New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2409477 =NA (NA)6 (0.080) 3/162 NT NA intergenic (+16/+43) yfbR/yfbS 5'‑nucleotidase/putative transporter
?NC_000913 2409508 = NA (NA)noncoding (13/19 nt) REP168 (repetitive extragenic palindromic) element; contains 1 REP sequences REP168 (repetitive extragenic palindromic) element; contains 1 REP sequences

TTCCCAGCTTCCATCTTTCGCTCGATGAGATTAGCCAGGATTCACCGCTGTAAGCAGCCGGAGTCTGCGTCGCATCAGGCAATAAGCGCCGGATGCGACATCAGGCTCTTGTCAAAACGGAAACAGCATCGGGATCATCACCACACAAACCGCCATCACGATAATGGTGAACGGTACCCCCAACTTCACAAAGTCACT  >  NC_000913/2409409‑2409606
                                                                                                   |                                                                                                  
ttCCCAGCTTCCATCTTTCGCTCGATGAGATTAGCCAGGATTCACCGCTGTAAGCAGCCGGAGTCTGCGTCGCATCAGGCAATAAGCGCCGGATGCGACa                                                                                                    >  2:1860958/1‑100 (MQ=255)
ttCCCAGCTTCCATCTTTCGCTCGATGAGATTAGCCAGGATTCACCGCTGTAAGCAGCCGGAGTCTGCGTCGCATCAGGCAATAAGCGCCGGATGCGACa                                                                                                    <  1:1708345/100‑1 (MQ=255)
 tCCCAGCTTCCATCTTTCGCTCGATGAGATTAGCCAGGATTCACCGCTGTAAGCAGCCGGAGTCTGCGTCGCATCAGGCAATAAGCGCCGGATGCGACAt                                                                                                   >  2:738812/1‑100 (MQ=255)
 cattatcgtgatggcggtttgtgtggtgatgatcacgatgctgtttccgttttgacaagagcctgatGTCGCATCAGGCAATAAGCGCCGGATGCGACAt                                                                                                   >  1:106745‑M1/68‑100 (MQ=255)
  cccAGCTTCCATCTTTCGCTCGATGAGATTAGCCAGGATTCACCGCTGTAAGCAGCCGGAGTCTGCGTCGCATCAGGCAATAAGCGCCGGATGCGACATc                                                                                                  >  1:1358414/1‑100 (MQ=255)
   ccAGCTTCCAACTTTCACTAGATGAGATTAGCCAGGATTCACCGCTTTAAGCAGCCGGAGTCTGCGTCTTATCAGGCAATAAGCGCCGGATGCGACATCa                                                                                                 >  2:124162/1‑100 (MQ=255)
     aGCTTCCATCTTTCGCTCGATGAGATTAGCCAGGATTCACCGCTGTAAGCAGCCGGAGTCTGCGTCGCATCAGGCAATAAGCGCCGGATGCGACATCAgg                                                                                               <  2:440443/100‑1 (MQ=255)
      gCTTCCATCTTTCGCTCGATGAGATTAGCCAGGATTCACCGCTGTAAGCAGCCGGAGTCTGCGTCGCATCAGGCAATAAGCGCCGGATGCGACATCAGGc                                                                                              <  1:1948270/100‑1 (MQ=255)
      gCTTCCATCTTTCGCTCGATGAGATTAGCCAGGATTCACCGCTGTAAGCAGCCGGAGTCTGCGTCGCATCAGGCAATAAGCGCCGGATGCGACATCAGGc                                                                                              <  1:1765934/100‑1 (MQ=255)
        ttCCATCTTTCGTTCGATGAGATTAGCCAGAATTCACCGCTGTAAACAGCCGGAGTCTTCGTCGCATCAGTCAATAAGCGCCGGATGCGACATCAGGc                                                                                              <  2:190379/98‑1 (MQ=255)
         tCCATCTTTCGCTCGATGAGATTAGCCAGGATTCACCGCTGTAAGCAGCCGGAGTCTGCGTCGCATCCGGCAATAAGCGCCGGATGCGACATCAGGctct                                                                                           >  2:1003263/1‑100 (MQ=255)
         tCCATCTTTCGCTCGATGAGATTAGCCAGGATTCACCGCTGTAAGCAGCCGGAGTCTGCGTCGCATCAGGCAATAAGCGCCGGATGCGACATCAGGctct                                                                                           <  2:113681/100‑1 (MQ=255)
         tCCATCTTTCGCTCGATGAGATTAGCCAGGATTCACCGCTGTAAGCAGCCGGAGTCTGCGTCGCATCAGGCAATAAGCGCCGGATGCGACATCAGGctct                                                                                           <  2:2192077/100‑1 (MQ=255)
          ccATCTTTCGCTCGATGAGATTAGCCAGGATTCACCGCTGTAAGCAGCCGGAGTCTGCGTCGCATCAGGCAATAAGCGCCGGATGCGACATCAGGCTCtt                                                                                          >  1:894945/1‑100 (MQ=255)
           cATCTTTCGCTCGATGAGATTAGCCAGGATTCACCGCTGTAAGCAGCCGGAGTCTGCGTCGCATCAGGCAATAAGCGCCGGATGCGACATCAGGCTCTTg                                                                                         >  2:16477/1‑100 (MQ=255)
           cATCTTTCGCTCGATGAGATTAGCCAGGATTCACCGCTGTAAGCAGCCGGAGTCTGCGTCGCATCAGGCAATAAGCGCCGGATGCGACATCAGGCTCTTg                                                                                         <  1:1369862/100‑1 (MQ=255)
           cATCTTTCGCTCGATGAGATTAGCCAGGATTCACCGCTGTAAGCAGCCGGAGTCTGCGTCGCATCAGGCAATAAGCGCCGGATGCGACATCAGGCTCTTg                                                                                         <  1:1106161/100‑1 (MQ=255)
              tccgatcTCGATGAGATTAGCCAGGATTCACCGCTGTAAGCAGCCGGAGTCTGCGTCGCATCAGGCAATAAGCGCCGGATGCGACATCAGGCTCTTGTCa                                                                                      <  1:16587/94‑1 (MQ=255)
              cTTTCGCTCGATGAGATTAGCCAGGATTCACCGCTGTAAGCAGCCGGAGTCTGCGTCGCATCAGGCAATAAGCGCCGGATGCGACATCAGGCTCTTGTCa                                                                                      >  1:14890/1‑100 (MQ=255)
              cTTTCGCTCGATGAGATTAGCCAGGATTCACCGCTGTAAGCAGCCGGAGTCTGCGTCGCATCAGGCAATAAGCGCCGGATGCGACATCAGGCTCTTGTCa                                                                                      <  1:257526/100‑1 (MQ=255)
              cTTTCGCTCGATGAGATTAGCCAGGATTCACCGCTGTAAGCAGCCGGAGTCTGCGTCGCATCAGGCAATAAGCGCCGGATGCGACATCAGGCTCTTGTCa                                                                                      <  1:1374146/100‑1 (MQ=255)
                  cGCTCGATGAGATTAGCCAGGATTCACCGCTGTAAGCAGCCGGAGTCTGCGTCGCATCAGGCAATAAGCGCCGGATGCGACATCAGGCTCTTGTCAAAAc                                                                                  <  1:21296/100‑1 (MQ=255)
                  cGCTCGATGAGATTAGCCAGGATTCACCGCTATAAGCAGCCGGAGTCTGCGTCGCATCAAGCAATAAGCGCCGTATGCGACATCAGGCTCTTGTCAAAAc                                                                                  <  2:1010793/100‑1 (MQ=255)
                   gCTCGATGAGATTAGCCAGGATTCACCGCTGTAAGCAGCCGGAGTCTGCGTCGCATCAGGCAATAAGCGCCGGATGCGACATCAGGCTCTTGTCAAAACg                                                                                 <  1:891346/100‑1 (MQ=255)
                      cGATGAGATTAGCCAGGATTCACCGCTGTAAGCAGCCGGAGTCTGCGTCGCATCAGGCAATAAGCGCCGGATGCGACATCAGGCTCTTGTCaagatcgga                                                                              >  2:16586/1‑93 (MQ=255)
                       gATGAGATTAGCCAGGATTCGCCGCTGTAAGCAGCCGGAGTCTGCGTCGCATCAGGCAATAAGCGCCGGATGCGACATCAGGCTCTTGTCAAAACGGaga                                                                             >  2:1450047/1‑98 (MQ=255)
