New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2700643	38 (0.440)	7 (0.090)	4/168	NT	15.6%	coding (356/381 nt)	acpS	holo‑[acyl‑carrier‑protein] synthase 1
	?	NC_000913	= 2700650	40 (0.490)					coding (349/381 nt)	acpS	holo‑[acyl‑carrier‑protein] synthase 1

AAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/2700540‑2700643 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcacTATGC‑TTGTGCCACGGTAATTATTGAAAGTTAAAAATAATACCGTTCTCTTTAAAAAGTAAAACCCCCGAACTGGTAAGGAAC  <  NC_000913/2700650‑2700568                                                                                                                                                                                              AAAATTAAAGTTAAAAAGTAAAACCTCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACTGTATTATTTTTAACTTTCAATAATTACCGTG                                                                                          <  2:1102148/100‑1  AAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGG                                                                                         <  1:1730092/100‑1  AAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGG                                                                                         <  1:201229/100‑1  AAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGG                                                                                         <  1:540013/100‑1   AATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGC                                                                                        <  2:1936497/100‑1    ATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCA                                                                                       <  2:989317/100‑1     TTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCAC                                                                                      <  2:1525356/100‑1                     aatCCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACTATGC‑TTGTGCCACGG                                                                     <  2:999947/97‑1                      AACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACTATGC‑TTGTGCCACGG                                                                     <  1:348104/99‑1                      AACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACTATGC‑TTGTGCCACGG                                                                     <  1:717269/99‑1                      AACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACTATGC‑TTGTGCCACGG                                                                     <  2:423059/99‑1                                                                      GTATTATTTTTAACTTTCAATAATTACCGTGGCAC‑AAGCATAGTGCCACGGTAATTATTGAAAGTTAAAAATAATACCGTTCTCTTTAAAAAGTAAAACC                    >  1:1810235/1‑100                                                                                      TCAATAATTACCGTGGCAC‑AAGCATAGTGCCACGGTAATTATTGAAAGTTAAAAATAATACCGTTCTCTTTAAAAAGTAAAACCCCCGAACTGGTAAGGA    >  1:1469228/1‑100                                                                                        AATAATTACCGTGGCACAAGCA‑TAGTGCCACGGTAATTATTGAAAGTTAAAAATAATACCGTTCTCTTTAAAAAGTAAAACCCCCGAACTGGTAAGGAAC  >  1:1292239/1‑100                                                                                                                                                                                              AAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/2700540‑2700643 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcacTATGC‑TTGTGCCACGGTAATTATTGAAAGTTAAAAATAATACCGTTCTCTTTAAAAAGTAAAACCCCCGAACTGGTAAGGAAC  <  NC_000913/2700650‑2700568

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.