New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4317917 =NA (NA)9 (0.080) 5/164 NT NA noncoding (1/83 nt) REP323 (repetitive extragenic palindromic) element; contains 2 REP sequences REP323 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 4317949 = NA (NA)noncoding (33/83 nt) REP323 (repetitive extragenic palindromic) element; contains 2 REP sequences REP323 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 176 total aligned reads displayed.

GCTGGTGCAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACGGA  >  NC_000913/4317850‑4318048
                                                                                                   |                                                                                                   
 cTGGTGCAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCt                                                                                                    >  1:1506493/1‑100 (MQ=255)
 cTGGTGCAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTAGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCt                                                                                                    >  2:533983/1‑100 (MQ=255)
  tGGTGCAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTa                                                                                                   >  1:1137654/1‑100 (MQ=255)
  tGGTGCAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTa                                                                                                   <  1:2660493/100‑1 (MQ=255)
   ggTGCAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTAc                                                                                                  >  2:212715/1‑100 (MQ=255)
   ggTGCAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTAc                                                                                                  >  2:2683054/1‑100 (MQ=255)
    gTGCAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACg                                                                                                 <  2:2610347/100‑1 (MQ=255)
      gCAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACggg                                                                                               <  2:2589385/100‑1 (MQ=255)
       tgagccggtgccggatgcggcgtaaacgccttatccggcctacaaatgcgctccccgtagGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACgggg                                                                                              >  2:2499702‑M1/61‑100 (MQ=255)
       cAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCATATCCGACCTACgggg                                                                                              <  1:2972692/100‑1 (MQ=255)
         ggATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAg                                                                                            <  1:2491606/100‑1 (MQ=255)
         ggATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAg                                                                                            <  1:1765491/100‑1 (MQ=255)
          gATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAgc                                                                                           <  2:2501064/100‑1 (MQ=255)
           aTGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAgcg                                                                                          <  2:3197274/100‑1 (MQ=255)
            tGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAgcgc                                                                                         >  2:289275/1‑100 (MQ=255)
            ccattgccggatgcggcgtaaacgccttatccggcctacacatgcgtccccgtagGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGggacg                                                                                           >  1:950246‑M1/56‑96 (MQ=255)
             gAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCa                                                                                        <  2:848276/100‑1 (MQ=255)
               aGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCAtt                                                                                      <  1:2886620/100‑1 (MQ=255)
                 gTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTg                                                                                    >  1:2233808/1‑100 (MQ=255)
                       cTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGcc                                                                              <  2:2362948/100‑1 (MQ=255)
                        tGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCg                                                                             <  1:1929455/100‑1 (MQ=255)
                         gACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCgg                                                                            >  1:116683/1‑100 (MQ=255)
                         gACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCgg                                                                            <  1:1547899/100‑1 (MQ=255)
                         gACGTTTTGTACGTTAATCATTTTTCGCCACGTGATTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCAATTGTAGGCCg                                                                             >  2:1783495/1‑99 (MQ=255)
                         gACGTTTAGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCATATCCGACCTACGGGGAGCGCATTTGTAGGCCgg                                                                            >  2:1706673/1‑100 (MQ=255)
                          aCGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGa                                                                           <  2:657326/100‑1 (MQ=255)
                          aCGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGa                                                                           >  1:3244985/1‑100 (MQ=255)
                            gTTTTGTACGTTAATCATTTTTCGCCTCGTGGATCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATa                                                                         >  1:3086146/1‑100 (MQ=255)
                                 gTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCg                                                                    <  2:2647544/100‑1 (MQ=255)
                                   aCGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGtt                                                                  <  1:1526742/100‑1 (MQ=255)
                                   aCGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGtt                                                                  <  2:2558880/100‑1 (MQ=255)
                                     gTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTa                                                                <  2:1142460/100‑1 (MQ=255)
                                     gTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTa                                                                >  2:2204339/1‑100 (MQ=255)
                                       tAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTAcg                                                              <  2:415554/100‑1 (MQ=255)
                                       tAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTAcg                                                              >  2:1285536/1‑100 (MQ=255)
                                        aaTCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTAcgc                                                             >  2:2204604/1‑100 (MQ=255)
                                          tCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTAcgccg                                                           >  2:1655464/1‑100 (MQ=255)
                                           naTTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTAcgccgc                                                          >  2:1681041/2‑100 (MQ=255)
                                           cATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTAcgccgc                                                          >  2:1960907/1‑100 (MQ=255)
                                              ttttCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCAtn                                                       <  1:59745/100‑2 (MQ=255)
                                                ttCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCg                                                     <  2:3065474/100‑1 (MQ=255)
                                                 tCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCgg                                                    <  1:1726789/100‑1 (MQ=255)
                                                  cGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGc                                                   <  2:1867569/100‑1 (MQ=255)
                                                  cGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGc                                                   <  2:1518204/100‑1 (MQ=255)
                                                   gCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCa                                                  >  1:1682900/1‑100 (MQ=255)
                                                   gCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCa                                                  <  2:448642/100‑1 (MQ=255)
                                                     cTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAcc                                                >  1:2314075/1‑100 (MQ=255)
                                                     cTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTAGCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAcc                                                <  1:659440/100‑1 (MQ=255)
                                                       cGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCgg                                              <  2:2420794/100‑1 (MQ=255)
                                                        gTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGc                                             <  1:2683077/100‑1 (MQ=255)
                                                        gTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGc                                             <  2:780122/100‑1 (MQ=255)
                                                        cgtccccgtaggtcggataagacgcgccagcgtcgcatccgacCTACGGGGA‑CGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCcggcaatgg                                              >  1:950246‑M2/44‑94 (MQ=255)
                                                           gTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCa                                          >  2:516314/1‑100 (MQ=255)
                                                            ttCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCaa                                         <  2:362629/100‑1 (MQ=255)
                                                             ccgtaggtcggataagacgcgtcagcgtcgcatccgacCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAAt                                        >  1:1735189‑M2/39‑100 (MQ=255)
                                                               gggTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTc                                      <  2:2879482/100‑1 (MQ=255)
                                                               gggTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTc                                      <  2:628037/100‑1 (MQ=255)
                                                                ggTGTCGGATGCTACGCTGACGCGTCTTACCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCt                                     <  1:816798/100‑1 (MQ=255)
                                                                ggTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCt                                     >  1:2110669/1‑100 (MQ=255)
                                                                ggTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCt                                     >  2:753240/1‑100 (MQ=255)
                                                                 gtgtCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTg                                    >  1:1587028/1‑100 (MQ=255)
                                                                 gtgtCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTg                                    <  1:1800315/100‑1 (MQ=255)
                                                                 gtgtCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTg                                    <  1:1398080/100‑1 (MQ=255)
                                                                 aggtcggataagacgcgtcagcgtcgcatccgacCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTg                                    <  1:2499720‑M2/66‑1 (MQ=255)
                                                                  tgtCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGc                                   <  2:38677/100‑1 (MQ=255)
                                                                  tgtCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGc                                   <  2:2493734/100‑1 (MQ=255)
                                                                  tgtCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGc                                   >  2:2663057/1‑100 (MQ=255)
                                                                  tgtCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGc                                   <  1:1842911/100‑1 (MQ=255)
                                                                   gtcggataagacgcgtcagcgtcgcatccgacCTACGGGGAGCGCATTTGTAGGCCGGCTAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCa                                  >  2:793463‑M2/33‑100 (MQ=255)
                                                                   gtcggataagacgcgtcagcgtcgcatccgacCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCa                                  >  1:1916464‑M2/33‑100 (MQ=255)
                                                                   ctcggctaagacgcgtcagcgtcgcatccgacCTACGGGGAGCGCATTTGTAGGCCGGATAACGCGTTTACGCCGCATCCGCCACCGCCTCAATTCTGc                                   >  2:3056796‑M2/33‑99 (MQ=255)
                                                                   GTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTg                                    >  2:1295019‑M1/1‑98 (MQ=255)
                                                                   GTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCa                                  >  2:2892712‑M1/1‑100 (MQ=255)
                                                                     CGGATGCGACGCCGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCaaa                                <  2:1572658‑M1/100‑1 (MQ=255)
                                                                       gataagacgcgtcagcgtcgcatccgacCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAAc                              >  2:3021062‑M2/29‑100 (MQ=255)
                                                                       GATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAAc                              >  2:857922‑M1/1‑100 (MQ=255)
                                                                        ATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGTCTCAATTCTGCAAAAcc                             >  2:17538‑M1/1‑100 (MQ=255)
                                                                         TGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCg                            <  1:2257026‑M1/100‑1 (MQ=255)
                                                                          gCGACGCTGACGCGTCTTCTCCGGCGTACGGGGAGCGCATTTGTCGGCCGGATAAGGCGTTTACGCCGCATCCTGCACCGTCTCAATTCTGCaaaa                               <  2:2710797/96‑1 (MQ=18)
                                                                          gCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGa                           >  1:2901288/1‑100 (MQ=255)
                                                                           cGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGAt                          <  1:3028483/100‑1 (MQ=255)
                                                                           cGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGAt                          <  1:431457/100‑1 (MQ=255)
                                                                            gACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATg                         <  2:2433884/100‑1 (MQ=255)
                                                                            gACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATg                         <  2:1243436/100‑1 (MQ=255)
                                                                            gACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATg                         <  1:3039337/100‑1 (MQ=255)
                                                                            gACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATg                         <  2:155515/100‑1 (MQ=255)
                                                                             aCGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGCTGa                        >  2:1367327/1‑100 (MQ=255)
                                                                              cGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGac                       <  2:2233792/100‑1 (MQ=255)
                                                                              cGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGac                       >  2:3077106/1‑100 (MQ=255)
                                                                              cGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGac                       <  1:532096/100‑1 (MQ=255)
                                                                              cGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGac                       <  1:713535/100‑1 (MQ=255)
                                                                                cTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGacac                     <  1:634828/100‑1 (MQ=255)
                                                                                    cgcgTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACcagc                 <  2:116681/100‑1 (MQ=255)
                                                                                    cgcgTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACcagc                 >  2:1487029/1‑100 (MQ=255)
                                                                                      cgTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACcagcag               >  1:1458394/1‑100 (MQ=255)
                                                                                           tATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCtgtg          <  1:1661462/100‑1 (MQ=255)
                                                                                           tATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCtgtg          <  1:404228/100‑1 (MQ=255)
                                                                                             tccgacCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGta        >  2:3053431‑M2/7‑100 (MQ=255)
                                                                                                  cCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCGCCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACgg   >  1:1045170‑M2/2‑100 (MQ=255)
                                                                                                   cTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACGga  >  2:2065320/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
GCTGGTGCAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACGGA  >  NC_000913/4317850‑4318048

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.