| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3632752 = | 71 (0.830) | 13 (0.180) | 6/154 | NT | 15.7% | intergenic (‑162/+100) | yhiJ/yhiL | DUF4049 family protein/pseudogene, DUF4049 family protein |
| ? | NC_000913 | 3632789 = | 78 (1.050) | intergenic (‑199/+63) | yhiJ/yhiL | DUF4049 family protein/pseudogene, DUF4049 family protein | |||||
CTACATTAAAACTCCATGAATACGGTGGTATGTCTTTTTAATCCTGCCAGTATTTCATAGGTTTTCTTAATCGATTGTAGAGGCATGTTCTGATGACGCCTCTACAATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3632860‑3632752‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctctacaatcGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAAACAACTAAGCCCTGAGGAATA > NC_000913/3632789‑3632887 CTACATTAAAACTCCATGAACACGGTGGTATGTCTTTTTAATCCTGCCAGTATTTCATAGGTTTTCTTAATCGATTGTAGAGGCATGTTCTGATGACGC > 2:1835876/1‑99 TACATTAAAACTCCATGAATACGGTGGTATGTCTTTTTAATCCTGCCAGTATTTCATAGGTTTTCTTAATCGATTGTAGAGGCATGTTCTGATGACGCCT > 2:657364/1‑100 CATTAAAACTCCATGAATACGGTGGTATGTCTTTTTAATCCTGCCAGTATTTCATAGGTTTTCTTAATCGATTGTAGAGGCATGTTCTGATGACGCCTCT > 1:1270842/1‑100 CATTAAAACTCCATGAATACGGTGGTATGTCTTTTTAATCCTGCCAGTATTTCATAGGTTTTCTTAATCGATTGTAGAGGCATGTTCTGATGACGCCTCT < 2:1583017/100‑1 ATTAAAACTCCATGAATACGGTGGTATGTCTTTTTAATCCTGCCAGTATTTCATAGGTTTTCTTAATCGATTGTAGAGGCATGTTCTGATGACGCCTCTA > 2:964736/1‑100 ATTAAAACTCCATGAATACGGTGGTATGTCTTTTTAATCCTGCCAGTATTTCATAGGTTTTCTTAATCGATTGTAGAGGCATGTTCTGATGACGCCTCTA > 1:2011979/1‑100 TTAAAACTCCATGAATACGGTGGTATGTCTTTTTAATCCTGCCAGTATTTCATAGGTTTTCTTAATCGATTGTAGAGGCATGTTCTGATGACGCCTCTAC < 2:660280/100‑1 TTAAAACTCCATGAATACGGTGGTATGTCTTTTTAATCCTGCCAGTATTTCATAGGTTTTCTTAATCGATTGTAGAGGCATGTTCTGATGACGCCTCTAC < 1:56946/100‑1 AACTCCATGAATACGGTGGTATGTCTTTTTAATCCTGCCAGTATTTCATAGGTTTTCTTAATCGATTGTAGAGGCATGTTCTGATGACGCCTCTACAATC < 1:1305830/100‑1 AACTCCATGAATACGGTGGTATGTCTTTTTAATCCTGCCAGTATTTCATAGGTTTTCTTAATCGATTGTAGAGGCATGTTCTGATGACGCCTCTACAATC < 2:1957105/100‑1 TTTCTTAATCGATTGTAGAGGCATGTTCTGATGACGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTAT > 1:1503292/1‑100 CGATTGTAGAGGCATGTTCTGATGACGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGT > 2:1038805/1‑100 CGATTGTAGAGGCATGTTCTGATGACGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGT > 1:2054462/1‑100 GATTGTAGAGGCATGTTCTGATGACGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTT > 1:2288924/1‑100 GATTGTAGAGGCATGTTCTGATGACGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTT > 2:912754/1‑100 GATTGTAGAGGCATGTTCTGATGACGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTT > 1:525823/1‑100 ATTGTAGAGGCATGTTCTGATGACGCCTGTACAATCGATTAAGAAAACCTATGAAATACTGACATGATTAAAAAGACATACCACCGGATTCATGGAGT > 2:230323/1‑98 ATTGTAGAGGCATGTTCTGATGACGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTT > 1:1445315/1‑100 ATTGTAGAGGCATGTTCTGATGACGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTT > 1:2008230/1‑100 GTAGAGGCATGTTCTGATGACGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAA > 2:1825530/1‑100 AGAGGCATGTTCTGATGACGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATG > 2:1193049/1‑100 AGAGGCATGTTCTGATGACGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATG > 1:2008701/1‑100 tGCATGTTCTGATGACGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACTACCGTATTCATGGAGTTTTAATGTAG > 2:991503/2‑100 GCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAAACAACTAAGC > 2:1285282/1‑100 GCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGAATAAAAAGACATACTACCGTATTAATGGAGCTTTAATATAGTTGAAAACAACTAAG > 2:1285315/1‑99 CTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAAACAACTAAGCCC < 2:1445307/100‑1 CTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAAACAACTAAGCCC < 2:941701/100‑1 CTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAAACAACTAAGCCCTG < 2:372892/100‑1 ACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAAACAACTAAGCCCTGAG > 1:99035/1‑100 ACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAAACAACTAAGCCCTGAG < 1:481210/100‑1 CAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAAACAACTAAGCCCTGAGG < 1:1671368/100‑1 CAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAAACAACTAAGCCCTGAGG < 2:2303456/100‑1 CAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAAACAACTAAGCCCTGAGG < 1:1581048/100‑1 CAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAAACAACTAAGCCCTGAGG > 1:1698349/1‑100 CAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAAACAACTAAGCCCTGAGG > 1:2319315/1‑100 CAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAAACAACTAAGCCCTGAGG < 2:150928/100‑1 CAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAAACAACTAAGCCCTGAGG > 1:128363/1‑100 CAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGGATTCATGGAGTTTTAATGTAGTTGAAAACAACTAAGCCCTGAGG > 2:2288327/1‑100 ATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGACTTTTAATGTAGTTGAAAACAACTAAGCCCTGAGGAA < 1:1682059/100‑1 CGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAAACAACTAAGCCCTGAGGAATA > 2:2121957/1‑100 CGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAAACAACTAAGCCCTGAGGAATA > 1:1229493/1‑100 CTACATTAAAACTCCATGAATACGGTGGTATGTCTTTTTAATCCTGCCAGTATTTCATAGGTTTTCTTAATCGATTGTAGAGGCATGTTCTGATGACGCCTCTACAATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3632860‑3632752‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctctacaatcGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAAACAACTAAGCCCTGAGGAATA > NC_000913/3632789‑3632887 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |