BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3680367 =	NA (NA)	8 (0.070)	4/162	NT	NA	noncoding (1/76 nt)	REP265 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP265 (repetitive extragenic palindromic) element; contains 2 REP sequences
*	?	NC_000913	3680397 =	NA (NA)	8 (0.070)	4/162	NT	NA	noncoding (31/76 nt)	REP265 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP265 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 168 total aligned reads displayed.

TTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGTCATCCGTGGCGA  >  NC_000913/3680299‑3680496

  aTTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCAt                                                                                                  >  1:3158962/1‑100 (MQ=255)

   ttCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATc                                                                                                 >  1:654709/1‑100 (MQ=255)

   ttCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATc                                                                                                 <  2:1912263/100‑1 (MQ=255)

   attccacctgcacagtaatgcctgatggtgatgagttagcacaaccatcaggtatttatggatgaGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATc                                                                                                 >  2:2825549‑M1/66‑100 (MQ=255)

     gataaTCGCGCCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCa                                                                                               >  1:2965668/5‑100 (MQ=255)

     cAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCa                                                                                               <  2:1853530/100‑1 (MQ=255)

      aGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCa                                                                                               <  1:906689/99‑1 (MQ=255)

       gTATCGCGGCGCGATTATCCCGCGTGAGGCGATGTCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATa                                                                                             >  2:2860064/1‑100 (MQ=255)

        tATTGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATaa                                                                                            <  1:1760077/100‑1 (MQ=255)

          tCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAAt                                                                                          <  2:1430058/100‑1 (MQ=255)

           cgcgGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATa                                                                                         >  1:1274858/1‑100 (MQ=255)

              ggcgCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCt                                                                                      <  1:1095112/100‑1 (MQ=255)

                cgcgATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGa                                                                                    >  2:2063035/1‑100 (MQ=255)

                cgcgATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGa                                                                                    >  1:1629061/1‑100 (MQ=255)

                cgcgATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGa                                                                                    <  2:433941/100‑1 (MQ=255)

                  caaTTATCCCGCGTAAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGAt                                                                                   <  2:2701631/97‑1 (MQ=255)

                   gATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGGATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATgg                                                                                 >  2:1735946/1‑100 (MQ=255)

                   gATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATgg                                                                                 <  1:713905/100‑1 (MQ=255)

                   gATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATgg                                                                                 <  1:423590/100‑1 (MQ=255)

                   gATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATgg                                                                                 <  1:339540/100‑1 (MQ=255)

                     ttATACCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGt                                                                                <  2:936675/99‑1 (MQ=255)

                      tATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTtg                                                                              <  2:896968/100‑1 (MQ=255)

                      tATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTtg                                                                              <  2:3011359/100‑1 (MQ=255)

                      tATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTtg                                                                              <  2:2663026/100‑1 (MQ=255)

                          ccGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGc                                                                           <  2:1305545/99‑1 (MQ=255)

                           tgcgTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTa                                                                         <  2:2525051/99‑1 (MQ=255)

                            gcgTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTaa                                                                        >  1:2525069/1‑100 (MQ=255)

                             cgTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAAc                                                                       <  1:2117646/100‑1 (MQ=255)

                              gTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAAc                                                                       <  1:920868/99‑1 (MQ=255)

                               tGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACtc                                                                     >  2:1524222/1‑100 (MQ=255)

                                 aGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTtgtgagatcggaa                                                                   >  2:3148712/1‑91 (MQ=255)

                                 aGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACtcat                                                                   >  1:236124/1‑100 (MQ=255)

                                  ggCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATCCCTGATGGTTGTGCTAACtcatc                                                                  <  2:1157950/100‑1 (MQ=255)

                                  ggCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACtcatc                                                                  >  2:858851/1‑100 (MQ=255)

                                  ggCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACtcatc                                                                  >  1:2719713/1‑100 (MQ=255)

                                        gCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATc                                                            <  1:2974220/100‑1 (MQ=255)

                                        gCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATc                                                            <  1:958734/100‑1 (MQ=255)

                                            gCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGc                                                        <  2:3083455/100‑1 (MQ=255)

                                            gCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGc                                                        <  1:979724/100‑1 (MQ=255)

                                             cGTAAACGCAGCATACGCACAAGGCTGGATAAAGTGTTACCCCTCTATCCGGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCa                                                       <  1:2270533/100‑1 (MQ=255)

                                                aaaCGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCACTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCAtt                                                     >  2:2585834/1‑99 (MQ=255)

                                                 aaCGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTAc                                                   <  2:339860/100‑1 (MQ=255)

                                                 aaCGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTAc                                                   <  2:2868297/100‑1 (MQ=255)

                                                 aaCGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTAc                                                   <  2:2241146/100‑1 (MQ=255)

                                                  aCGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACt                                                  >  1:379230/1‑100 (MQ=255)

                                                  aCGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACt                                                  >  2:2268505/1‑100 (MQ=255)

                                                   cGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACtg                                                 <  2:2448382/100‑1 (MQ=255)

                                                   cGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACtg                                                 >  2:101122/1‑100 (MQ=255)

                                                    gcagcaTATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACtgt                                                <  2:2491062/100‑1 (MQ=255)