                       gATGAGATTAGCCAGGATTCACCGCTGTAAGCAGCCGGAGTCTGCGTCGCATCAGGCAATAAGCGCCGGATGCGACATCAGGCTCTTGTCAAAACGGaaa                                                                             >  1:1457715/1‑100 (MQ=255)
                       gATGAGATTAGCCAGGATTCACCGCTGTAAGCAGCCGGAGTCTGCGTCGCATCAGGCAATAAGCGCCGGATGCGACATCAGGCTCTTGTCAAAACGGaaa                                                                             >  1:1139776/1‑100 (MQ=255)
                        aTGAGATTAGCCAGGATTCACCGCTGTAAGCAGCCGGAGTCTGCGTCGCATCAGGCAATAAGCGCCGGATGCGACATCAGGCTCTTGTCAAAACGGAAAc                                                                            <  2:319518/100‑1 (MQ=255)
                        aTGAGATTAGCCAGGATTCACCGCTGTAAGCAGCCGGAGTCTGCGTCGCATCAGGCAATAAGCGCCGGATGCGACATCAGGCTCTTGTCAAAACGGAAAc                                                                            <  1:1339986/100‑1 (MQ=255)
                                aGCCAGGATTCACCGCTGTAAGCAGCCGGAGTCTGCGTCGCATCAGGCAATAAGCGCCGGATGCGACATCAGGCTCTTGTCAAAACGGAAACAGCATCgg                                                                    <  2:167424/100‑1 (MQ=255)
                                aGCCAGGATTCACCGCTGTAAGCAGCCGGAGTCTGCGTCGCATCAGGCAATAAGCGCCGGATGCGACATCAGGCTCTTGTCAAAACGGAAACAGCATCgg                                                                    >  2:2273254/1‑100 (MQ=255)
                                  ccAGGATTCACCGCTGTAAGCAGCCGGAGTCTGCGTCGCATCAGGCAATAAGCGCCGGATGCGACATCAGGCTCTTGTCAAAACGGAAACAGCATCGGGa                                                                  >  1:1527179/1‑100 (MQ=255)
                                  ccAGGATTCACCGCTGTAAGCAGCCGGAGTCTGCGTCGCATCAGGCAATAAGCGCCGGATGCGACATCAGGCTCTTGTCAAAACGGAAACAGCATCGGGa                                                                  >  1:879428/1‑100 (MQ=255)
                                  ccAGGATTCACCGCTGTAAGCAGCCGGAGTCTGCGTCGCATCAGGCAATAAGCGCCGGATGCGACATCAGGCTCTTGTCAAAACGGAAACAGCATCGGGa                                                                  >  1:771532/1‑100 (MQ=255)
                                  ccAGGATTCACCGCTGTAAGCAGCCGGAGTCTGCGTCGCATCAGGCAATAAGCGCCGGATGCCACATCAGGCTCTTGTCAAAACGGAAAAAGCATCGGGa                                                                  >  1:2258110/1‑100 (MQ=255)
                                     ggATTCACCGCTGTAAGCAGCCGGAGTCTGCGTCGCATCAGGCAATAAGCGCCGGATGCGACATCAGGCTCTTGTCAAAACGGAAACAGCATCGGGatca                                                               <  1:2273275/100‑1 (MQ=255)
                                         tCACCGCTGTAAGCAGCCGGAGTCTGCGTCGCATCAGTCAATAAGCGCCGGATGCGACATCAGGCTCTTGTCAAAACGGAAACAGCATCGTGATCATcac                                                           <  2:539269/100‑1 (MQ=255)
                                         tCACCGCTGTAAGCAGCCGGAGTCTGCGTCGCATCAGGCAATAAGCGCCGGATGCGACATCAGGCTCTTGTCAAAACGGAAACAGCATCGGGATCATcac                                                           <  1:556167/100‑1 (MQ=255)
                                           aCCGCTGTAAGCAGCCGGAGTCTGCGTCGCATCAGGCAATAAGCGCCGGATGCGACATCAGGCTCTTGTCAAAACGGAAACAGCATCGGGATCATcacca                                                         <  1:384157/100‑1 (MQ=255)
                                             cGCTGTAAGCAGCCGGAGTCTGCGTCGCATCAGGCAATAAGCGCCGGATGCGACATCAGGCTCTTGTCAAAACGGAAACAGCATCGGGATCATcaccac                                                        >  1:1104408/1‑99 (MQ=255)
