                             cTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTgccg                                                                        <  2:1792687/100‑1 (MQ=255)
                              tGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTgccgc                                                                       >  1:3149630/1‑100 (MQ=255)
                               gCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTgccgcc                                                                      >  1:147820/1‑100 (MQ=255)
                                cAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCa                                                                     <  2:2888004/100‑1 (MQ=255)
                                 aGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAg                                                                    >  1:1066952/1‑100 (MQ=255)
                                 aGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAg                                                                    >  1:1131122/1‑100 (MQ=255)
                                 aGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAg                                                                    >  1:1132237/1‑100 (MQ=255)
                                  gATTATGCCTGATTACGGTATTGCTATTTTTTGTATGTTAGATAAGGAGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTgccgcc                                                                      >  2:1486871/1‑97 (MQ=38)
                                  gATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGa                                                                   <  1:1785628/100‑1 (MQ=255)
                                      aTGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTc                                                               >  2:2204451/1‑100 (MQ=255)
                                       tGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTcc                                                              >  2:720497/1‑100 (MQ=255)
                                         ccTGATTACGGTATTGCTATTTTTTGCTGGTCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTcc                                                              >  1:740331/1‑98 (MQ=255)
                                          cTGATTACGGAATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGgc                                                           <  2:2133579/100‑1 (MQ=255)
                                            gATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGgcgc                                                         >  2:81434/1‑100 (MQ=255)
                                              ttACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTg                                                       <  2:2454035/100‑1 (MQ=255)
                                               tACTGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGc                                                      <  1:996057/100‑1 (MQ=255)
                                               tACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGc                                                      <  1:3242098/100‑1 (MQ=255)
                                               tACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGc                                                      <  1:2807695/100‑1 (MQ=255)
                                                aCGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCa                                                     >  2:3123309/1‑100 (MQ=255)
                                                 cGGTATTGCTGTTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCaa                                                    >  1:2296316/1‑100 (MQ=255)
                                                 cGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCaa                                                    >  1:2475755/1‑100 (MQ=255)
                                                   gTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAAtt                                                  <  2:2153139/100‑1 (MQ=255)
                                                      ttGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGt                                               <  2:2386601/100‑1 (MQ=255)
                                                        gCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTcg                                             <  2:1157291/100‑1 (MQ=255)
                                                         cTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTcgc                                            >  1:2934200/1‑100 (MQ=255)
                                                         cTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTcg                                             >  1:947994/1‑99 (MQ=255)
                                                          tATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTcgcg                                           <  2:1187288/100‑1 (MQ=255)
                                                             nttttGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCaa                                        >  2:2320922/2‑100 (MQ=255)
                                                               tttGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAAt                                      <  1:1499226/100‑1 (MQ=255)
                                                                ttGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCctgcaaaaaatagcaataccgtaatcaggcataatctgcagatacaaaaaaccccgccggagcg                                     <  1:2888978‑M2/100‑65 (MQ=255)
                                                                ttGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAAtt                                     <  1:3138213/100‑1 (MQ=255)
                                                                 tGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTc                                    <  1:502387/100‑1 (MQ=255)
                                                                   cAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTcgg                                  >  2:2556528/1‑100 (MQ=255)
                                                                    aGGCCAGATAAGGCGTTCACGCCGCATCTGGCctgcaaaaaatagcaataccgtaatcaggcataatctgcagatacaaaaaaccccgccggagcgggg                                  <  2:2506230‑M2/99‑68 (MQ=255)
                                                                    aGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTcggc                                 <  2:1755540/100‑1 (MQ=255)
                                                                     ggCCAGATAAGGCGTTCACGCCGCATCTGGCctgcaaaaaatagcaataccgtaatcaggcataatctgcagatacaaaaaaccccgccggagcggggtt                                <  1:980132‑M2/100‑70 (MQ=255)
                                                                     ggCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTcggcg                                >  2:529955/1‑100 (MQ=255)
                                                                     ggCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTcggc                                 >  1:2544635/1‑99 (MQ=255)
                                                                      gCCAGATAAGGCGTTCACGCCGCATCTGGCctgcaaaaaatagcaataccgtaatcaggcataatctgcagatacaaaaaaccccgccggagcggggttt                               <  2:687786‑M2/100‑71 (MQ=255)
                                                                      gCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTcggcgg                               <  2:1555561/100‑1 (MQ=255)
                                                                      gCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTcggcgg                               <  2:1356436/100‑1 (MQ=255)
                                                                        cAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGgcggcg                             >  1:1029817/1‑100 (MQ=255)
                                                                         aGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGt                            >  1:2964074/1‑100 (MQ=255)
                                                                            tAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGcc                         >  2:2999792/1‑100 (MQ=255)
                                                                            tAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGcc                         >  1:1603130/1‑100 (MQ=255)
                                                                               ggCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGCCttt                      >  2:1944257/1‑100 (MQ=255)
                                                                               ggCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGCCttt                      >  2:1248067/1‑100 (MQ=255)
                                                                                gCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGCCTTTa                     <  2:1520329/100‑1 (MQ=255)
                                                                                  gTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGCCTTTAAt                   >  1:1274126/1‑100 (MQ=255)
                                                                                   ttCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGCCTTTAATg                  >  1:716258/1‑100 (MQ=255)
                                                                                    tCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGCCCCGCGCTGCAATTGGTCACGCAAATTCAGCGGCGTGCCATTaaag                  >  1:2228482/1‑97 (MQ=255)
                                                                                     cACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGCCTTTAATGGt                >  2:451377/1‑100 (MQ=255)
                                                                                       cgccgcATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGCCTTTAATGGTCa              >  1:805344/1‑100 (MQ=255)
                                                                                       cgccgcATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGCCTTTAATGGTCa              >  1:1947888/1‑100 (MQ=255)
                                                                                       cgccgcATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGCCTTTAATGGTCa              >  2:494095/1‑100 (MQ=255)
                                                                                         ccggATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGTCTGCGGTCCTTTAATGGTCaat            <  2:947314/100‑2 (MQ=255)
                                                                                         ccgcATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGCCTTTAATGGTCAAg            <  2:3051716/100‑1 (MQ=255)
                                                                                         ccgcATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGCCTTTAATGGTCAAg            >  2:1027857/1‑100 (MQ=255)
                                                                                          cgcATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGCCTTTAATGGTCAAgg           <  2:2427034/100‑1 (MQ=255)
                                                                                          cgcATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGCCTTTAATGGTCAAgg           <  2:2060870/100‑1 (MQ=255)
                                                                                          cgcATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGCCTTTAATGGTCAAgg           <  2:1066947/100‑1 (MQ=255)
                                                                                           gcATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGCCTTTAATGGTCAAGGt          <  1:1846200/100‑1 (MQ=255)
                                                                                              tCTGGCATTCAGAACACAAAGCCGATTAATTGCCGCCAGACTTCCGGCGCTGCAATTGGTCGCGCAAATTCGGTGGCGTGCCTTTAATGGTCAAgg           <  2:1929588/96‑1 (MQ=255)
                                                                                               caggcctgcaaaaaatagcaataccgtaatcaggcataatctgcagatacaaaaaaccccgccggagcggggttttttacaacttattcagcaattaagc      <  1:2190121‑M2/98‑96 (MQ=255)
                                                                                               cTGGCctgcaaaaaatagcaataccgtaatcaggcataatctgcagatacaaaaaaccccgccggagcggggttttttacaacttattcagcaattaagc      <  2:3190317‑M2/100‑96 (MQ=255)
                                                                                               cTGGCctgcaaaaaatagcaataccgtaatcaggcataatctgcagatacaaaaaaccccgccggaccggggttttttacaacttattcagcaattaagc      <  2:2537489‑M2/100‑96 (MQ=255)
                                                                                                tGGCctgcaaaaaatagcaataccgtaatcaggcataatctgcagatacaaaaaaccccgccggagcggggttttttacaacttattcagcaattaagcg     <  2:2675835‑M2/100‑97 (MQ=255)
                                                                                                tGGCctgcaaaaaatagcaataccgtaatcaggcataatctgcagatacaaaaaaccccgccggagcggggttttttacaacttattcagcaattaagcg     >  2:3172923‑M2/1‑4 (MQ=255)
                                                                                                tGGCctgcaaaaaatagcaataccgtaatcaggcataatctgcagatacaaaaaaccccgccggagcggggttttttacaacttattcagcaattaagcg     >  1:1169980‑M2/1‑4 (MQ=255)
                                                                                                 ggCctgcaaaaaatagcaataccgtaatcaggcataatctgcagatacaaaaaaccccgccggagcggggttttttacaacttattcagcaattaagcgc    <  2:1088149‑M2/100‑98 (MQ=255)
                                                                                                   cctgcaaaaaatagcaataccgtaatcaggcataatctgcagatacaaaaaaccccgccggagcggggctttttacaacttattcagcaattaagcgcg   <  1:600128‑M2/99‑99 (MQ=255)
                                                                                                   cATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGCCTTTAATGGTCAAGGTATCGGTTg  >  1:581138/1‑100 (MQ=255)
                                                                                                   cATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGCCTTTAATGGTCAAGGTATCGGTTg  >  1:1065211/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
AAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGCCTTTAATGGTCAAGGTATCGGTTG  >  NC_000913/2282821‑2283019

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.