                                                    gcagcaTATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACtg                                                 <  1:2796165/99‑1 (MQ=255)

                                                       gcaTATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCa                                             >  1:1855940/1‑100 (MQ=255)

                                                        caTATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAg                                            <  1:1497855/100‑1 (MQ=255)

                                                        caTATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAg                                            >  1:204715/1‑100 (MQ=255)

                                                        caTATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGCGCTAACTCATCACCATCAGGCATTACTGTGCAg                                            >  1:1692785/1‑100 (MQ=255)

                                                          tatGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGt                                          >  1:1629786/1‑100 (MQ=255)

                                                          tatGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGt                                          <  1:1160021/100‑1 (MQ=255)

                                                          tatGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGt                                          >  1:2124420/1‑100 (MQ=255)

                                                           atGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTg                                         <  1:2019638/100‑1 (MQ=255)

                                                           atGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTg                                         >  2:2731866/1‑100 (MQ=255)

                                                           atGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTg                                         <  1:2073551/100‑1 (MQ=255)

                                                           atGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTg                                         <  2:866980/100‑1 (MQ=255)

                                                            tGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTgg                                        <  1:2343215/100‑1 (MQ=255)

                                                            tGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTgg                                        >  1:837288/1‑100 (MQ=255)

                                                            tGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTgg                                        <  2:2798961/100‑1 (MQ=255)

                                                             gCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGa                                       >  1:3097865/1‑100 (MQ=255)

                                                             gCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGa                                       >  2:3112842/1‑100 (MQ=255)

                                                             gCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGa                                       >  1:1295431/1‑100 (MQ=255)

                                                                aaaGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAata                                    <  2:1274850/100‑1 (MQ=255)

                                                                 aaGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAatat                                   <  2:1716780/100‑1 (MQ=255)

                                                                  aGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATc                                  <  2:2367778/100‑1 (MQ=255)

                                                                   agctggatagaggggtaacactttatccagcTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATcc                                 >  1:2528056‑M2/32‑100 (MQ=255)

                                                                   agctggatagaggggtaacactttatccagcTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATc                                  >  1:1446631‑M2/32‑99 (MQ=255)

                                                                    gctggatagaggggtaacactttatccagcTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCg                                >  1:531493‑M2/31‑100 (MQ=255)

                                                                    GCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCg                                <  1:2742641‑M1/100‑1 (MQ=255)

                                                                    GCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCAAAAATACCTGATGGTTGTGCTAACTCATCACCATCATGCATTACTGTGCAGGTGGAATATCCg                                >  2:216923‑M1/1‑100 (MQ=255)

                                                                     ctggatagaggggtaacactttatccagcTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAAtatctgt                               >  2:3226857‑M2/30‑97 (MQ=255)

                                                                     ctggatagaggggtaacactttatccagcTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGt                               >  1:137789‑M2/30‑100 (MQ=255)

                                                                     ctggatagaggggcaacactttatccagcTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGt                               >  2:2010453‑M2/30‑100 (MQ=255)

                                                                              gtgtTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAgg                      <  1:1735958/100‑1 (MQ=255)

                                                                               tgtTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGa                     <  1:2465083/100‑1 (MQ=255)

                                                                                gtTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGAt                    >  1:2946206/1‑100 (MQ=255)

                                                                                  tACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGt                  >  1:711495/1‑100 (MQ=255)

                                                                                   atcccTCTATCCAGCTTATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTa                 <  1:558853/98‑1 (MQ=255)

                                                                                   aCCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTa                 <  1:286410/100‑1 (MQ=255)

                                                                                    ccccTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTAc                >  2:505946/1‑100 (MQ=255)

                                                                                     cccTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACg               <  1:2835672/100‑1 (MQ=255)

                                                                                     cccTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACg               <  2:748480/100‑1 (MQ=255)

                                                                                     cccTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACg               <  1:2860089/100‑1 (MQ=255)

                                                                                     cccTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCACCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACg               >  2:319102/1‑100 (MQ=255)

                                                                                      ccTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGt              >  2:3217527/1‑100 (MQ=255)

                                                                                      ccTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGt              >  1:1510461/1‑100 (MQ=255)

                                                                                      ccTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGt              >  2:1654578/1‑100 (MQ=255)

                                                                                      ccTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGt              >  2:1462323/1‑100 (MQ=255)

                                                                                      ccTCTATCCAGCTCATACATAAATACCTGATGGTTGTGCTAACTCATGACTATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGt              >  2:1593708/1‑100 (MQ=255)

                                                                                         ctATCCAGCTCATACATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGTCAt           <  1:2552414/100‑1 (MQ=255)

                                                                                          tatccagcTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGTCATc          >  1:3156462‑M2/9‑100 (MQ=255)

                                                                                               agcTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGTCATCCGTgg     >  1:560530‑M2/4‑100 (MQ=255)

                                                                                                gcTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGTCATCCGTGGc    <  1:1210220‑M2/98‑1 (MQ=255)

                                                                                                gcTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGTCATCCGTGGc    <  1:870443‑M2/98‑1 (MQ=255)

                                                                                                gcTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGTCACCCGTGGc    <  2:1700901‑M2/98‑1 (MQ=255)

TTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGTCATCCGTGGCGA  >  NC_000913/3680299‑3680496

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.