                                             cGCTGTAAGCAGCCGGAGTCTGCGTCGCATCAGGCAATAAGCGCCGGATGCGACATCAGGCTCTTGTCAAAACGGAAACAGCATCGGGATCATCACcaca                                                       >  2:1720804/1‑100 (MQ=255)
                                             cGCTGTAAGCAGCCGGAGTCTGCGTCGCATCAGGCAATAAGCGCCGGATGCGACATCAGGCTCTTGTCAAAACGGAAACAGCATCGGGATCATCACcaca                                                       >  1:1180736/1‑100 (MQ=255)
                                              gCTGTAAGCAGCCGGAGTCTGCGTCGCATCAGGCAATAAGCGCCGGATGCGACATCAGGCTCTTGTCAAAACGGAAACAGCATCGGGATCATcacca                                                         <  2:2099714/97‑1 (MQ=255)
                                              gCTGTAAGCAGCCGGAGTCTGCGTCGCATCAGGCAATAAGCGCCGGATGCGACATCAGGCTCTTGTCAAAACGGAAACAGCATCGGGATCATCACcacac                                                      <  2:605469/100‑1 (MQ=255)
                                              gCTGTAAGCAGCCGGAGTCTGCGTCGCATCAGGCAATAAGCGCCGGATGCGACATCAGGCTCTTGTCAAAACGGAAACAGCATCGGGATCATCACcacac                                                      >  2:2183891/1‑100 (MQ=255)
                                              gCTGTAAGCAGCCGGAGTCTGCGTCGCATCAGGCAATAAGCGCCGGATGCGACATCAGGCTCTTGTCAAAACGGAAACAGCATCGGGATCATCACcacac                                                      <  2:2224601/100‑1 (MQ=255)
                                              gCTGTAAGCAGCCGGAGTCTGCGTCGCATCAGGCAATAAGCGCCGGATGCGACATCAGGCTCTTGTCAAAACGGAAACAGCATCGGGATCATCACcacac                                                      <  2:1129401/100‑1 (MQ=255)
                                               cTGTAAGCAGCCGGAGTCTGCGTCGCATCAGGCAATAAGCGCCGGATGCGACATCAGGCTCTTGTCAAAACGGAAACAGCATCGGGATCATCACcacaca                                                     >  1:387795/1‑100 (MQ=255)
                                                tGTAAGCAGCCGGAGTCTGCGTCGCATCAGGCAATAAGCGCCGGATGCGACATCAGGCTCTTGTCAAAACGGAAACAGCATCGGGATCATCACCACACaa                                                    >  2:673400/1‑100 (MQ=255)
                                                  tAAGCAGCCGGAGTCTGCGTCGCATCAGGCAATAAGCGCCGGATGCGACATCAGGCTCTTGTCAAAACGGAAACAGCATCGGGATCATCACCACACAAAc                                                  >  1:1106202/1‑100 (MQ=255)
                                                  tAAGCAGCCGGAGTCTGCGTCGCATCAGGCAATAAGCGCCGGATGCGACATCAGGCTCTTGTCAAAACGGAAACAGCATCGGGATCATCACCACACAAAc                                                  >  2:2183549/1‑100 (MQ=255)
                                                    agcagcCGGAGTCTGCGTCGCATCAGGCAATAAGCGCCGGATGCGACATCAGGCTCTTGTCAAAACGGAAACAGCATCGGGATCATCACCACACAAACCg                                                <  2:1222296/100‑1 (MQ=255)
                                                    agcagcCGGAGTCTGCGTCGCATCAGGCAATAAGCGCCGGATGCGACATCAGGCTCTTGTCAAAACGGAAACAGCATCGGGATCATCACCACACAAACCg                                                >  2:894422/1‑100 (MQ=255)
                                                     gcagcCGGAGTCTGCGTCGCATCAGGCAATAAGCGCCGGATGCGACATCAGGCTCTTGTCAAAACGGAAACAGCATCGGGATCATCACCACACAAACCGc                                               >  2:797953/1‑100 (MQ=255)
                                                       agcCGGAGTCTGCGTCGCATCAGGCAATAAGCGCCGGATGCGACATCAGGCTCTTGTCAAAACGGAAACAGCATCGGGATCATCACCACACAAACCGCCa                                             <  1:279965/100‑1 (MQ=255)
