| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4621981 | 65 (0.760) | 5 (0.060) | 5/166 | NT | 8.2% | coding (213/1332 nt) | yjjJ | putative protein kinase |
| ? | NC_000913 | = 4622003 | 52 (0.650) | coding (235/1332 nt) | yjjJ | putative protein kinase | |||||
| Rejected: Frequency below cutoff threshold. | |||||||||||
ATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGCC > NC_000913/4621886‑4622079 | aTTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAgg < 1:1214224/100‑1 (MQ=255) tCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGgcg < 2:973595/100‑1 (MQ=255) tCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGgcg < 1:1178703/100‑1 (MQ=255) gCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCa > 1:1765957/1‑100 (MQ=255) cTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCATTATCGCGGAAATGAGCGTATTCCCGCATGGCGGGTGGACGATACCGAAAAGGTGCAt < 2:1388687/100‑1 (MQ=255) tttGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCa < 1:1110332/98‑1 (MQ=255) tttGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATa < 2:1529024/100‑1 (MQ=255) tttGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATa > 1:803479/1‑100 (MQ=255) ttGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATaa > 2:1590923/1‑100 (MQ=255) tGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATaaa > 1:1729189/1‑100 (MQ=255) ttccgatctcGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAAt < 2:763778/91‑1 (MQ=255) ggTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAAt < 1:1986696/100‑1 (MQ=255) gTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAAtt > 2:17055/1‑100 (MQ=255) aaaGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCg > 2:415003/1‑100 (MQ=255) aGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGTGGGTGGACGATACCGGAAAGGCGCATAAATTCGcc > 1:1686686/1‑100 (MQ=255) aGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGcc < 2:2295436/100‑1 (MQ=255) aGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGcc < 1:525724/100‑1 (MQ=255) aGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGcc < 1:409608/100‑1 (MQ=255) aGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGcc > 1:2087660/1‑100 (MQ=255) gCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCg > 1:1061579/1‑100 (MQ=255) gCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCg < 2:2067257/100‑1 (MQ=255) gCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCg < 1:172114/100‑1 (MQ=255) gCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGGATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGGGCATAAATTCGc < 2:530515/98‑1 (MQ=255) cGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAAtagatcggaa > 1:763780/1‑91 (MQ=255) ggCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACAtc < 1:348407‑M2/100‑3 (MQ=255) cAACGCTATATGCACTGCTGCGTCCTTATTGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACAtccg > 1:23075‑M2/1‑96 (MQ=255) cAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACAtccg < 2:1158343‑M2/100‑5 (MQ=255) aaCGCGATACGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACAtccgg > 2:502180‑M2/1‑95 (MQ=255) aCGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAtgtcggcgaatttatgcgcctttccggt < 1:133693‑M1/100‑29 (MQ=255) aCGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACAtccggt < 1:1542588‑M2/100‑7 (MQ=255) aCGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACAtccggt > 1:95699‑M2/1‑94 (MQ=255) cgcgATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCCTAAATTCGCCGACATCCGGtt > 1:745788/1‑100 (MQ=255) gcgATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAtgtcggcgaatttatgcgcctttccggtat < 1:2178890‑M1/100‑31 (MQ=255) gcgATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTtg < 1:1524052/100‑1 (MQ=255) gATATGCACTGCTGCGTCCTTATCACGGAATTGAGCGTATTCCCGTCTGGCGGGTGGTCCGTTCCGGAAAGGCGCATAAATTCGCCGACCTCCCGTtgtg > 2:1665319/1‑100 (MQ=255) gATATGCACTGCGGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAtgtcggcgaatttatgcgcctttccggtatcg < 2:1822413‑M1/100‑33 (MQ=255) atatGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGc < 1:1868183/100‑1 (MQ=255) atatGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGc < 1:1642052/100‑1 (MQ=255) tatGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGGCTGGCGGGTGGACGATACCGGAtgtcggcgaatttatgcgcctttccggtatcgtc < 2:2377266‑M1/100‑35 (MQ=255) atGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAtgtcggcgaatttatgcgcctttccggtatcgtcc < 1:1428213‑M1/100‑36 (MQ=255) cACTGCTGCGTCCTTATCGCGGGATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGcc < 1:569166/100‑1 (MQ=255) aCTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCg < 2:1618093/100‑1 (MQ=255) ctgctgCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGc > 2:1805816/1‑100 (MQ=255) gctgtGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAg < 1:119917/100‑1 (MQ=255) gctgcGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAg > 1:1477973/1‑100 (MQ=255) ctgcGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAgg < 1:1869104/100‑1 (MQ=255) tgcGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAggg > 2:95780/1‑100 (MQ=255) gTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAg < 1:2238499/100‑1 (MQ=255) ccTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGtt > 2:1086798/1‑100 (MQ=255) aTCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCt < 1:1147460/100‑1 (MQ=255) cgcgGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTg < 2:336181/99‑1 (MQ=255) ggAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTaa > 1:1439619/1‑100 (MQ=255) gAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAAc < 2:833588/100‑1 (MQ=255) gAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAAc < 2:883603/100‑1 (MQ=255) aGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGgcgc > 2:830131/1‑100 (MQ=255) gCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCa < 1:1158349/100‑1 (MQ=255) gCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCa < 1:1462242/100‑1 (MQ=255) gTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGa > 1:1527956/1‑100 (MQ=255) gTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGa < 2:2286661/100‑1 (MQ=255) cccGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGcg > 1:1179034/1‑100 (MQ=255) ccGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGcga > 1:567488/1‑100 (MQ=255) ccGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGcga < 2:1913163/100‑1 (MQ=255) cGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGcgac < 1:1504273/100‑1 (MQ=255) gtatGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGcgacg < 2:1516371/97‑1 (MQ=255) gTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGcgacg < 1:1805831/100‑1 (MQ=255) tCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGcgacga > 1:581018/1‑100 (MQ=255) cTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGaa > 1:970336/1‑100 (MQ=255) tGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAAc < 2:2175969/100‑1 (MQ=255) tGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAAc > 1:1729429/1‑100 (MQ=255) cGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGt > 1:431009/1‑100 (MQ=255) gtgTGGACGATACCGTAAAGGCGCATATAGTCGCCGACATCCGGTTGTGATGTCCGCAGGGGAGTTGTCGGGTAACAGACGCAGATGGcgacg < 2:116633/91‑1 (MQ=255) gggTGGACGATACCGGAAAGGCGCATTAATTCGCCGACATCCGGTTGTGCTTGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAAc < 2:821548/96‑1 (MQ=255) ggACGATACCGGAAAGGCGCATAAATTCGCCGACAtccggtatcgtccacccgccagacgggaatacgctcaattccgcgataaggacgcagcagtgcat < 1:1428213‑M2/100‑66 (MQ=255) gACGATACCGGAAAGGCGCATAAATTCGCCGACAtccggtatcgtccacccgccagccgggaatacgctcaattccgcgataaggacgcagcagtgcata < 2:2377266‑M2/100‑67 (MQ=255) gACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTg > 1:623668/1‑100 (MQ=255) gACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTg > 1:419962/1‑100 (MQ=255) cGATACCGGAAAGGCGCATAAATTCGCCGACAtccggtatcgtccacccgccagacgggaatacgctcaattccgcgataaggacgccgcagtgcatatc < 2:1822413‑M2/100‑69 (MQ=255) cGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGAt > 2:1906035/1‑100 (MQ=255) gATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATg < 2:373763/100‑1 (MQ=255) aTACCGGAAAGGCGCATAAATTCGCCGACAtccggtatcgtccacccgccagacgggaatacgctcaattccgcgataaggacgcagcagtgcatatcgc < 1:2178890‑M2/100‑71 (MQ=255) aCCGGAtgtcggcgaatttatgcgcctttccggtatcgtccacccgccagacgggaatacgctcaattccgcgataaggacgcagcagtgcatatcgcgt < 1:1542588‑M1/100‑95 (MQ=255) aCCGGAtgtcggcgaatttatgcgcctttccggtatcgtccacccgccagacgggaatacgctcaattccgcgataaggacgcagcagtgcatatcgcgt > 1:95699‑M1/1‑6 (MQ=255) aCCGGAAAGGCGCATAAATTCGCCGACAtccggtatcgtccacccgccagacgggaatacgctcaattccgcgataaggacgcagcagtgcatatcgcgt < 1:133693‑M2/100‑73 (MQ=255) aCCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGtt < 2:1092868/100‑1 (MQ=255) ccGGAtgtcggcgaatttatgcgcctttccggtatcgtccacccgccagacgggaatacgctcaattccgcgataaggacgcagcagtgcgtatcgcgtt > 2:502180‑M1/1‑5 (MQ=255) cGGAtgtcggcgaatttatgcgcctttccggtatcgtccacccgccagacgggaatacgctcaattccgcgataaggacgcagcagtgcatatcgcgttg < 2:1158343‑M1/100‑97 (MQ=255) cGGAtgtcggcgaatttatgcgcctttccggtatcgtccacccgccagacgggaatacgctcaattccgcaataaggacgcagcagtgcatatagcgttg > 1:23075‑M1/1‑4 (MQ=255) ggAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGc < 2:1729176/100‑1 (MQ=255) ggAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGc < 1:900519/100‑1 (MQ=255) gAtgtcggcgaatttatgcgcctttccggtatcgtccacccgccagacgggaatacgctcaattccgcgataaggacgcagcagtgcatatcgcgttgcc < 1:348407‑M1/100‑99 (MQ=255) | ATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGCC > NC_000913/4621886‑4622079 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |