| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3943632 = | NA (NA) | 17 (0.220) | 10/164 | NT | 100% | intergenic (+122/‑72) | gltU/rrlC | tRNA‑Glu/23S ribosomal RNA of rrnC operon |
| ? | NC_000913 | 3943636 = | 0 (0.000) | intergenic (+126/‑68) | gltU/rrlC | tRNA‑Glu/23S ribosomal RNA of rrnC operon | |||||
CCACCGTGTACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCTTTCGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCAC‑GAACAACTTTCgttgttc‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3943730‑3943632‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCA > NC_000913/3943636‑3943741 CCACCGTGTACGCTTAGTCGCTTAACCTCACAACCCTAAGATGTCTCTTTCGATTCATCATCGTGTTGCGAAAATTTGATAGACTCAC‑GAACAACTTTCG < 2:1392968/100‑1CCACCGTGTACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCTTTCGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCAC‑GAACAACTTTCG < 1:877597/100‑1CCACCGTGTACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCTTTCGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCAC‑GAACAACTTTCG > 1:958167/1‑100CCACCGTGTACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCTTTCGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCAC‑GAACAACTTTCG > 1:1625557/1‑100 CACCGTGTACGCTTAGTGGCTTAACCGCACAACCCGAAGATGTTTCTTTCGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCAC‑GAACAACTTTCGT < 2:1057021/100‑1 ACCGTGTACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCTTTCGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCAC‑GAACAACTTTCGTT < 1:1388572/100‑1 CCGTGTACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCTTTCGATTCATCATTGTGTTGCGAAAATTTGAGAGACTCAC‑GAACAACTTTCGTTG < 2:1300905/100‑1 CGTGTACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCTTTCGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCAC‑GAACAACTTTCGTTGT < 2:608083/100‑1 CGTGTACGCTTAGTCGCTTAACCTCACAACACGAAGATATTTCTTTCGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCAC‑GAACAACTTTCG > 2:1940538/1‑96 GTGTACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCTTTCGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCAC‑GAACAACTTTCGTTGTc > 1:1728131/1‑99 GTGTACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCTTTCGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCAC‑GAACAACTTTCGTTGTT < 1:301043/100‑1 GTGTACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCTTTCGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCAC‑GAACAACTTTCGTTGTT > 2:1202754/1‑100 TGTACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCTTTCGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCAC‑GAACAACTTTCGTTGTTC < 2:411858/100‑1 TGTACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCTTTCGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCAC‑GAACAACTTTCGTTGTTC < 1:1995526/100‑1 TGTACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCTTTCGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCAC‑GAACAACTTTCGTTGTTC < 1:584019/100‑1 TGTACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCTTTCGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCAC‑GAACAACTTTCGTTGTTC < 1:976307/100‑1 TGTACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCTTTCGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCAC‑GAACAACTTTCGTTGTTC < 1:1599398/100‑1 TGTACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCTTTCGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCAC‑GAACAACTTTCGTTGTTC < 2:324268/100‑1 TGTACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCTTTCGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCAC‑GAACAACTTTCGTTGTTC > 1:1319096/1‑100 GTACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCTTTCGATTCATCATCGTGTTGCCCAAATTTGAGAGACTCAC‑GAACAACTTTCGTT > 2:2213000/1‑95 ACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCTTACGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCAC‑GAACAACGAAAGTTGTTCGTG < 2:52428/100‑1 CGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCTTACGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCAC‑GAACAACGAAAGTTGTTCGTGA < 1:245258/100‑1 GCTTAGTCGCTTGACCTCACAACCCGAAGATGTTTCTTACGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCAC‑GAACAACGAAAGTTGTTCGTGAG < 1:125723/100‑1 GCTTAGTCGCTTAACCTCGCAACCCGAAGATGTTTCTTTCGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCAC‑GAACAACGAGAGTTGTTCGTGAG < 2:1484672/100‑1 GCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCTTACGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCAC‑GAACAACGAAAGTTGTTCGTGAG < 2:959511/100‑1 CTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCTTTCGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCACTGAACAACGAGAGTTGTTCGTGAG < 1:1806794/100‑1 TTAGTCGCTTAACCTCACAACCCGAAGATGTTTCTTTCGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCAC‑GAACAACGAAAGTTGTTCGTGAGTC < 1:1842543/100‑1 GTCGCTTAACCTCACAACCCGAAGATGTTTCTTTCGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCACTGAACAACGAGAGTTGTTCGTGAGTCTC < 1:1821140/100‑1 GTCGCTTAACCTCACAACCCGAAGATGTTTCTTACGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCAC‑GAACAACGAAAGTTGTTCGTGAGTCTCT > 1:321625/1‑100 CCTCACAACCCGAAGATGTTTCTTTCGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCAC‑GAACAACGAGAGTTGTTCGTGAGTCTCTCAAATTTTC < 1:1496750/100‑1 CTCACAACCCGAAGATGTTTCTTACGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCAC‑GAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCG < 2:321623/100‑1 CACAACCCGAAGATGTTTCTTTCGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCAC‑GAACAACGAGAGTTGTTCGTGAGTCTCTCAAATTTTCGCA < 1:1126517/100‑1 TCAC‑GAACAACTTTCGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCG > 1:781090/1‑100 CAC‑GAACAACTTTCGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGT > 1:2083393/1‑100 CAC‑GAACAACTTTCGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGT > 1:1530247/1‑100 CAC‑GAACAACTTTCGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGT > 1:1221851/1‑100 CAC‑GAACAACTTTCGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCG > 2:1483998/1‑99 CAC‑GAACAACTCTCGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTGTGAGGATAAGCGACTAAGCGT > 1:2347339/1‑100 AC‑GAACAACTTTCGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTA > 1:201586/1‑100 AC‑GAACAACTCTCGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTA > 2:697846/1‑100 C‑GAACAACTTTCGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTAC > 1:1722443/1‑100 C‑GAACAACTCTCGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTAC > 1:2307874/1‑100 ACTCTCGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTG > 1:1077797/1‑100 GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCC < 1:104583/100‑1 GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCC > 1:1802652/1‑100 TTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCC > 1:2156282/1‑100 TTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCC < 2:1340530/100‑1 TGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCT < 1:163000/100‑1 GTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTG < 1:1265983/100‑1 GTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTG < 1:1832175/100‑1 TTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGG < 1:1513575/100‑1 TCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGC > 2:1965355/1‑100 TCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGC < 1:1324251/100‑1 TCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGC < 1:391941/100‑1 CGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCA < 1:1442650/100‑1 CGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCA > 2:224423/1‑100 CGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCA > 2:1432425/1‑100 CGTGAGTCTCGCAAATTTTCGCAACACGATGGTGAATCGAAAGAAAGATCTTCGGGGTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCA > 2:1478216/1‑100 CGTGAGCCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGGATGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCA > 2:1524010/1‑100 CCACCGTGTACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCTTTCGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCAC‑GAACAACTTTCgttgttc‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3943730‑3943632‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCA > NC_000913/3943636‑3943741 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |