| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 774622 | 70 (0.820) | 16 (0.200) | 11/166 | NT | 19.5% | intergenic (+20/‑130) | ybgE/ybgC | putative inner membrane protein in cydABX‑ybgE operon/acyl‑CoA thioester hydrolase |
| ? | NC_000913 | = 774648 | 67 (0.840) | intergenic (+46/‑104) | ybgE/ybgC | putative inner membrane protein in cydABX‑ybgE operon/acyl‑CoA thioester hydrolase | |||||
GCAGAAGGTTCTTTGGCAAGGGATTTTTTGCCCATTGCTTGCCGATATTGTTCTCATTGTCGGGCTGATTTTCTTCTTCTTTTAAATCAGAATTCTCTTTAAAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/774518‑774622‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taaaaaTTTATGGGCCTGGAGCGGCCCATAATTTTTTAAAGAGAATTCTGATTTAAAAGAAGAAGAAAATCAGCCCGACAATGAGAACAATATCGGCAAGCAA < NC_000913/774648‑774552 GCAGAAGGTTCTTTGGCAAGGGATTTTTTGCCTATTGCTTGCCGATATTGTTCTCATTGTCGGGCTGATTTTCTTCTTCTTTTAAATCAGAATTCTCTTT < 2:507348/100‑1GCAGAAGGTTCTTTGGCAAGGGATTTTTTGCCCATTGCTTGCCGATATTGTTCTCATTGTCGGGCTGATTTTCTTCTTCTTTTAAATCAGAATTCTCTTT > 2:204451/1‑100GCAGAAGGTTCTTTGGCAAGGGATTTTTTGCCCATTGCTTGCCGATATTGTTCTCATTGTCGGGCTGATTTTCTTCTTCTTTTAAATCAGAATTCTCTTT > 2:749124/1‑100GCAGAAGGTTCTTTGGCAAGGGATTTTTTGCCCATTGCTTGCCGATATTGTTCTCATTGTCGGGCTGATTTTCTTCTTCTTTTAAATCAGAATTCTCTTT < 2:1199407/100‑1 CAGAAGGTTCTTTGGCAAGGGATTTTTTGCCCATTGCTTGCCGATATTGTTCTCATTGTCGGGCTGATTTTCTTCTTCTTTTAAATCAGAATTCTCTTTA < 1:377551/100‑1 GAAGGTTCTTTGGCAAGTGATTTTTGGTCCATTTCTTGCCGATATTGTTCTCATTGTCGGGCTGATTTTCTTCTTCTTTTAAATCAGAATTCTCTTTAAA < 2:173645/100‑1 GAAGGTTCTTTGGCAAGGGATTTTTTGCCCATTGCTTGCCGATATTGTTCTCATTGTCGGGCTGATTTTCTTCTTCTTTTAAATCAGAATTCTCTTTAAA > 1:1553911/1‑100 AGGTTCTTTGGCAAGGGATTTTTTGCCCATTGCTTGCCGATATTGTTCTCATTGTCGGGCTGATTTTCTTCTTCTTTTAAATCAGAATTCTCTTTAAAAA < 2:1553954/100‑1 GTTCTTTGGCAAGGTTTTTTTTGACCATTGCTTGCCGATATTGTTCTCATTGTCGGTCTGATTTTATTCTTCTTTTAAATCAGAATTCTCTTTAAAAA < 2:2156942/98‑1 GGGATTTTTTGCCCATTGCTTGCCGATATTATTGTCATTGTCGGGCTGATTTTCTTCTTCTTTTAAATCAGAATTCTCTTTAAAAATTTGTGGGCCTGGA > 2:1566576/1‑100 TTTTGCCCATTGCTTGCCGATATTGTTCTCATTGTCGGGCTGATTTTCTTCTTCTTTTAAATCAGAATTCTCTTTAAAAAATTATGGGCCTGGAGCGGCC < 2:263364/100‑1 TGCCCATTGCTTGCCGATATTGTTCTCATTGTCGGGCTGATTTTCTTCTTCTTTTAAATCAGAATTCTCTTTAAAAATTTATGGGCCTGGAGCGGCCCAT < 1:1236004/100‑1 TGCCCATTGCTTGCCGATATTGTTCTCATTGTCGGGCTGATTTTCTTCTTCTTTTAAATCAGAATTCTCTTTAAAAATTTATGGGCCTGGAGCGGCCCAT < 1:2087552/100‑1 TGCCCATTGCTTGCCGATATTGTTCTCATTGTCGGGCTGATTTTCTTCTTCTTTTAAATCAGAATTCTCTTTAAAAATTTATGGGCCTGGAGCGGCCCAT < 1:51636/100‑1 ATTGCTTGCCGATATTGTTCTCATTGTCGGGCTGATTTTCTTCTTCTTTTAAATCAGAATTCTCTTTAAAAATTTATGGGCCTGGAGCGGCCCATAATTT < 1:1047017/100‑1 TGCTTGCCGATATTGTTCTCATTGTCGGGCTGATTTTCTTCTTCTTTTAAATCAGAATTCTCTTTAAAAATTTATGGGCCTGGAGCGGCCCATAATTTTT < 1:2055295/100‑1 TGCTTGCCGATATTGTTCTCATTGTCGGGCTGATTTTCTTCTTCTTTTAAATCAGAATTCTCTTTAAAAATTTATGGGCCTGGAGCGGCCCATAATTTTT < 2:1819505/100‑1 CTTGCCGATATTGTTCTCATTGTCGGGCTGATTTTCTTCTTCTTTTAAATCAGAATTCTCTTTAAAAAATTATGGGCCTGGAGCGGCCCATAATTTTTTA < 1:1099143/100‑1 GCCGATATTGTTCTCATTGTCGGGCTGATTTTCTTCTTCTTTTAAATCAGAATTCTCTTTAAAAATTTATGGGCCTGGAGCGGCCCATAATTTTTTAAAG < 1:757442/100‑1 GCCGATATTGTTCTCATTGTCGGGCTGATTTTCTTCTTCTTTTAAATCAGAATTCTCTTTAAAAATTTATGGGCCTGGAGCGGCCCATAATTTTTTAAAG < 1:1566587/100‑1 CCGATATTGTTCTCATTGTCGGGCTGATTTTCTTCTTCTTTTAAATCAGAATTCTCTTTATAAATTTATGGGCCTGGAGCGGCCCTTAATTTTTTAAAG < 2:1473301/99‑1 CCGATATTGTTCTCATTGTCGGGCTGATTTTCTTCTTCTTTTAAATCAGAATTCTCTTTAAAAATTTATGGGCCTGGAGCGGCCCATAATTTTTTAAAGA < 1:2005548/100‑1 CGATATTGTTCTCATTGTCGGGCTGATTTTCTTCTTCTTTTAAATCAGAATTCTCTTTAAAAATTTATGGGCCTGGAGCGGCCCATAATTTTTTAAAGAG < 1:759199/100‑1 GATATTGTTCTCATTGTCGGGCTGATTTTCTTCTTCTTTTAAATCAGAATTCTCTTTAAAAATTTATGGGCCTGGAGCGGCCCATAATTTTTTAAAGAGA < 2:635969/100‑1 AATCAGAATTCTCTTTAAAAAATTATGGGCCTGGAGCGGCCCATAATTTTTTAAAGAGAATTCTGATTTAAAAGAAGAAGAAAATCAGCCCGACAATGAG > 1:107349/1‑100 TAAAAATTTATGGGCCTGGAGCGGCCCATAATTTTTTAAAGAGAATTCTGATTTAAAAGAAGAAGAAAATCAGCCCGACAATGAGAACAATATCGGCAAG < 1:808661/100‑1 TAAAAATTTATGGGCCTGGAGCGGCCCATAATTTTTTAAAGAGAATTCTGATTTAAAAGAAGAAGAAAATCAGCCCGACAATGAGAACAATATCGGCAAG > 1:599706/1‑100 AAAAATTTATGGGCCTGGAGCGGCCCATAATTTTTTAAAGAGAATTCTGATTTAAAAGAAGAAGAAAATCAGCCCGACAATGAGAACAATATCGGCAAGC < 1:252706/100‑1 AAAAATTTATGGGCCTGGAGCGGCCCATAATTTTTTAAAGAGAATTCTGATTTAAAAGAAGAAGAAAATCAGCCCGACAATGAGAACAATATCGGCAAGC < 2:953092/100‑1 AAAATTTATGGGCCTGGAGCGGCCCATAATTTTTTAAAGAGAATTCTGATTTAAAAGAAGAAGAAAATCAGCCCGACAATGAGAACAATATCGGCAAGCA > 2:2110066/1‑100 AAATTTATGGGCCTGGAGCGGCCCATAATTTTTTAAAGAGAATTCTGATTTAAAAGAAGAAGAAAATCAGCCCGACAATGAGAACAATATCGGCAAGCAA > 2:1244141/1‑100 AATTTATGGGCCTGGAGCGGCCCATAATTTTTTAAAGAGAATTCTGATTTAAAAGAAGAAGAAAATCAGCCCGACAATGAGAACAATATCGGCAAGCAA > 2:1932105/1‑99 GCAGAAGGTTCTTTGGCAAGGGATTTTTTGCCCATTGCTTGCCGATATTGTTCTCATTGTCGGGCTGATTTTCTTCTTCTTTTAAATCAGAATTCTCTTTAAAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/774518‑774622‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taaaaaTTTATGGGCCTGGAGCGGCCCATAATTTTTTAAAGAGAATTCTGATTTAAAAGAAGAAGAAAATCAGCCCGACAATGAGAACAATATCGGCAAGCAA < NC_000913/774648‑774552 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |