| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC | NC_000913 | 3,596,220 | (TCA)3→2 | 100% | coding (182‑184/927 nt) | livH ← | branched‑chain amino acid ABC transporter permease |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3596215 = | 2 (0.020) | 97 (1.240) | 61/162 | NT | 98.1% | coding (189/927 nt) | livH | branched‑chain amino acid ABC transporter permease |
| ? | NC_000913 | = 3596211 | 2 (0.030) | coding (193/927 nt) | livH | branched‑chain amino acid ABC transporter permease | |||||
Only 100 of 117 total aligned reads displayed.
TAAGCCACCCGTTCGATACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATG > NC_000913/3596117‑3596314 | cggtaagccacccgttcgatactccagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccca > 1:1772713‑M1/99‑100 (MQ=255) gtaagccacccgttcgatactccagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgcccatc < 1:5920‑M1/4‑1 (MQ=255) taagccacccgttcgatactccagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccca < 2:2236284‑M1/2‑1 (MQ=255) ccACCCGGTCGATACCACACCCGTAGGCGCTGGCAACTACCATTGCGCCGACGAATCCCTCAGCTACCAGCAGCCAGCCGGTAGCAATGCCcatcatcag > 2:791774/1‑99 (MQ=255) gccacccgttcgatactccagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCAtcatca > 1:1014648‑M1/93‑100 (MQ=255) gccacccgttcgatactccagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCAtcatca < 2:1468012‑M1/8‑1 (MQ=255) gccacccgttcgatactccagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCAtcatca < 2:2212784‑M1/8‑1 (MQ=255) cacccgttcgatactccagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccaccagccagccggtatcaatgccCATCATCAgc < 2:2268282‑M1/10‑1 (MQ=255) ttCGATACTCCAGCCGCAGGAAATGTCAATGACAAATGCGCCGACGCATCCCGCAGCTACCAGCAGCTAGCCGGTATCAATGCCcagcattagcgg < 2:1633146/96‑7 (MQ=255) gttcgatactccagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagcctgtatcaatgccCATCATCAGCgcggc > 1:1448287‑M1/86‑100 (MQ=255) gttcgatactccagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCgcggc > 2:1808476‑M1/86‑100 (MQ=255) ttcgatactccagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCgcggcg < 2:1480688‑M1/16‑1 (MQ=255) ttcgatactccagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCgcggcg > 1:2141731‑M1/85‑100 (MQ=255) tcgatactccagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCga > 2:888645‑M1/84‑100 (MQ=255) cgatactccagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctatcagcagccagccggtatcaatgccCATCATCAGCGCGGCgat < 2:1673253‑M1/18‑1 (MQ=255) cgatactccagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCgat < 1:876572‑M1/18‑1 (MQ=255) gatactccagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGcgatn > 2:1970094‑M1/82‑99 (MQ=255) gatactccagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCgatg < 1:1111506‑M1/19‑1 (MQ=255) gatactccagccgtaggcgctgacaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCgatg < 2:1380382‑M1/19‑1 (MQ=255) atactccagccgtaggcgctggcaatgacgatttcgccgacgaatcccgcagctaccagcagccagcctgtatcaatgccCATCATCAGCGCGGCgatga < 2:1603653‑M1/20‑1 (MQ=255) tactccagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCgatgat > 2:1631458‑M1/80‑100 (MQ=255) tactccagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCgatgat > 2:47511‑M1/80‑100 (MQ=255) actccagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATc > 2:281396‑M1/79‑100 (MQ=255) ctccagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCa < 1:283927‑M1/23‑1 (MQ=255) tccagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCAt < 1:304537‑M1/24‑1 (MQ=255) ccagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATa < 2:1261985‑M1/25‑1 (MQ=255) ccagccggaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATa < 1:1251489‑M1/25‑1 (MQ=255) cagccgtgcgcgctggcaatgacgattgcgccgacgcatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATaa > 2:551527‑M1/75‑100 (MQ=255) cagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATaa < 1:2120237‑M1/26‑1 (MQ=255) gccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAAt > 1:991552‑M1/73‑100 (MQ=255) ccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATg > 1:15453‑M1/72‑100 (MQ=255) cgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATga > 1:764963‑M1/71‑100 (MQ=255) gtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATgag > 2:510122‑M1/70‑100 (MQ=255) gtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATgag > 2:1807066‑M1/70‑100 (MQ=255) taggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATgaga > 1:1225130‑M1/69‑100 (MQ=255) taggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATgaga > 2:1715424‑M1/69‑100 (MQ=255) ggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGGTGATCATAaatgagccg < 2:254469‑M1/34‑4 (MQ=255) gctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAg < 2:1680920‑M1/37‑1 (MQ=255) tggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCt < 2:127091‑M1/39‑1 (MQ=255) ggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTg > 1:505118‑M1/61‑100 (MQ=255) caatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGcc < 1:972577‑M1/42‑1 (MQ=255) caatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGcc > 2:1815018‑M1/59‑100 (MQ=255) caatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGcc > 2:65654‑M1/59‑100 (MQ=255) caatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGcc > 1:266089‑M1/59‑100 (MQ=255) tgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAAt < 1:394360‑M1/45‑1 (MQ=255) tgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAAt < 2:1195941‑M1/45‑1 (MQ=255) tgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAAt < 1:2318667‑M1/45‑1 (MQ=255) gacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATc > 2:1019848‑M1/55‑100 (MQ=255) gacgacggcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGAGGATCATAAATGAGACGTAGCTGCCAAt > 2:2009437‑M1/55‑99 (MQ=255) acgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCa > 2:848635‑M1/54‑100 (MQ=255) acgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCa > 1:1755037‑M1/54‑100 (MQ=255) acgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCa > 2:283925‑M1/54‑100 (MQ=255) cgattgcgccgacgaatcccgcagctaccagtagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCat < 2:2214450‑M1/48‑1 (MQ=255) cgattgcgccgacgaatcccgcagctaccagcagcgagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATc > 2:2112299‑M1/53‑98 (MQ=255) cgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCa > 2:1414103‑M1/53‑99 (MQ=255) attgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCatat > 1:258114‑M1/51‑100 (MQ=255) attgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCatat < 1:1897567‑M1/50‑1 (MQ=255) attgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCatat > 1:1475632‑M1/51‑100 (MQ=255) attgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCatat > 1:1523097‑M1/51‑100 (MQ=255) agtgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCatat > 1:1046212‑M1/51‑100 (MQ=255) ttgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCAtata > 2:235023‑M1/50‑100 (MQ=255) gccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAAcc > 1:798632‑M1/46‑100 (MQ=255) gaggaATGCCCCATCTGCTAGCAGCCAGCTCGTATCAATGGC‑‑‑CATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAAGCa < 2:2274756/86‑1 (MQ=255) acgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGc > 1:2021777‑M1/42‑100 (MQ=255) cgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGcc < 2:1239327‑M1/60‑1 (MQ=255) cgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGAAGTAGCTGCCAATCATataaacatagc < 2:2073853‑M1/59‑6 (MQ=255) atcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTg < 1:30270‑M1/63‑1 (MQ=255) atcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGATGCCAATCATATAAACCTCGCCGTg < 2:1181212‑M1/63‑1 (MQ=255) cccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTggg > 2:86337‑M1/36‑100 (MQ=255) cccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTggg < 2:1729543‑M1/65‑1 (MQ=255) cccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTggg < 1:1845649‑M1/65‑1 (MQ=255) cccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTggg > 1:2187223‑M1/36‑100 (MQ=255) cccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTggg < 2:1972233‑M1/65‑1 (MQ=255) ccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTgg < 2:1096500‑M1/64‑1 (MQ=255) ccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGc < 2:1386145‑M1/66‑1 (MQ=255) gctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGt > 2:2152520‑M1/30‑100 (MQ=255) ctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGtt < 2:976462‑M1/72‑1 (MQ=255) taccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTg > 2:1421726‑M1/28‑100 (MQ=255) taccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTg > 2:1909772‑M1/28‑100 (MQ=255) ncagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGAt < 2:748469‑M1/75‑1 (MQ=255) ccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGAt > 1:387429‑M1/26‑100 (MQ=255) ccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGAt < 1:1934091‑M1/75‑1 (MQ=255) cagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATc > 1:42592‑M1/25‑100 (MQ=255) agcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCa < 1:1867658‑M1/77‑1 (MQ=255) ccagccGGTATCAATGCC‑‑‑CATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACTTCGCCCACGGCGAGGtttatatgattg < 1:545729/100‑11 (MQ=21) agccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGc < 1:1548586‑M1/80‑1 (MQ=255) agccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGc > 1:54786‑M1/21‑100 (MQ=255) cagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGa < 2:1988542‑M1/83‑1 (MQ=255) cagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGa > 2:1798284‑M1/18‑100 (MQ=255) agccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGAt < 1:209332‑M1/84‑1 (MQ=255) tatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGcc > 2:1062313‑M1/11‑100 (MQ=255) tcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGt > 1:617503‑M1/9‑100 (MQ=255) caatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTa > 1:8437‑M1/8‑100 (MQ=255) caatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTa < 1:1489811‑M1/93‑1 (MQ=255) caatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTa < 1:1169860‑M1/93‑1 (MQ=255) atgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTaaa < 1:2161662‑M1/95‑1 (MQ=255) atgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTaaa < 2:551991‑M1/95‑1 (MQ=255) tcatcatcaGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCAt > 2:372756/1‑100 (MQ=255) catcatcaGCGCGGCGATGATCATAAATGCGACGTAGCTGCCACTCATCTAACCCTCGCCGTGGGCGAAGTTTATCCTGCCGATACTGCCGTACACCATg > 2:369192/1‑100 (MQ=255) CATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATg < 2:1265247‑M1/100‑1 (MQ=255) | TAAGCCACCCGTTCGATACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATG > NC_000913/3596117‑3596314 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |