New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3299599 =70 (0.820)16 (0.210) 8/158 NT 20.2% coding (317/444 nt) yhbP UPF0306 family protein
?NC_000913 3299641 = 64 (0.840)coding (275/444 nt) yhbP UPF0306 family protein

Only 100 of 130 total aligned reads displayed.

AGCCAAATCATTTTTTTACCAAAGCCCAGCGTGTTGTCGGTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCGAATTAACGCTACCG  >  NC_000913/3299500‑3299698
                                                                                                   |                                                                                                   
ncaggctgcggttgccggaacggtaaacggtcagccgaaaacggtagcgttaattcgcggtgtgcagtttaaaggtgagatccgcaggctggaaggtgag                                                                                                     <  1:684683‑M1/1‑1 (MQ=255)
ccgatctgcggttgccggaacggtaaacggtcagccgaaaacggtagcgttaattcgcggtgtgcagtttaaaggtgagatccgcaggctggaaggtgag                                                                                                     >  1:2032391‑M1/100‑100 (MQ=255)
ccgatctgcggttgccggaacggtaaacggtcagccgaaaacggtagcgttaattcgcggtgtgcagtttaaaggtgagatccgcaggctggaaggtgag                                                                                                     >  1:2035274‑M1/100‑100 (MQ=255)
   cAAATCATTTTTTTACCAAAGCCCAGCGTGTTGTCGGTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAA                                                                                                  <  1:497764‑M1/100‑1 (MQ=255)
    aaaTCATTTTTTTACCAAAGCCCAGCGTGTTGTCGGTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAA                                                                                                 <  1:1847070‑M1/100‑1 (MQ=255)
     ctgcggttgccggaacggtaaacggtcagccgaaaacggtagcgttaattcgcggtgtgcagtttaaaggtgagatccgcaggctggaaggtgaGGAAAg                                                                                                <  2:928495‑M1/6‑1 (MQ=255)
     ctgcggttgccggaacggtaaacggtcagccgaaaacggtagcgttaattcgcggtgtgcagtttaaaggtgagatccgcaggctggaaggtgaGGAAAg                                                                                                <  2:205425‑M1/6‑1 (MQ=255)
      aTCATTTTTTTACCAAAGCCCAGCGTGTTGTCGGTGAATTTGATTTCATAGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAG                                                                                                >  1:2114229‑M1/1‑99 (MQ=255)
       tCATTTTTTTACCAAAGCCCAGCGTGTTGTCGGTGAATTTGATTTCATCGAGACGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCG                                                                                              <  1:285184‑M1/100‑1 (MQ=255)
       gcggttgccggaacggtaaacggtcagccgaaaacggtagcgttaattcgcggagtgcagattaaaggtgagatccgcaggctggaaggtgagagatcgg                                                                                              <  2:2035256‑M1/8‑8 (MQ=255)
        cggttgccggaacggtaaacggtcagccgaaaacggtagcgttaattcgcggtgtgcagtttaaaggtgagatccgcaggctggaaggtgaGGAAAGcga                                                                                             >  1:205426‑M1/92‑100 (MQ=255)
        cATTTTTTTACCAAAGCCCAGCGTGTTGTCGGTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCG                                                                                              >  2:208725‑M1/1‑99 (MQ=255)
         ggttgccggaacggtaaacggtcagccgaaaacggtagcgttaattcgcggtgtgcagtttaaaggtgagatccgcaggctggaaggtgaGGAAAGcgac                                                                                            >  1:717490‑M1/91‑100 (MQ=255)
         ggttgccggaacggtaaacggtcagccgaaaacggtagcgttaattcgcggtgtgcagtttaaaggtgagatccgcaggctggaaggtgaGGAAAGcgac                                                                                            >  1:1407184‑M1/91‑100 (MQ=255)
         ggttgccggaacggtaaacggtcagccgaaaacggtagcgttaattcgcggtgtgcagtttaaaggtgagatccgcaggctggaaggtgaGGAAAGcgac                                                                                            <  1:1435746‑M1/10‑1 (MQ=255)
          tttttttACCAAAGCCCAGCGTGTTGTCGGTTAATTTGATTTCATCGAACCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAAATCGAAAGCGAC                                                                                            >  2:1669236‑M1/1‑99 (MQ=255)
            tttttACCAAAGCCCAGCGTGTTGTCGGTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGAt                                                                                         >  2:2320042/1‑100 (MQ=255)
             ttttACCAAAGCCCAGCGTGTTGTCGGTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGAtt                                                                                        >  1:2020388/1‑100 (MQ=255)
              tttACCAAAGCCCAGCGTGTTGTCGGTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTg                                                                                       >  1:85288/1‑100 (MQ=255)
              tttACCAAAGCCCAGCGTGTCGTCGGTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAac                                                                                               >  2:744484‑M1/1‑90 (MQ=255)
                 aCCAAAGCCCAGCGTGTTGTCGGTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTAc                                                                                    <  1:1053561/100‑1 (MQ=255)
                 aCCAAAGCCCAGCGTGTTGTCGGTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTAc                                                                                    <  1:1053332/100‑1 (MQ=255)
                  ccAAAGCCCAGCGTGTTGTCGGTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACg                                                                                   >  2:542427/1‑100 (MQ=255)
                  ccAAAGCCCAGCGTGTTGTCGGTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACg                                                                                   >  2:1740376/1‑100 (MQ=255)
                  ccAAAGCCCAGCGTGTTGTCGGTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACg                                                                                   >  1:1600971/1‑100 (MQ=255)
                     aaGCCCAGCGTGTTGTCGGTGAATTTGATTTCATCGAGCCGGATTTCCCACCCCGGGGTCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGcc                                                                                 <  1:871914/99‑1 (MQ=255)
                         ccAGCGTGTTGTCGGTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTgcg                                                                            >  1:1796605/1‑100 (MQ=255)
                         ccAGCGTGTTGTCGGTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTgcg                                                                            >  2:594004/1‑100 (MQ=255)
                         ccAGCGTGTTGTCGGTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTgcg                                                                            >  2:1168479/1‑100 (MQ=255)
                             cGTGTTGTCGGTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGcgcgcg                                                                        <  1:1392326/100‑1 (MQ=255)
                               tgttgtCGGTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAg                                                                      <  1:2094976/100‑1 (MQ=255)
                                gttgtCGGTGACTTTGATTTCATCGAGCCGGATGTCGCACACCGGGGTCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAg                                                                      <  2:516261/99‑1 (MQ=255)
                                  tgtCGGTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGgtc                                                                   <  2:882360‑M2/100‑4 (MQ=255)
                                     cGGTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGTGCGCGAGgtcgct                                                                <  1:2135801‑M2/100‑7 (MQ=255)
                                      ggTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGgtcgctt                                                               >  1:1886680‑M2/1‑93 (MQ=255)
                                       gTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGgtcgcttt                                                              <  2:1344317‑M2/100‑9 (MQ=255)
                                       aacggtagcgttaattcgcggtgtgcagtttaaaggtgagatccgcaggctggaaggtgaGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCttt                                                              >  1:1384964‑M1/61‑100 (MQ=255)
                                        ttaattTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACctcgcgcgcaaggcgtacaatcgtcgctttc                                                             <  1:1632461‑M1/98‑32 (MQ=255)
                                        tGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACctcgcgcgcaaggcgtacaatcgtcgctttc                                                             <  2:389568‑M1/100‑32 (MQ=255)
                                         gAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACctcgcgcgcaaggcgtacaatcgtcgctttcc                                                            <  1:2181022‑M1/100‑33 (MQ=255)
                                         gAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGgtcgctttcc                                                            >  1:2248626‑M2/1‑90 (MQ=255)
                                         gAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGgtcgctttcc                                                            <  2:1401658‑M2/100‑11 (MQ=255)
                                         gAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGgtcgctttcc                                                            >  1:2320063‑M2/1‑90 (MQ=255)
                                         cggtagcgttaattcgcggtgtgcagtttaaaggtgagatccgcaggctggaaggtgaGGAGAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTcc                                                            >  2:1864939‑M1/59‑100 (MQ=255)
                                         cggtagcgttaattcgcggtgtgcagtttaaaggtgagatccgcaggctggaaggtgaGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTGGCTTTcc                                                            >  1:1250769‑M1/59‑100 (MQ=255)
                                         cggtagcgttaattcgcggtgtgcagtttaaaggtgagatccgcaggctggaaggtgaGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTcc                                                            >  2:1827755‑M1/59‑100 (MQ=255)
                                         cggtagcgttaattcgcggtgtgcagtttaaaggtgagatccgcaggctggaaggtgaGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTcc                                                            >  2:1508528‑M1/59‑100 (MQ=255)
                                          ggtagcgttaattcgcggtgtgcagtttaaaggtgagatccgcaggctggaaggtgaGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTcc                                                            >  2:575142‑M1/58‑99 (MQ=255)
                                          ggtagcgttaattcgcggtgtgcagtttaaaggtgagatccgcaggctggaaggtgaGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCt                                                           >  2:202827‑M1/58‑100 (MQ=255)
                                          ggtagcgttaattcgcggtgtgcagtttaaaggtgagatccgcaggctggaaggtgaGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCt                                                           >  1:1059012‑M1/58‑100 (MQ=255)
                                          aaTTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCt                                                           <  1:1844870/100‑1 (MQ=255)
                                           aTTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACctcgcgcgcaaggcgtacaatcgtcgctttccgg                                                          <  1:288513‑M1/100‑35 (MQ=255)
                                           aTTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTc                                                          <  2:171325/100‑1 (MQ=255)
                                           aTTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTc                                                          <  2:159975/100‑1 (MQ=255)
                                           aTTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTc                                                          >  2:533366/1‑100 (MQ=255)
                                            tagcgttaattcgcggtgtgcagtttaaaggtgagatccgcaggctggaaggtgaGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCa                                                         >  1:1860477‑M1/56‑100 (MQ=255)
                                             agcgttaattcgcggtgtgcagtttaaaggtgagatccgcaggctggaaggtgaGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTcan                                                        >  1:2111919‑M1/55‑99 (MQ=255)
                                               gATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCt                                                      >  2:862054/1‑100 (MQ=255)
                                                aTTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCtt                                                     >  1:2156533/1‑100 (MQ=255)
                                                aTTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCtt                                                     >  1:1688338/1‑100 (MQ=255)
                                                 tttCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGTCTTGCGCGCGAGGTCGCTTTCCTCACCTTc                                                    >  1:2387372/1‑100 (MQ=255)
                                                 tttCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTc                                                    >  2:1150076/1‑100 (MQ=255)
                                                  ttCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTcc                                                   <  1:535763/100‑1 (MQ=255)
                                                   tCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCCCGAGGTCGCCTTCCTCACCTTCCa                                                  >  2:1354076/1‑100 (MQ=255)
                                                     aTCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGc                                                <  2:2187086/100‑1 (MQ=255)
                                                     aTCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGc                                                >  1:1705284/1‑100 (MQ=255)
                                                      tCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGcc                                               >  2:308225/1‑100 (MQ=255)
                                                      tCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGcc                                               <  2:2318482/100‑1 (MQ=255)
                                                        gcggtgtgtagtttaaaggtgagatccgcaggctggaaggtgaGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCt                                              >  2:1017194‑M1/44‑99 (MQ=255)
                                                        gAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTg                                             >  2:1153946/1‑100 (MQ=255)
                                                         cggtgtgcagtttaaaggtgagatccgcaggctggaaggtgaGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCt                                              >  2:1017300‑M1/43‑98 (MQ=255)
                                                         aGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGc                                            >  1:624683/1‑100 (MQ=255)
                                                         aGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGc                                            <  2:144507/100‑1 (MQ=255)
                                                         aGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGc                                            <  2:2238621/100‑1 (MQ=255)
                                                          gCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCTTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCg                                           <  2:1467557/100‑1 (MQ=255)
                                                          gCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCg                                           >  2:1704026/1‑100 (MQ=255)
                                                            cGGGTTTCCCACACCGGGGCCGCCAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGa                                         <  2:1605771/100‑1 (MQ=255)
                                                             ggATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGAt                                        <  1:700649/100‑1 (MQ=255)
                                                               aTTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGAtct                                      >  1:1495050/1‑100 (MQ=255)
                                                               aTTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGAtct                                      >  1:971590/1‑100 (MQ=255)
                                                                   cccACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCAcc                                  <  1:1800381/100‑1 (MQ=255)
                                                                     cacaCCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCtt                                <  1:2046162/100‑1 (MQ=255)
                                                                          cGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAAc                           <  1:234888/100‑1 (MQ=255)
                                                                          cGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAAc                           <  1:217854/100‑1 (MQ=255)
                                                                             ggCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGc                        <  2:513545/100‑1 (MQ=255)
                                                                             ggCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGc                        <  1:2256421/100‑1 (MQ=255)
                                                                                     gCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACcgcg                <  1:2328321/100‑1 (MQ=255)
                                                                                     gCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACcgcg                >  2:154523/1‑100 (MQ=255)
                                                                                      cATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCGa               >  1:1225989/1‑100 (MQ=255)
                                                                                       aTTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCGaa              >  1:476891/1‑100 (MQ=255)
                                                                                       aTTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCGaa              >  1:688678/1‑100 (MQ=255)
                                                                                             gCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCGAATTAACg        <  1:1811694/100‑1 (MQ=255)
                                                                                                aCCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCGAATTAACGCTa     >  1:1203345/1‑100 (MQ=255)
                                                                                                 ccGGAAAGCGACGATTGTACGCCTTGCGCGCGAGgtcgctttccggttgccagaatgctgtcggccccggtgtgggaaatccggctcgatgaaatcaaat    <  1:288513‑M2/100‑67 (MQ=255)
                                                                                                  cGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCGAATTAACGCTAcc   >  2:36543/1‑100 (MQ=255)
                                                                                                  cGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCGAATTAACGCTAcc   >  1:1399750/1‑100 (MQ=255)
                                                                                                  cGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCGAATTAACGCAAcc   >  1:1273145/1‑100 (MQ=255)
                                                                                                   ggAAAGCGACctcgcgcgcaaggcgtacaatcgtcgctttccggttgccagaatgctgtcggccccggtgtgggaaatccggctcgatgaaatcaaattc  >  1:2248626‑M1/1‑10 (MQ=255)
                                                                                                   ggAAAGCGACctcgcgcgcaaggcgtacaatcgtcgctttccggttgccagaatgctgtcggccccggtgtgggaaatccggctcgatgaaatcaaattc  <  2:1401658‑M1/100‑91 (MQ=255)
                                                                                                   ggAAAGCGACGATTGTACGCCTTGCGCGCGAGgtcgctttccggttgccagaatgctgtcggccccggtgtgggaaatccggctcgatgaaatcaaattc  <  1:2181022‑M2/100‑69 (MQ=255)
                                                                                                   |                                                                                                   
AGCCAAATCATTTTTTTACCAAAGCCCAGCGTGTTGTCGGTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCGAATTAACGCTACCG  >  NC_000913/3299500‑3299698

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.