BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3632752 =	71 (0.830)	13 (0.180)	6/154	NT	15.7%	intergenic (‑162/+100)	yhiJ/yhiL	DUF4049 family protein/pseudogene, DUF4049 family protein
*	?	NC_000913	3632789 =	78 (1.050)	13 (0.180)	6/154	NT	15.7%	intergenic (‑199/+63)	yhiJ/yhiL	DUF4049 family protein/pseudogene, DUF4049 family protein

Only 100 of 135 total aligned reads displayed.

AATCATTCAGCCTCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAAACAACTAAGCCCTGAGGAATAA  >  NC_000913/3632690‑3632888

actccatgaatacggtggtatgtctttttaatcctgccagtatttcataggttttcttaatcGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCg                                                                                                     >  1:2054462‑M1/63‑100 (MQ=255)

  tCATTCAGCCTCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGAt                                                                                                   <  1:254237/100‑1 (MQ=255)

   cATTCAGCCTCAAATCATAATATTAAATTTCTTATCTCATAGCAGAGAAATTCCCTAAAGATTGTAGAGGCGTCATCATAACATGCCTCTACAATCGAtt                                                                                                  <  2:1667996/100‑1 (MQ=255)

    aTTCAGCCTCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTa                                                                                                 <  1:1439742/100‑1 (MQ=255)

    aTTCAGCCTCAAAGCATAATATGAAATTGCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTa                                                                                                 <  2:1406065/100‑1 (MQ=255)

       cAGCCTCAAAGCATAATATGAAATTTCTTAGCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACACTCGATTAAGa                                                                                              >  2:1566253/1‑100 (MQ=255)

         gCCTCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCCTCAGAACATGCCTCTACAATGGATTAAGa                                                                                              >  2:1972367/1‑98 (MQ=255)

         gCCTCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGaaa                                                                                            >  2:2083063/1‑100 (MQ=255)

         gCCTCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGaaa                                                                                            >  2:1581037/1‑100 (MQ=255)

         gCCTCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGaaa                                                                                            >  1:139411/1‑100 (MQ=255)

         atacggtggtatgtctttttaatcctgccagtatttcataggttttcttaatcGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGaaa                                                                                            >  1:1503292‑M1/54‑100 (MQ=255)

          ccTCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAAAATGCCTCTACAATCGATTAAGaaaa                                                                                           >  2:2103797/1‑100 (MQ=255)

           cTCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAAc                                                                                          >  1:895083/1‑100 (MQ=255)

            tCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAAcc                                                                                         <  1:1016745/100‑1 (MQ=255)

            tCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAAcc                                                                                         <  1:1110017/100‑1 (MQ=255)

             cAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCt                                                                                        >  1:150929/1‑100 (MQ=255)

                aGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATg                                                                                     <  1:13055/100‑1 (MQ=255)

                   ataataTGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGaaa                                                                                  >  2:176742/1‑100 (MQ=255)

                   ataataTGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGaaa                                                                                  <  1:1122609/100‑1 (MQ=255)

                   ataataTGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGaaa                                                                                  <  1:1021933/100‑1 (MQ=255)

                    taataTGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAAt                                                                                 >  2:755482/1‑100 (MQ=255)

                      atatGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATAc                                                                               >  1:1857593/1‑100 (MQ=255)

                        atGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTg                                                                             >  2:1538820/1‑100 (MQ=255)

                        atGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTg                                                                             >  1:975876/1‑100 (MQ=255)

                        atGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTg                                                                             >  1:2212952/1‑100 (MQ=255)

                         tGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTgg                                                                            <  2:1230492/100‑1 (MQ=255)

                         tGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTgg                                                                            <  1:631394/100‑1 (MQ=255)

                          gAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGc                                                                           >  1:1192116/1‑100 (MQ=255)

                           aaaTTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCa                                                                          <  1:296235/100‑1 (MQ=255)

                           aaaTTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCa                                                                          <  1:335929/100‑1 (MQ=255)

                            aaTTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAg                                                                         <  2:1916368/100‑1 (MQ=255)

                            aaTTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAg                                                                         <  1:1189248/100‑1 (MQ=255)

                            aaTTTCTTATCTCATAGCAGAGAAAGTACCTAAAGATTGTAGAGGAGTCATCAGAACATGCCTCTACACTCGATTAAGAAAACCTATGAAATACTGGCAg                                                                         >  1:694157/1‑100 (MQ=255)

                                 cTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTa                                                                    >  1:1855899/1‑100 (MQ=255)

                                 cTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTa                                                                    <  2:1351428/100‑1 (MQ=255)

                                     tctcATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTaaaaa                                                                <  1:1067538/100‑1 (MQ=255)

                                     tatcATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTaaaaa                                                                >  1:1607803/3‑100 (MQ=255)

                                      ctcATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAg                                                               >  2:912349/1‑100 (MQ=255)

                                       tcATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGa                                                              <  1:564311/100‑1 (MQ=255)

                                        cATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGAc                                                             <  1:1645236/100‑1 (MQ=255)

                                        cATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGAc                                                             <  2:2172064/100‑1 (MQ=255)

                                          tAGCAGAGAACGTCCATAAAGATTGTAGAGGCGTCATAAGAACATGCCTCTACAATCGATAAAGAAACACTATGAAATACTGGCAGGATTCAAAAGACa                                                            <  2:349525/99‑1 (MQ=255)

                                          tAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACAt                                                           >  2:947153/1‑100 (MQ=255)

                                           aGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATa                                                          >  2:276436/1‑100 (MQ=255)

                                           aGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATa                                                          <  1:2352096/100‑1 (MQ=255)

                                             cAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAAACATacc                                                        >  2:408949/1‑100 (MQ=255)

                                                 gaAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCg                                                    >  1:1933556/1‑100 (MQ=255)

                                                  aaaGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCg                                                    >  1:2105142/1‑99 (MQ=255)

                                                    tttcttaatcgattgtagaggcatgttctgatgacgcctctacaatcGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTAt                                                 >  1:1503292‑M2/48‑100 (MQ=255)

                                                     gTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTAtt                                                >  1:196363/1‑100 (MQ=255)

                                                     gTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTAtt                                                >  1:1214303/1‑100 (MQ=255)

                                                         cTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATg                                            <  1:587300/100‑1 (MQ=255)

                                                         cTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATg                                            <  1:1621775/100‑1 (MQ=255)

                                                           aaaGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGa                                          >  2:1707054/1‑100 (MQ=255)

                                                           aaaGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATAACACAGAATTAATGGa                                          >  2:1709471/1‑100 (MQ=255)

                                                             cgattgtagaggcatgttctgatgacgcctctacaatcGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGt                                        >  2:1038805‑M2/39‑100 (MQ=255)

                                                             cgattgtagaggcatgttctgatgacgcctctacaatcGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGt                                        >  1:2054462‑M2/39‑100 (MQ=255)

                                                             aGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGt                                        <  1:37904/100‑1 (MQ=255)

                                                              gattgtagaggcatgttctgatgacgcctctacaatcGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGtt                                       >  2:912754‑M2/38‑100 (MQ=255)

                                                              gattgtagaggcatgttctgatgacgcctctacaatcGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGtt                                       >  1:2288924‑M2/38‑100 (MQ=255)

                                                              gattgtagaggcatgttctgatgacgcctctacaatcGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGtt                                       >  1:525823‑M2/38‑100 (MQ=255)

                                                               attgtagaggcatgttctgatgacgcctgtacaatcGATTAAGAAAACCTATGAAATACTGACATGATTAAAAAGACATACCACCGGATTCATGGAGt                                        >  2:230323‑M2/37‑98 (MQ=255)

                                                               attgtagaggcatgttctgatgacgcctctacaatcGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGttt                                      >  1:2008230‑M2/37‑100 (MQ=255)

                                                                  gtagaggcatgttctgatgacgcctctacaatcGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTaa                                   >  2:1825530‑M2/34‑100 (MQ=255)

                                                                  GTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTaa                                   <  2:660280‑M1/100‑1 (MQ=255)

                                                                   TAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAAt                                  >  2:964736‑M1/1‑100 (MQ=255)

                                                                   TAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAAt                                  >  1:2011979‑M1/1‑100 (MQ=255)

                                                                    agaggcatgttctgatgacgcctctacaatcGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATg                                 >  2:1193049‑M2/32‑100 (MQ=255)

                                                                    AGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATg                                 >  1:1270842‑M1/1‑100 (MQ=255)

                                                                        GCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTGTTCATGGAGTTTTAATGTAg                              >  2:1835876‑M1/1‑99 (MQ=255)

                                                                          gTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTg                           <  1:1649152/100‑1 (MQ=255)

                                                                           tcatcaGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTg                           <  2:666223/99‑1 (MQ=255)

                                                                            catcaGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGaa                         <  2:503422/100‑1 (MQ=255)

                                                                             atcaGAACATACCTCTACCATAGATTAAGAAAACCTATTCAATACTGGCAGGACTAAAAACACATACCACCTTATTCATGGAGCTTTAATGTAGTTGaaa                        >  2:1386641/1‑100 (MQ=255)

                                                                              tcaGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGaaaa                       >  1:1339347/1‑100 (MQ=255)

                                                                              tcaGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGaaaa                       <  2:1764608/100‑1 (MQ=255)

                                                                              tcaGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGaaaa                       >  1:1000346/1‑100 (MQ=255)

                                                                              tcaGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGaaaa                       >  2:1054835/1‑100 (MQ=255)

                                                                               caGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAaac                      <  2:895081/100‑1 (MQ=255)

                                                                                aGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAaaca                     <  1:1819812/100‑1 (MQ=255)

                                                                                aGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAaaca                     <  1:2165393/100‑1 (MQ=255)

                                                                                aGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGGATTCATGGAGTTTTAATGTAGTTGAAaaca                     >  1:308810/1‑100 (MQ=255)

                                                                                  aaCATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGTATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAaacaac                   <  2:1040416/100‑1 (MQ=255)

                                                                                   aCATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAAACAACt                  <  2:1496252/100‑1 (MQ=255)

                                                                                    cATGCCTCTAAAATCGATTAAGAAAACCTATGGAATTCTGGAAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAAACAACTa                 <  2:196362/100‑1 (MQ=255)

                                                                                      tGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAAACAACTAAg               >  1:2176857/1‑100 (MQ=255)

                                                                                       gcctctacaatcGATTAAGAAAACCTATGAAATACTGGCAGGAATAAAAAGACATACTACCGTATTAATGGAGCTTTAATATAGTTGAAAACAACTAAg               >  2:1285315‑M2/13‑99 (MQ=255)

                                                                                         ctctacaatcGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAAACAACTAAGccc            <  2:1445307‑M2/90‑1 (MQ=255)

                                                                                           ctacaatcGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAAACAACTAAGCCCTg          <  2:372892‑M2/92‑1 (MQ=255)

                                                                                             acaatcGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAAACAACTAAGCCCTGAg        >  1:99035‑M2/7‑100 (MQ=255)

                                                                                             acaatcGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAAACAACTAAGCCCTGAg        <  1:481210‑M2/94‑1 (MQ=255)

                                                                                              caatcGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAAACAACTAAGCCCTGAgg       <  1:1581048‑M2/95‑1 (MQ=255)

                                                                                              caatcGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAAACAACTAAGCCCTGAgg       >  1:1698349‑M2/6‑100 (MQ=255)

                                                                                              caatcGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAAACAACTAAGCCCTGAgg       >  1:128363‑M2/6‑100 (MQ=255)

                                                                                              caatcGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAAACAACTAAGCCCTGAgg       <  1:1671368‑M2/95‑1 (MQ=255)

                                                                                              caatcGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGGATTCATGGAGTTTTAATGTAGTTGAAAACAACTAAGCCCTGAgg       >  2:2288327‑M2/6‑100 (MQ=255)

                                                                                              cAATCTATTAAGAAAACCTATCTATTACTAGCAGGATCAACAAGACGTTCCACCGTATCCATGGAGTTTTAATGTAGTTAAAAACAACTAAACCCTGaca       <  2:1802287/100‑3 (MQ=255)

                                                                                                atcGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGACTTTTAATGTAGTTGAAAACAACTAAGCCCTGAGGaa     <  1:1682059‑M2/97‑1 (MQ=255)

                                                                                                   gATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAAACAACTAAGCCCTGAGGAATaa  >  2:27271/1‑100 (MQ=255)

                                                                                                   gATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGCTGAAAACAACTAAGCCCTGAGGAATaa  >  2:2087581/1‑100 (MQ=255)

AATCATTCAGCCTCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAAACAACTAAGCCCTGAGGAATAA  >  NC_000913/3632690‑3632888

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.