| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4168165 = | 52 (0.610) | 12 (0.150) | 5/168 | NT | 17.5% | noncoding (1507/1542 nt) | rrsB | 16S ribosomal RNA of rrnB operon |
| ? | NC_000913 | 4168187 = | 64 (0.790) | noncoding (1529/1542 nt) | rrsB | 16S ribosomal RNA of rrnB operon | |||||
AAACGCCTTGCTTTTCACTTTCTATCAGACAATCTGTGTGAGCACTACAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACGGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4168267‑4168165‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggttGGATCACCTCCTTACCTTAAAGAAGCGTACTTTGTAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGC > NC_000913/4168187‑4168285 AAACGCCTTGCTTTTCACTTTCTATCAGACAATCTGTGTGAGCACTACAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACG < 2:455041/100‑1AAACGCCTTGCTTTTCACTTTCTATCAGACAATCTGTGTGAGCACTACAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACG < 1:1706139/100‑1AAACGCCTTGCTTTTCACTTTCTATCAGACAATCTGTGTGAGCACTACAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACG < 1:2326765/100‑1 AACGCCTTGCTTTTCACTTTCTATCAGACAATCTGTGTGAGCACTACAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACGG < 1:1883478/100‑1 AACGCCTTGCTTTTCACTTTCTATCAGACAATCTGTGTGAGCACTACAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACGG > 1:547575/1‑100 AACGCCTTGCTTTTCACTTTCTATCAGACAATCTGTGTGAGCACTACAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACGG < 1:248284/100‑1 AACGCCTTGCTTTTCACTTTCTATCAGACAATCTGTGTGAGCACTACAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACGG < 1:314269/100‑1 ACGCCTTGCTTTTCACTTTCTATCAGACAATCTGTGTGAGCACTACAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACGGT < 1:688399/100‑1 CGCCTTGCTTTTCACTTTCTATCAGACAATCTGTGTGAGCACTACAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACGGTT < 1:388638/100‑1 GTGAGCACTTCAAAGAACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTG > 1:368774/1‑100 AGGAGGTGATCCAACCGCAGGTTCCCCTACGGTTGGATCACCTCCTTACCTTAAAGAAGCGTACTTTGTAGTGCTCACACAGATTGTCTGATAGAAAGTG > 1:1982763/1‑100 GGAGGTGATCCAACCGCAGGTTCCCCTACGGTTGGATCACCTCCTTACCTTAAAGCCGCGTACTTTGCAGTGCTCACACAGATTGTCTGAT‑GAAAATGAg > 2:453182/1‑99 TGATCCAACCGCAGGTTTCCCTACGGTTGGATCACCTACTTACCTTAAAGAAGCGTTCTTTGAAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAA > 2:1047400/1‑98 TGATCCAACCGCAGGTTCCCCTACGGTTGGATCACCTCCTTACCTTAAAGAAGCGTACTTTGTAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGC > 1:2279999/1‑100 GATCCAACCGCAGGTTCCCCTACGGTTGGATCACCTCCTTACCTTAAAGAAGCGTCCTTTGCAGTGCTCACACAGATTGTCTGAT‑GAAAATGAgcagt > 2:651261/1‑93 GATCCAACCGCAGGTTCCCCTACGGTTGGATCACCTCCTTACCTTAAAGAAGCGTACTTTGTAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCA > 1:138234/1‑100 GATCCAACCGCAGGTTCCCCTACGGTTGGATCACCTCCTTACCTTAAAGAAGCGTACTTTGCAGTGCTCACACAGATTGTCTGAT‑GAAAATGAgcagtaa > 2:68080/1‑93 ATCCAACCGCAGGTTCCCCTACGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAA > 1:36325/1‑100 TCCAACCGCAGGTTCCCCTACGGTTGGATCACCTCCTTACCTTAAAGAAGCGTACTTTGTAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAG > 1:125694/1‑100 TCCAACCGCAGGTTCCCCTACGGTTGGATCACCTCCTTACCTTAAAGAAGCGTACTTTGCAGTGCTCACACAGATTGTCTGAT‑GAAAATGAgcagtaaaa > 1:1504898/1‑91 CAACCGCAGGTTCCCCTACGGTTGGATCACCTCCTTACCTTAAAGAAGCGTACTTTGTAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGC > 1:2097463/1‑100 CGGTTGGATCACCTCCTTACCTTAAAGAAGCGTACTTTGTAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTG < 1:870246/100‑1 GTTGGATCACCTCCTTACCTTAAAGAAGCGTACTTTGTAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGcg < 2:1035876/100‑3 GTTGGATCACCTCCTTACCTTAAAGAAGCGTACTTTGTAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAG < 1:1814849/100‑1 TTGGATCACCTCCTTACCTTAAAGAAGCGTACTTTGTAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGt < 1:1644057/100‑2 TGGATTTCCTCCTTACCTTAAAGAAGCGTACTTTGTAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGC < 1:2278780/100‑1 TGGATCACCTCCTTACCTTAAAGAAGCGTACTTTGTAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGC < 1:1625261/100‑1 AAACGCCTTGCTTTTCACTTTCTATCAGACAATCTGTGTGAGCACTACAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACGGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4168267‑4168165‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggttGGATCACCTCCTTACCTTAAAGAAGCGTACTTTGTAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGC > NC_000913/4168187‑4168285 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |