| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2409477 = | NA (NA) | 6 (0.080) | 3/162 | NT | NA | intergenic (+16/+43) | yfbR/yfbS | 5'‑nucleotidase/putative transporter |
| ? | NC_000913 | 2409508 = | NA (NA) | noncoding (13/19 nt) | REP168 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP168 (repetitive extragenic palindromic) element; contains 1 REP sequences | |||||
CCGTTCACCATTATCGTGATGGCGGTTTGTGTGGTGATGATCCCGATGCTGTTTCCGTTTTGACAAGAGCCTGATGTCGCATCCGGCGCTTATTGCCTGATGCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2409582‑2409477‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatgcgacATCAGGCTCTTGTCAAAACGGAAACAGCATCGGGATCATCACCACACAAACCGCCATCACGATAATGGTGAACGGTACCCCCAACTTCACAAAGTCACT > NC_000913/2409508‑2409606 CCGTTCACCATTATCGTGATGGCGGTTTGTGTGGTGATGATCCCGATGCTGTTTCCGTTTTGACAAGAGCCTGATGTCGCATCCGGCGCTTATTGCCTG > 2:2267731/1‑99CCGTTCACCATTATCGTGATGGCGGTTTGTGTGGTGATGATCCCGATGCTGTTTCCGTTTTGACAAGAGCCTGATGTAGCATCCGGCGCGTATTGCATGA > 2:2171704/1‑100 GTTCACCATTATCGTGATGGCGGTTTGTGTGGTGATGATCCCGATGCTGTTTCCGTTTTGACAAGAGCCTGATGTCGCATCCGGCGCTTATTGCCTGATG < 1:1478282/100‑1 GTTCACCATTATCGTGATGGCGGTTTGTGTGGTGATGATCCCGATGCTGTTTCCGTTTTGACAAGAGCCTGATGTCGCATCCGGCGCTTATTGCCTGATG < 1:2325131/100‑1 CACCATTATCGTGATGGCGGTTTGTGTGGTGATGATCCCGATGCTGTTTCCGTTTTGACAAGAGCCTGATGTCGCATCCGGCGCTTATTGCCTGATGCGA > 1:791470/1‑100 ACCATTATCGTGATGGCGGTTTGTGTGGTGATGATCCCGATGCTGTTTCCGTTTTGACAAGAGCCTGATGTCGCATCCGGCGCTTATTGCCTGATGCGAC < 1:266165/100‑1 ATGTCGCATCCGGCGCTTATTGCCTGATGCGACATCAGGCTCTTGTCAAAACGGAAACAGCATCGTGATCATCACCACACAAACCGCCATCACGATAATG > 1:106745/1‑100 TCGCATCCGGCGCTTATTGCCTGATGCGACATCAGGCTCTTGTCAAAACGGAAACAGCATCGGGATCATCACCACACAAACCGCCATCACGATAATGGTG > 1:1950119/1‑100 CGCATCCGGCGCTTATTGCCTGATGCGACATCAGGCTCTTGTCAAAACGGAAACAGCATCGGGCTCATCACCACACAAACCGCCATCACGATAATGGTGA > 1:1673390/1‑100 CGCATCCGGCGCTTATTGCCTGATGCGACATCAGGCTCTTGTCAAAACGGAAACAGCATCGGGATCATCACCACACAAACCGCCATCACGATAATGGTGA > 1:61974/1‑100 CGCATCCGGCGCTTATTGCCTGATGCGACATCAGGCTCTTGTCAAAACGGAAACAGCATCGGGATCATCACCACACAAACCGCCATCACGATAATGGTGA > 1:358617/1‑100 CGCATCCGGCGCTTATTGCCTGATGCGACATCAGGCTCTTGTCAAAACGGAAACAGCATCGGGATCATCACCACACAAACCGCCATCACGATAATGGTGA > 1:246608/1‑100 GCGACATCAGGCTCTTGTCAAAACGGAAACAGCATCGGGATCATCACCACACAAACCGCCATCACGATAATGGTGAACGGTACCCCCAACTTCACAAAGT < 1:894424/100‑1 CGACATCAGGCTCTTGTCAAAACGGAAACAGCATCGGGATCATCACCACACAAACCGCCATCACGATAATGGTGAACGGTACCCCCAACTTCACAAAGTC < 2:845183/100‑1 GACATCAGGCTCTTGTAAAAACGGAAACAGCATCGGGATCATCACCACACAAACCGCCATCACGATAATGGTGAACGGTACCCCCAACTTCACAAAGTC < 2:154461/99‑1 CATCAGGCTCTTGTCAAAACGGAAACAGCATCGGGATCATCACCACACAAACCGCCATCACGATAATGGTGAACGGTACCCCCAACTTCACAAAGTCACT < 1:954565/100‑1 CATCAGGCTCTTGTCAAAACGGAAACAGCATCGGGATCATCACCACACAAACCGCCATCACGATAATGGTGAACGGTACCCCCAACTTCACAAAGTCACT < 2:677139/100‑1 CCGTTCACCATTATCGTGATGGCGGTTTGTGTGGTGATGATCCCGATGCTGTTTCCGTTTTGACAAGAGCCTGATGTCGCATCCGGCGCTTATTGCCTGATGCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2409582‑2409477‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatgcgacATCAGGCTCTTGTCAAAACGGAAACAGCATCGGGATCATCACCACACAAACCGCCATCACGATAATGGTGAACGGTACCCCCAACTTCACAAAGTCACT > NC_000913/2409508‑2409606 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |