| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC | NC_000913 | 3,596,220 | (TCA)3→2 | 100% | coding (182‑184/927 nt) | livH ← | branched‑chain amino acid ABC transporter permease |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3596215 = | 2 (0.020) | 97 (1.240) | 61/162 | NT | 98.1% | coding (189/927 nt) | livH | branched‑chain amino acid ABC transporter permease |
| ? | NC_000913 | = 3596211 | 2 (0.030) | coding (193/927 nt) | livH | branched‑chain amino acid ABC transporter permease | |||||
Only 100 of 115 total aligned reads displayed.
GGCGGTAAGCCACCCGTTCGATACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTA > NC_000913/3596112‑3596307 | gCGGTAAGCCACCCGTTCGATACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCc > 1:1350743‑M2/1‑99 (MQ=255) cGGTAAGCCACCCGTTCGATACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCca > 1:1991881‑M2/1‑98 (MQ=255) gTAAGCCACCCGTTCGATACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatc < 1:5920‑M2/100‑5 (MQ=255) tAAGCCACCCGTTCGATACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCca < 2:2236284‑M2/97‑3 (MQ=255) gCCACCCGTTCGATACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatca > 1:1014648‑M2/1‑92 (MQ=255) gCCACCCGTTCGATACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatca < 2:1468012‑M2/100‑9 (MQ=255) gCCACCCGTTCGATACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatca < 2:376115‑M2/100‑9 (MQ=255) ccACCCGGTCGATACCACACCCGTAGGCGCTGGCAACTACCATTGCGCCGACGAATCCCTCAGCTACCAGCAGCCAGCCGGTAGCAATGCCcatcatcag > 2:791774/1‑99 (MQ=255) cACCCGTTCGATACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCACCAGCCAGCCGGTATCAATGCCcatcatcagc < 2:2268282‑M2/100‑11 (MQ=255) cGTTCGATACGCCAGCCGTAAGACCTGGCAATGACGATTGCGCCGACGAATCCCGCCGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcgg < 2:1715739‑M2/100‑15 (MQ=255) gTTCGATACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggc > 2:1808476‑M2/1‑85 (MQ=255) ttCGATACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcg < 2:1480688‑M2/100‑17 (MQ=255) ttCGATACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcg > 1:2141731‑M2/1‑84 (MQ=255) ttCGATACTCCAGCCGCAGGAAATGTCAATGACAAATGCGCCGACGCATCCCGCAGCTACCAGCAGCTAGCCGGTATCAATGCCcagcattagcgg < 2:1633146/96‑7 (MQ=255) tCGATACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcga > 2:888645‑M2/1‑83 (MQ=255) cGATACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTATCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgat < 2:1673253‑M2/100‑19 (MQ=255) cGATACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgat < 1:876572‑M2/100‑19 (MQ=255) gATACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatn > 2:1970094‑M2/1‑81 (MQ=255) gATACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatg < 1:1111506‑M2/100‑20 (MQ=255) gATACTCCAGCCGTAGGCGCTGACAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatg < 2:1380382‑M2/100‑20 (MQ=255) aTACTCCAGCCGTAGGCGCTGGCAATGACGATTTCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCTGTATCAATGCCcatcatcagcgcggcgatga < 2:1603653‑M2/100‑21 (MQ=255) tACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgat > 2:47511‑M2/1‑79 (MQ=255) tACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgat > 2:1631458‑M2/1‑79 (MQ=255) cTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatca < 1:283927‑M2/100‑24 (MQ=255) cTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatca < 2:2300006‑M2/100‑24 (MQ=255) tCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcat < 1:304537‑M2/100‑25 (MQ=255) ccAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcata < 2:1261985‑M2/100‑26 (MQ=255) ccAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcata < 1:940930‑M2/100‑26 (MQ=255) ccAGCCGGAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcata < 1:1251489‑M2/100‑26 (MQ=255) cAGCCGTGCGCGCTGGCAATGACGATTGCGCCGACGCATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataa > 2:551527‑M2/1‑74 (MQ=255) cAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataa < 1:2120237‑M2/100‑27 (MQ=255) gCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaat > 1:991552‑M2/1‑72 (MQ=255) ccGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatg > 1:15453‑M2/1‑71 (MQ=255) gTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgag > 2:510122‑M2/1‑69 (MQ=255) gTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgag > 2:1807066‑M2/1‑69 (MQ=255) tAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgaga > 2:1715424‑M2/1‑68 (MQ=255) tAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgaga > 1:1225130‑M2/1‑68 (MQ=255) ggCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcggtgatcataaatgagccg < 2:254469‑M2/100‑35 (MQ=255) gcTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtag < 2:1680920‑M2/100‑38 (MQ=255) tGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagct < 2:127091‑M2/100‑40 (MQ=255) ggCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctg > 1:505118‑M2/1‑60 (MQ=255) ggCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctg > 2:1189146‑M2/1‑60 (MQ=255) cAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgcc < 1:972577‑M2/100‑43 (MQ=255) cAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgcc > 2:1815018‑M2/1‑58 (MQ=255) cAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgcc > 2:2120220‑M2/1‑58 (MQ=255) cAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgcc > 1:266089‑M2/1‑58 (MQ=255) cAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgcc > 1:222511‑M2/1‑58 (MQ=255) cAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgcc > 2:65654‑M2/1‑58 (MQ=255) tGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaat < 1:394360‑M2/100‑46 (MQ=255) tGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaat < 2:1195941‑M2/100‑46 (MQ=255) tGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaat < 1:2318667‑M2/100‑46 (MQ=255) gacgacGGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgaggatcataaatgagacgtagctgccaat > 2:2009437‑M2/1‑54 (MQ=255) gACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatc > 2:1019848‑M2/1‑54 (MQ=255) aCGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatca > 1:1755037‑M2/1‑53 (MQ=255) aCGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatca > 2:848635‑M2/1‑53 (MQ=255) aCGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatca > 2:283925‑M2/1‑53 (MQ=255) cGATTGCGCCGACGAATCCCGCAGCTACCAGTAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcat < 2:2214450‑M2/100‑49 (MQ=255) cGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCGAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatc > 2:2112299‑M2/1‑52 (MQ=255) cGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatca > 2:1414103‑M2/1‑52 (MQ=255) agtgcGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatat > 1:1046212‑M2/3‑50 (MQ=255) aTTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatat > 1:1475632‑M2/1‑50 (MQ=255) aTTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatat > 1:1523097‑M2/1‑50 (MQ=255) aTTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatat < 1:1897567‑M2/100‑51 (MQ=255) ttGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatata > 2:235023‑M2/1‑49 (MQ=255) gcCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacc > 1:798632‑M2/1‑45 (MQ=255) ccGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacct < 1:37984‑M2/100‑57 (MQ=255) gaggaATGCCCCATCTGCTAGCAGCCAGCTCGTATCAATGGC‑‑‑CATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAAGCa < 2:2274756/86‑1 (MQ=255) acgaATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgc > 1:2021777‑M2/1‑41 (MQ=255) cgaATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgcc < 2:1239327‑M2/100‑61 (MQ=255) cgaATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagaagtagctgccaatcatataaacatagc < 2:2073853‑M2/99‑60 (MQ=255) aTCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtg > 1:556648‑M2/1‑37 (MQ=255) aTCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtg < 1:30270‑M2/100‑64 (MQ=255) aTCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagatgccaatcatataaacctcgccgtg < 2:1181212‑M2/100‑64 (MQ=255) cccGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtggg < 1:1845649‑M2/100‑66 (MQ=255) cccGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtggg > 1:2187223‑M2/1‑35 (MQ=255) cccGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtggg < 2:779600‑M2/100‑66 (MQ=255) cccGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtggg > 2:86337‑M2/1‑35 (MQ=255) ccGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggc < 2:1386145‑M2/100‑67 (MQ=255) ccGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgg < 2:1096500‑M2/98‑65 (MQ=255) gCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagt > 2:2152520‑M2/1‑29 (MQ=255) cTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagtt < 2:976462‑M2/100‑73 (MQ=255) tACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttg < 2:1957688‑M2/100‑74 (MQ=255) tACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttg > 2:1909772‑M2/1‑27 (MQ=255) tACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttg > 2:1421726‑M2/1‑27 (MQ=255) ccAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttgat > 1:387429‑M2/1‑25 (MQ=255) ccAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttgat < 1:1934091‑M2/100‑76 (MQ=255) agcagcCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttgatca < 1:1867658‑M2/100‑78 (MQ=255) agccagccGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttgatcatgc > 1:54786‑M2/1‑20 (MQ=255) agccagccGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttgatcatgc < 1:1548586‑M2/100‑81 (MQ=255) ccagccGGTATCAATGCC‑‑‑CATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACTTCGCCCACGGCGAGGtttatatgattg < 1:545729/100‑11 (MQ=21) cagccGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttgatcatgccga < 2:1988542‑M2/100‑84 (MQ=255) cagccGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttgatcatgccga > 2:1798284‑M2/1‑17 (MQ=255) agccGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttgatcatgccgat < 1:209332‑M2/100‑85 (MQ=255) tCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttgatcatgccgataatgccgt > 1:617503‑M2/1‑8 (MQ=255) cAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttgatcatgccgataatgccgta > 1:8437‑M2/1‑7 (MQ=255) cAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttgatcatgccgataatgccgta < 1:1489811‑M2/100‑94 (MQ=255) cAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttgatcatgccgataatgccgta < 1:1169860‑M2/100‑94 (MQ=255) aTGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttgatcatgccgataatgccgtaaa < 2:551991‑M2/100‑96 (MQ=255) aTGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttgatcatgccgataatgccgtaaa < 1:2161662‑M2/100‑96 (MQ=255) tGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttgatcatgccgataatgccgtaaac > 1:1561397‑M2/1‑4 (MQ=255) | GGCGGTAAGCCACCCGTTCGATACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTA > NC_000913/3596112‑3596307 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |