New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2798052NA (NA)6 (0.050) 4/166 NT NA intergenic (+8/+39) ygaP/stpA DUF2892 family inner membrane rhodanese/DNA binding protein, nucleoid‑associated
?NC_000913 = 2798082 NA (NA)noncoding (30/30 nt) REP192 (repetitive extragenic palindromic) element; contains 1 REP sequences REP192 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 133 total aligned reads displayed.

TGGTGCCGGGTTACTGTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCGGT  >  NC_000913/2797957‑2798151
                                                                                               |                                                                                                   
tgGTGCCGGGTTACTGTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGGTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACgccg                                                                                                 >  2:2019138‑M1/1‑96 (MQ=255)
 ggTGCCGGGTTACTGTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACgccgg                                                                                                <  1:903690‑M1/100‑6 (MQ=255)
  gggccGGGTTACTGTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACgccgga                                                                                               >  1:2211892‑M1/3‑94 (MQ=255)
  gTGCCGGGTTACTGTTTGCAGGAATCAGCGGTTTTTGTGTTATGTTAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACgccgga                                                                                               >  2:1324211‑M1/1‑94 (MQ=255)
   tGCCGGGTTACTGTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACgccgg                                                                                                >  1:2130738‑M1/1‑93 (MQ=255)
    gCCGGGTTACTGTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGAcg                                                                                             <  1:3187531/100‑1 (MQ=255)
    gCCGGGTTACTGTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGAcg                                                                                             >  1:1819983/1‑100 (MQ=255)
       gggTTACTGTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACgcgc                                                                                          <  2:2565649/100‑1 (MQ=255)
        ggTTACTGTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGcc                                                                                         <  2:1993014/100‑1 (MQ=255)
        ggTTACTGTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGcc                                                                                         >  1:73158/1‑100 (MQ=255)
         gTTACTGTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGccc                                                                                        <  2:2683061/100‑1 (MQ=255)
          ttACTGTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCt                                                                                       <  1:1060683/100‑1 (MQ=255)
           tACTGTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTa                                                                                      >  1:663130/1‑100 (MQ=255)
            aCTGTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTag                                                                                     <  2:2247461/100‑1 (MQ=255)
               gTTTGCAGGAATCAGCGGTTTTTTTTTTTTTTTTAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCTCCCTaaca                                                                                   >  2:2200184/1‑99 (MQ=255)
               gTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTagcag                                                                                  >  1:3108907/1‑100 (MQ=255)
               gTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTagcag                                                                                  >  1:2951151/1‑100 (MQ=255)
               gTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTagcag                                                                                  >  2:2796400/1‑100 (MQ=255)
               gTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTagcag                                                                                  >  2:35544/1‑100 (MQ=255)
               gTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTagca                                                                                   >  1:2858223/1‑99 (MQ=255)
                 ttGCAGGAATCAGCTGTTTTTATGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCg                                                                                <  1:957111/100‑1 (MQ=255)
                 ttGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACTCCGGACGCGCCCTAGCAGCg                                                                                <  2:739401/100‑1 (MQ=255)
                   gCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGAc                                                                              <  1:1049191/100‑1 (MQ=255)
                    cAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACa                                                                             >  2:2207623/1‑100 (MQ=255)
                       gAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCC                                                                          <  1:44597‑M2/100‑1 (MQ=255)
                       gAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCC                                                                          >  1:231311‑M2/1‑100 (MQ=255)
                           cAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGcc                                                                      <  1:264493/100‑1 (MQ=255)
                           cAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGcc                                                                      <  2:2986733/100‑1 (MQ=255)
                           cAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGcc                                                                      >  2:1192348/1‑100 (MQ=255)
                            aGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACgccggatgtcgctgctagggcgcgtccggcgt                                                                     <  1:1570287‑M1/100‑33 (MQ=255)
                            aGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGcc                                                                      >  1:1174503/1‑99 (MQ=255)
                            aGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCt                                                                     <  2:2791389/100‑1 (MQ=255)
                            aGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCt                                                                     >  1:1248774/1‑100 (MQ=255)
                             gggggttttgtggaATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACgccggatgtcgctgctagggcgcgtccggcgtc                                                                    <  2:2720176‑M1/95‑34 (MQ=255)
                              cGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACagatcggaaga                                                                   >  1:36350/1‑90 (MQ=255)
                              cGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCa                                                                   >  2:2140254/1‑100 (MQ=255)
                              cGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCa                                                                   >  2:243963/1‑100 (MQ=255)
                               ggTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGTTCCAACGAGCTTGAGAAGCGACgccggatgtcgctgctagggcgcgtccggcgtcgc                                                                  <  1:248396‑M1/100‑36 (MQ=255)
                               ggTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAg                                                                  <  2:44597/100‑1 (MQ=255)
                               ggTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAg                                                                  <  1:672998/100‑1 (MQ=255)
                               ggTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAg                                                                  >  1:1761498/1‑100 (MQ=255)
                                gTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACgccggatgtcgctgctagggcgcgtccggcgtcgct                                                                 <  1:1504031‑M1/100‑37 (MQ=255)
                                gTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGt                                                                 >  2:776145/1‑100 (MQ=255)
                                    ttGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAAtt                                                             <  1:2207639/100‑1 (MQ=255)
                                    ttGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAAtt                                                             <  1:16150/100‑1 (MQ=255)
                                    ttGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAAtt                                                             >  1:1732283/1‑100 (MQ=255)
                                     tgtgGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTa                                                            >  1:3220627/1‑100 (MQ=255)
                                        ggAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGAt                                                         >  2:341629/1‑100 (MQ=255)
                                           aTGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAg                                                      <  1:1608978/100‑1 (MQ=255)