                                                       agcCGGAGTCTGCGTCGCATCAGGCAATAAGCGCCGGATGCGACATCAGGCTCGTGTCAAAACGGAAACAGCATCGGGATCATCACCACACAAACCGCCa                                             <  2:1325216/100‑1 (MQ=255)
                                                       agacGGAGTCTGCGTCGCATCAGGCAATAAGCGCCGGATGCGACATCAGGCTCTTGTCAAAACGGAAACAGCATCGGGATCATCACCACACAAACCGCCa                                             <  2:2024506/97‑1 (MQ=255)
                                                        gcCGGAGTCTGCGTCGCATCAGGCAATAAGCGCCGGATGCGACATCAGGCTCTTGTCAAAACGGAAACAGCATCGGGATCATCACCACACAAACCGCCAt                                            >  1:1433553/1‑100 (MQ=255)
                                                         ccGGAGTCTGCGTCGCATCAGGCAATAAGCGCCGGATGCGACATCAGGCTCTTGTCAAACCGGAAACAGCATCGGGATCATCACCACACAAACCGCCATc                                           <  1:2069688/100‑1 (MQ=255)
                                                         ccGGAGTCTGCGTCGCATCAGGCAATAAGCGCCGGATGCGACATCAGGCTCTTGTCAAAACGGAAACAGCATCGGGATCATCACCACACAAACCGCCATc                                           >  2:2079260/1‑100 (MQ=255)
                                                            gAGTCTGCGTCGCATCAGGCAATAAGCGCCGGATGCGACATCAGGCTCTTGTCAAAACGGAAACAGCATCGGGATCATCACCACACAAACCGCCATCACg                                        <  2:2117445/100‑1 (MQ=255)
                                                              gTCTGCGTCGCATCAGGCAATAAGCGCCGGATGCGACATCAGGCTCTTGTCAAAACGGAAACAGCATCGGGATCATCACCACACAAACCGCCATCACGAt                                      >  1:1996791/1‑100 (MQ=255)
                                                                cTGCGTCGCATCAGGCAATAAGCGCCGGATGCGACATCAGGCTCTTGTCAAAACGGAAACAGCATCGGGATCATCACCACACAAACCGCCATCACGATa                                     >  2:1657540/1‑99 (MQ=255)
                                                                 tGCGTCGCATCAGGCAATAAGCGCCGGATGCGACATCAGGCTCTTGTCAAAACGGAAACAGCATCGGGATCATCACCACACAAACCGCCATCACGATAAt                                   >  1:2267752/1‑100 (MQ=255)
                                                                  atgtcgcatccggcgcttattgcctgatgcgacATCAGGCTCTTGTCAAAACGGAAACAGCATCGTGATCATCACCACACAAACCGCCATCACGATAATg                                  >  1:106745‑M2/34‑100 (MQ=255)
                                                                   cGTCGCATCAGGCAATAAGCGCCGGATGCGACATCAGGCTCTTGTCAAAACGGAAACAGCATCGGGATCATCACCACACAAACCGCCATCACGATAATgg                                 <  2:2129477/100‑1 (MQ=255)
                                                                    GTCGCATCAGGCAATAAGCGCCGGATGCGACATCAGGCTCTTGTCAAAACGGAAACAGCATCGGGATCATCACCACACAAACCGCCATCACGATAATGGt                                <  1:266165‑M1/100‑1 (MQ=255)
                                                                     tcgcatccggcgcttattgcctgatgcgacATCAGGCTCTTGTCAAAACGGAAACAGCATCGGGATCATCACCACACAAACCGCCATCACGATAATGGTg                               >  1:1950119‑M2/31‑100 (MQ=255)
                                                                     TCGCATCAGGCAATAAGCGCCGGATGCGACATCAGGCTCTTGTCAAAACGGAAACAGCATCGGGATCATCACCACACAAACCGCCATCACGATAATGGTg                               >  1:791470‑M1/1‑100 (MQ=255)
                                                                      cgcatccggcgcttattgcctgatgcgacATCAGGCTCTTGTCAAAACGGAAACAGCATCGGGCTCATCACCACACAAACCGCCATCACGATAATGGTGa                              >  1:1673390‑M2/30‑100 (MQ=255)
