New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2835118NA (NA)8 (0.070) 6/164 NT NA noncoding (52/82 nt) REP195 (repetitive extragenic palindromic) element; contains 2 REP sequences REP195 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 = 2835148 NA (NA)noncoding (82/82 nt) REP195 (repetitive extragenic palindromic) element; contains 2 REP sequences REP195 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 186 total aligned reads displayed.

GGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGCGCCGCAGCAAT  >  NC_000913/2835019‑2835217
                                                                                                   |                                                                                                   
    tgttgAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGgccg                                                                                                 <  2:3195597‑M1/100‑5 (MQ=255)
     gttgAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGgccgg                                                                                                <  1:1331704‑M1/100‑6 (MQ=255)
     gttgAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCAACCTACGGGGACGCATGTGTAGgccgg                                                                                                >  1:1249310‑M1/1‑95 (MQ=255)
       tgAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGgccggat                                                                                              >  2:2365743‑M1/1‑93 (MQ=255)
       tgAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGgccggat                                                                                              >  2:449761‑M1/1‑93 (MQ=255)
        gAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATa                                                                                             >  2:372976/1‑100 (MQ=255)
        gAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATa                                                                                             <  1:3123125/100‑1 (MQ=255)
             cATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCg                                                                                        >  1:2523621/1‑100 (MQ=255)
              aTTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGt                                                                                       >  2:1835067/1‑100 (MQ=255)
               ttGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGtt                                                                                      <  2:2983196/100‑1 (MQ=255)
               ttGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGtt                                                                                      <  1:1662104/100‑1 (MQ=255)
                tGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGttt                                                                                     <  2:2849877/100‑1 (MQ=255)
                  ccGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTAc                                                                                   >  1:2298521/1‑100 (MQ=255)
                  ccGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTAc                                                                                   >  2:252380/1‑100 (MQ=255)
                   cGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTAcg                                                                                  <  2:1141954/100‑1 (MQ=255)
                   cGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTAcg                                                                                  <  1:1958735/100‑1 (MQ=255)
                    gATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTAcgc                                                                                 >  1:1375105/1‑100 (MQ=255)
                    gATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTAcgc                                                                                 >  1:1685264/1‑100 (MQ=255)
                     aTGTAGGTGGGCTACTGTGTCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTAcgcc                                                                                <  1:320026/100‑1 (MQ=255)
                     aTGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTAcgcc                                                                                <  2:139919/100‑1 (MQ=255)
                      tGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTAcgcag                                                                               >  2:973633/1‑98 (MQ=255)
                       gTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTAcgccgc                                                                              <  2:2605601/100‑1 (MQ=255)
                        tAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCA                                                                             <  1:1281749‑M2/100‑1 (MQ=255)
                        tAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGACGGATAAGGCGTTTACGCCGCA                                                                             <  1:818381‑M2/100‑1 (MQ=255)
                          ggTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATC                                                                           <  1:2625637‑M2/100‑1 (MQ=255)
                           gTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGgccggatgcggcgtaaacgccttatcc                                                                          <  1:379463‑M1/100‑28 (MQ=255)
                           gTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGgccggatgcggcgtaaacgccttatcc                                                                          <  1:2259961‑M1/100‑28 (MQ=255)
                            tGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCG                                                                         <  1:369355‑M2/100‑1 (MQ=255)
                             gggCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGgccggatgcggcgtaaacgccttatccgg                                                                        <  1:1397957‑M1/100‑30 (MQ=255)
                             gggCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGgccggatgcggcgtaaacgccttatccgg                                                                        <  1:645102‑M1/100‑30 (MQ=255)
                             gggCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGG                                                                        <  2:2677577‑M2/100‑1 (MQ=255)
                             gggCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGG                                                                        >  1:2416138‑M2/1‑100 (MQ=255)
                              ggCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGC                                                                       <  1:1165169‑M2/100‑1 (MQ=255)
                               gCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCa                                                                      <  1:2484386/100‑1 (MQ=255)
                               gCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGC                                                                       >  1:238912‑M2/1‑99 (MQ=255)
                               gCTACTGTGCCTAAAATGTCGGATGCGACGCTAGCGCGTGTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATGCGGCa                                                                      >  2:2176883/1‑100 (MQ=255)
                                  aCTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGATCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATg                                                                   <  1:2427587/100‑1 (MQ=255)
                                  aCTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATg                                                                   >  1:2711919/1‑100 (MQ=255)
                                  aCTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATg                                                                   <  1:2105429/100‑1 (MQ=255)
                                   cTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATgg                                                                  <  1:958394/100‑1 (MQ=255)
                                   cTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTCTACGCCGCATCCGGCAATgg                                                                  <  2:1982619/100‑1 (MQ=255)
                                     gtgCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGgtg                                                                <  1:1346132/100‑1 (MQ=255)
                                     gtgCCTAAAATGTCAGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGgtg                                                                <  2:2206424/100‑1 (MQ=255)
                                        ccTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTcc                                                             >  2:3255128/1‑100 (MQ=255)
                                        ccTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTcc                                                             <  2:3039471/100‑1 (MQ=255)
                                           aaaaTGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCaaa                                                          >  2:1513688/1‑100 (MQ=255)
                                            aaaTGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAAt                                                         <  2:2417686/100‑1 (MQ=255)
                                            aaaTGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAAt                                                         <  1:1864804/100‑1 (MQ=255)
                                             aaTGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATg                                                        <  1:2763442/100‑1 (MQ=255)
                                             aaTGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATg                                                        >  1:1833542/1‑100 (MQ=255)
                                               tGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCa                                                      <  1:1612676/100‑1 (MQ=255)
                                                GTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCaa                                                     <  2:1320216‑M1/100‑1 (MQ=255)
                                                 TCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAac                                                    >  1:2951154‑M1/1‑100 (MQ=255)
                                                  CGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAaca                                                   >  1:1790950‑M1/1‑100 (MQ=255)
                                                   ggataagacgcgccagcgtcgcatccgacCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAacac                                                  >  1:1329731‑M2/30‑100 (MQ=255)
                                                   ggataagacgcgccagcgtcgcatccgacCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAacac                                                  >  2:71152‑M2/30‑100 (MQ=255)
                                                   ggataagacgcgccagcgtcgcatccgacCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAaca                                                   >  2:2584987‑M2/30‑99 (MQ=255)
                                                    gataagacgcgccagcgtcgcatccgacCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACg                                                 >  2:1249958‑M2/29‑100 (MQ=255)
                                                    gataagacgcgccagcgtcgaatccgacCTACGGGGACGCATATCTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTTTCCAAATGCAACACg                                                 >  1:1034536‑M2/29‑100 (MQ=255)
                                                        cGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCCATGGTGTCCAAATGCAACACGtttt                                             >  2:420135/1‑100 (MQ=255)
                                                        cGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGtttt                                             >  1:1579244/1‑100 (MQ=255)
                                                         gACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTa                                            >  2:1043153/1‑100 (MQ=255)
                                                          aCGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTAt                                           <  2:748960/100‑1 (MQ=255)
                                                          aCGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTAt                                           <  1:592957/100‑1 (MQ=255)
                                                           cGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATc                                          <  1:2964204/100‑1 (MQ=255)
                                                           cGCTGGCGCGCCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGCCAATGGTGTCCAAATGCAACACGTTTTATc                                          <  2:2129157/100‑1 (MQ=255)
                                                            gCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATcc                                         <  2:1027814/100‑1 (MQ=255)
                                                             cgccagcgTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCg                                        >  2:3179517/6‑100 (MQ=255)
                                                                 cgcgTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCt                                    <  1:1298023/100‑1 (MQ=255)
                                                                  gcgTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTg                                   <  1:1513697/100‑1 (MQ=255)
                                                                   cgTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTgg                                  <  1:545696/100‑1 (MQ=255)
                                                                    gTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCAAAATGCAACACGTTTTATCCGTTCTGGa                                 >  1:985217/1‑100 (MQ=255)
                                                                     tCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGAc                                >  1:2609898/1‑100 (MQ=255)
                                                                      cTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACt                               <  1:3169820/100‑1 (MQ=255)
                                                                       ttATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACtt                              >  2:882601/1‑100 (MQ=255)
                                                                        tATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTc                             >  2:3124976/1‑100 (MQ=255)
                                                                          tccgacCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGCGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCAc                           <  1:1877062‑M2/94‑1 (MQ=255)
                                                                            cgacCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAAACCGTTTTCTCCGTTTTGGACTTc                             >  1:1402868‑M2/5‑96 (MQ=255)
                                                                                cTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTa                     >  1:1068299/1‑100 (MQ=255)
                                                                                cTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTa                     <  2:453475/100‑1 (MQ=255)
                                                                                 tACGGGGACGCATGTGTAGgccggataaggcgtttacgccgcatccggcctacacatgcgtccccgtaggtcggataagacgcgccagcgtcgcatccga                    >  2:98634‑M1/1‑19 (MQ=255)
                                                                                  aCGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAAc                   <  1:1043158/100‑1 (MQ=255)
                                                                                  aCGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAAc                   <  1:1849420/100‑1 (MQ=255)
                                                                                    ggggACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAAcc                  <  1:488487/99‑1 (MQ=255)
                                                                                     nggACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCaa                >  2:1530422/2‑100 (MQ=255)
                                                                                     gggACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCaa                >  2:3131649/1‑100 (MQ=255)
                                                                                       gACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAAcg              <  1:207895/100‑1 (MQ=255)
                                                                                         cGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAAcgcg            >  2:251244/1‑100 (MQ=255)
                                                                                           cATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACgcgc           >  2:793570/1‑99 (MQ=255)
                                                                                           cATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGcgcc          >  2:1928859/1‑100 (MQ=255)
                                                                                            aTGTGTAGGCCGGATAAGGCGTCTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGcgccg         >  2:2855765/1‑100 (MQ=255)
                                                                                             tgtgTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGcgccgc        >  1:2852747/1‑100 (MQ=255)
                                                                                               tgtAGGCCGGATAAGGCGTTTACGCCGCATCCGGCctacacatgcgtccccgtaggtcggataagacgcgccagcgtcgcatccgacattttaggcaca       <  2:1273581‑M2/99‑65 (MQ=255)
                                                                                                gtAGGCCGGATAAGGCGTTTACGCCGCATCCGGCctacacatgcgtccccgtaggtcggataagacgcgccagcgtcgcatccgacattttaggcacagt     <  1:2770553‑M2/100‑67 (MQ=255)
                                                                                                gtAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGCGCCgcagc     <  2:2154979/100‑1 (MQ=255)
                                                                                                 tAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGCGCCgcagca    <  1:1470598/100‑1 (MQ=255)
                                                                                                 tAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGCGCCgcagca    <  1:2885265/100‑1 (MQ=255)
                                                                                                   ggCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGCGCCGCAGCAAt  >  1:331287/1‑100 (MQ=255)
                                                                                                   ggCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTCTTATCCGCTCTGGACTTCACCCGCTAACCAACGCGCCGCAGCAAt  >  2:2806662/1‑100 (MQ=255)
                                                                                                   ggCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGGGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGCGCCGCAGCAAt  >  1:2296537/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
GGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGCGCCGCAGCAAT  >  NC_000913/2835019‑2835217

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.