                                           aTGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGCACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAg                                                      >  2:142597/1‑100 (MQ=255)
                                             ggCAAGGTTGTTAGATAAGATGCCGTGGAACCAATGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAGTTACATCAGGa                                                    <  2:1706444/100‑1 (MQ=255)
                                             ggCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGa                                                    >  1:3247934/1‑100 (MQ=255)
                                             ggCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGa                                                    <  2:1857190/100‑1 (MQ=255)
                                             ggCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGa                                                    >  1:1219898/1‑100 (MQ=255)
                                              gCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGaa                                                   >  1:2701013/1‑100 (MQ=255)
                                              gCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGaa                                                   >  2:3185288/1‑100 (MQ=255)
                                              gCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGaa                                                   >  2:669412/1‑100 (MQ=255)
                                               cAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACgccggatgtcgctgctagggcgcgtccggcgtcgcttctcaagctcgttg                                                   <  1:2528024‑M1/99‑51 (MQ=255)
                                                aaGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAAt                                                 <  2:1819971/100‑1 (MQ=255)
                                                     ttttAAATAATATGCCGTTGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAAtcgtcg                                            <  1:1869558/98‑1 (MQ=255)
                                                     tgttAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAAtcgtcg                                            >  1:579605/1‑100 (MQ=255)
                                                     tgttAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAAtcgtcg                                            <  2:1223076/100‑1 (MQ=255)
                                                     tgttAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAAtcgtcg                                            <  2:547274/100‑1 (MQ=255)
                                                     tgttAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAAtcgtcg                                            >  2:2360854/1‑100 (MQ=255)
                                                          gATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCgagaga                                       >  2:664444/1‑100 (MQ=255)
                                                          gATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCgagaga                                       <  2:2379767/100‑1 (MQ=255)
                                                              aGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTa                                   >  2:3215367/1‑100 (MQ=255)
                                                                   ccGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTc                              <  1:1842494/100‑1 (MQ=255)
                                                                     gTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTg                            >  2:1427905/1‑100 (MQ=255)
                                                                     gTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTg                            >  1:1162719/1‑100 (MQ=255)
                                                                     gTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTg                            <  1:2777684/100‑1 (MQ=255)
                                                                         aaCCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAg                        <  2:903879/100‑1 (MQ=255)
                                                                         aaCCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAg                        <  2:1031493/100‑1 (MQ=255)
                                                                           ccAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAgcg                      <  2:117534/100‑1 (MQ=255)
                                                                            cAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCgtcgcttctcaagctcgttggttccacggcatcttatctaacaaccttg                      <  1:2528024‑M2/99‑50 (MQ=255)
                                                                            cAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAgcgc                     >  1:284415/1‑100 (MQ=255)
                                                                             aaCGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGcc                    <  2:1761486/100‑1 (MQ=255)
                                                                                gAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGa                 <  2:116592/100‑1 (MQ=255)
                                                                                 aGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAg                <  1:1242967/100‑1 (MQ=255)
                                                                                 aGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAg                <  1:661753/100‑1 (MQ=255)
                                                                                  gCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAg                <  2:804281/99‑1 (MQ=255)
                                                                                  gCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGc               >  1:1514849/1‑100 (MQ=255)
                                                                                  gCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGc               <  1:669180/100‑1 (MQ=255)
                                                                                  gCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGc               <  1:2380747/100‑1 (MQ=255)
                                                                                  gCTTGAAAAGCAACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGc               <  1:1401384/100‑1 (MQ=255)
                                                                                   cTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCa              <  1:2156357/100‑1 (MQ=255)
                                                                                    ttGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCaa             >  2:143132/1‑100 (MQ=255)
                                                                                     tGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAAt            >  1:1836822/1‑100 (MQ=255)
                                                                                     tGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAAt            >  1:1523797/1‑100 (MQ=255)
                                                                                       agaAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTg          <  2:1219892/100‑1 (MQ=255)
                                                                                       agaAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTg          <  2:2628236/100‑1 (MQ=255)
                                                                                       agaAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTg          >  1:1317961/1‑100 (MQ=255)
                                                                                        gaAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTgg         <  1:2140270/100‑1 (MQ=255)
                                                                                          aGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTgg         >  1:1769977/1‑98 (MQ=255)
                                                                                           gCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCgtcgcttctcaagctcgttggttccacggcatcttatctaacaaccttgccattccacaaaaac       <  1:248397‑M2/99‑65 (MQ=255)
                                                                                           gCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCgtcgcttctcaagctcgttggaaccacggcatcttatctaacaaccttgccattccacaaaaacc      <  1:248396‑M2/100‑66 (MQ=255)
                                                                                             gACGCCGGACGGGCCCAAGCAGCGACAGCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTc     <  1:2932990/99‑1 (MQ=255)
                                                                                              aCGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCgg   <  1:2603165/100‑1 (MQ=255)
                                                                                              aCGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCgg   <  2:2557581/100‑1 (MQ=255)
                                                                                               cGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCGgt  >  1:2943171/1‑100 (MQ=255)
                                                                                               |                                                                                                   
TGGTGCCGGGTTACTGTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCGGT  >  NC_000913/2797957‑2798151

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.