                                                                      cgcatccggcgcttattgcctgatgcgacATCAGGCTCTTGTCAAAACGGAAACAGCATCGGGATCATCACCACACAAACCGCCATCACGATAATGGTGa                              >  1:246608‑M2/30‑100 (MQ=255)
                                                                      cgcatccggcgcttattgcctgatgcgacATCAGGCTCTTGTCAAAACGGAAACAGCATCGGGATCATCACCACACAAACCGCCATCACGATAATGGTGa                              >  1:61974‑M2/30‑100 (MQ=255)
                                                                      cgcatccggcgcttattgcctgatgcgacATCAGGCTCTTGTCAAAACGGAAACAGCATCGGGATCATCACCACACAAACCGCCATCACGATAATGGTGa                              >  1:358617‑M2/30‑100 (MQ=255)
                                                                        CATCAGGCAATAAGCGCCGGATGCGACATCAGGCTCTTGTCAAAACGGAAACAGCATCGGGATCATCACCACACAAACCGCCATCACGATAATGGTGAAc                            <  1:2325131‑M1/100‑1 (MQ=255)
                                                                        CATCAGGCAATAAGCGCCGGATGCGACATCAGGCTCTTGTCAAAACGGAAACAGCATCGGGATCATCACCACACAAACCGCCATCACGATAATGGTGAAc                            <  1:1478282‑M1/100‑1 (MQ=255)
                                                                          TCATGCAATACGCGCCGGATGCTACATCAGGCTCTTGTCAAAACGGAAACAGCATCGGGATCATCACCACACAAACCGCCATCACGATAATGGTGAACgg                          >  2:2171704‑M1/1‑100 (MQ=255)
                                                                           CAGGCAATAAGCGCCGGATGCGACATCAGGCTCTTGTCAAAACGGAAACAGCATCGGGATCATCACCACACAAACCGCCATCACGATAATGGTGAACgg                          >  2:2267731‑M1/1‑99 (MQ=255)
                                                                            atctaaTAAGCGCCGGATGCGACATCAGGCTCTTGTCAAAACGGAAACAGCATCGGGATCATCACCACACAAACCGCCATCACGATAATGGTGAACGGTa                        <  1:1437311/96‑1 (MQ=255)
                                                                             ggCAATAAGCGCCGGATGCGACATCAGGCTCTTGTCAAAACGGAAACAGCATCGGGATCATCACCACACAAACCGCCATCACGATAATGGTGAACGGTAc                       >  2:910152/1‑100 (MQ=255)
                                                                             ggCAATAAGCGCCGGATGCGACATCAGGCTCTTGTCAAAACGGAAACAGCATCGGGATCATCACCACACAAACCGCCATCACGATAATGGTGAACGGTAc                       >  1:1593558/1‑100 (MQ=255)
                                                                              gCAATAAGCGCCGGATGCGACATCAGGCTCTTGTCAAAACGGAAACAGCATCGGGATCATCACCACACAAACCGCCATCACGATAATGGTGAACGGTAcc                      <  1:993085/100‑1 (MQ=255)
                                                                                aataatCGCCGGATGCGACATCAGGCTCTTGTCAAAACGGAAACAGCATCGGTATCATCACCACACAAACCGCCATCACGATAATGGTGAACGGTAcccc                    <  1:2069407/100‑1 (MQ=255)
                                                                                aaTAAGCGCCGGATGCGACATCAGGCTCTTGTCAAAACGGAAACAGCATCGGGATCATCACCACACAAACCGCCATCACGATAATGGTGAACGGTaagat                    >  2:1437303/1‑96 (MQ=255)
                                                                                 aTAAGCGCCGGATGCGACATCAGGCTCTTGTCAAAACGGAAACAGCATCGGGATCATCACCACACAAACCGCCATCACGATAATGGTGAACGGTAccccc                   >  1:1047483/1‑100 (MQ=255)
                                                                                    aGCGCCGGATGCGACATCAGGCTCTTGTCAAAACGGAAACAGCATCGGGATCATCACCACACAAACCGCCATCACGATAATGGTGAACGGTACCCCCAAc                >  2:214806/1‑100 (MQ=255)
                                                                                    aGCGCCGGATGCGACATCAGGCTCTTGTCAAAACGGAAACAGCATCGGGATCATCACCACACAAACCGCCATCACGATAATGGTGAACGGTACCCCCAAc                >  1:184679/1‑100 (MQ=255)
                                                                                     gcgcCGGATGCGACATCAGGCTCTTGTCAAAACGGAAACAGCATCGGGATCATCACCACACAAACCGCCATCACGATAATGGTGAACGGTACCCCCAACt               >  2:10809/1‑100 (MQ=255)
                                                                                     gcgcCGGATGCGACATCAGGCTCTTGTCAAAACGGAAACAGCATCGGGATCATCACCACACAAACCGCCATCACGATAATGGTGAACGGTACCCCCAACt               >  1:519710/1‑100 (MQ=255)
                                                                                       gcCGGATGCGACATCAGGCTCTTGTCAAAACGGAAACAGCATCGGGATCATCACCACACAAACCGCCATCACGATAATGGTGAACGGTACCCCCAACTTc             <  2:1334990/100‑1 (MQ=255)
                                                                                       gcCGGATGCGACATCAGGCTCTTGTCAAAACGGAAACAGCATCGGGATCATCACCACACAAACCGCCATCACGATAATGGTGAACGGTACCCCCAACTTc             <  2:266163/100‑1 (MQ=255)
                                                                                        ccGGATGCGACATCAGGCTCTTGTCAAAACGGAAACAGCATCGGGATCATCACCACACAAACCGCCATCACGATAATGGTGAACGGTACCCCCAACTTca            >  1:215539/1‑100 (MQ=255)
                                                                                          ggATGCGACATCAGGCTCTTGTCAAAACGGAAACAGCATCGGGATCATCACCACACAAACCGCCATCACGATAATGGTGAACGGTACCCCCAACTTcaca          <  2:1261628/100‑1 (MQ=255)
                                                                                              gcgacATCAGGCTCTTGTCAAAACGGAAACAGCATCGGGATCATCACCACACAAACCGCCATCACGATAATGGTGAACGGTACCCCCAACTTCACAAAGt      <  1:894424‑M2/95‑1 (MQ=255)
                                                                                               cgacATCAGGCTCTTGTCAAAACGGAAACAGCATCGGGATCATCACCACACAAACCGCCATCACGATAATGGTGAACGGTACCCCCAACTTCACAAAGTc     <  2:845183‑M2/96‑1 (MQ=255)
                                                                                                gacATCAGGCTCTTGTAAAAACGGAAACAGCATCGGGATCATCACCACACAAACCGCCATCACGATAATGGTGAACGGTACCCCCAACTTCACAAAGTc     <  2:154461‑M2/96‑1 (MQ=255)
                                                                                                  cATCAGGCTCTTGTCAAAACGGAAACAGCATCGGGATCATCACCACACAAACCGCCATCACGATAATGGTGAACGGTACCCCCAACTTCACAAAGTCACt  <  2:677139‑M2/99‑1 (MQ=255)
                                                                                                  cATCAGGCTCTTGTCAAAACGGAAACAGCATCGGGATCATCACCACACAAACCGCCATCACGATAATGGTGAACGGTACCCCCAACTTCACAAAGTCACt  <  1:954565‑M2/99‑1 (MQ=255)
                                                                                                   |                                                                                                  
TTCCCAGCTTCCATCTTTCGCTCGATGAGATTAGCCAGGATTCACCGCTGTAAGCAGCCGGAGTCTGCGTCGCATCAGGCAATAAGCGCCGGATGCGACATCAGGCTCTTGTCAAAACGGAAACAGCATCGGGATCATCACCACACAAACCGCCATCACGATAATGGTGAACGGTACCCCCAACTTCACAAAGTCACT  >  NC_000913/2409409‑2409606

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.