| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4637531 | 81 (0.940) | 10 (0.130) | 7/162 | NT | 12.5% | coding (836/1425 nt) | creC | sensory histidine kinase in two‑component regulatory system with CreB or PhoB |
| ? | NC_000913 | = 4637546 | 66 (0.850) | coding (851/1425 nt) | creC | sensory histidine kinase in two‑component regulatory system with CreB or PhoB | |||||
| Rejected: Frequency below cutoff threshold. | |||||||||||
Only 100 of 133 total aligned reads displayed.
TGCGCGTGAAGCTGGAAGGGAAAAACTATATTGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCAGGCATTGGTAGAAACGTTAC > NC_000913/4637432‑4637629 | tGCGCGTGAAGCTGGAAGGGAAAAACTATATTGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGA > 2:1391057‑M1/1‑100 (MQ=255) cgcgTGAAGCTGGCAGGGAAAAACTATATTGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGaaa > 2:1099315/1‑100 (MQ=255) cgcgTGAAGCTGGAAGGGAAAAACTATATTGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGaaa < 2:1600219/100‑1 (MQ=255) gcgTGAAGCTGGAAGGGAAAAACTATATTGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAAt < 2:693147/100‑1 (MQ=255) gcgTGAAGCTGGAAGGGAAAAACTATATTGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAAt > 1:586070/1‑100 (MQ=255) tGAAGCTGGAAGGGAAAAACTATATTGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAAtttt > 1:2107326/1‑100 (MQ=255) aaGCTGGAAGGGAAAAACTATATTGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCTGCGGAAAttttcc < 1:1619680/100‑3 (MQ=255) aaGCTGGAAGGGAAAAACTATATTGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTAc < 2:244211/100‑1 (MQ=255) ctcTGGAAGGGAAAAACTATATTGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTAcg < 2:1694787/98‑1 (MQ=255) gCTGGAAGGGAAAAACTATATTGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTAcgc > 2:2016557/1‑100 (MQ=255) cTGGAAGGGAAAAACTATATTGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAccttcgcgtaa > 1:678491‑M1/1‑89 (MQ=255) cTGGAAGGGAAAAACTATATTGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTAcgcg > 1:236062/1‑100 (MQ=255) tGGAAGGGAAAAACTATATTGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAccttcgcgtaaa > 2:2342911‑M1/1‑88 (MQ=255) tGGAAGGGAAAAACTATATTGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGa > 2:4837/1‑100 (MQ=255) ggAAGGGAAAAACTATATTGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGaa < 1:768968/100‑1 (MQ=255) ggAAGGGAAAAACTATATTGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGaa > 1:584401/1‑100 (MQ=255) ggAAGGGAAAAACTATATTGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGaa > 1:2183395/1‑100 (MQ=255) ggAAGGGAAAAACTATATTGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGaa > 1:2061128/1‑100 (MQ=255) aaGGGAAAAACTATATTGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAgg < 1:1365976/100‑1 (MQ=255) aaGGGAAAAACTATATTGAGCAGTAGGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAgg < 2:889855/100‑1 (MQ=255) aGGGAAAAACTATATTGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGt > 1:2249623‑M2/1‑99 (MQ=255) gggAAAAACTATATTGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGtc > 1:536773‑M2/1‑98 (MQ=255) gAAAAACTATATTGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTTGAGCGGCGGAAATTTTACGCGAAGGtccg < 2:1943621‑M2/100‑5 (MQ=255) gAAAAACTAGATTGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGtccg < 1:848050‑M2/100‑5 (MQ=255) aaaaCTATATTGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAccttcgcgtaaaatttccgcc < 1:2342932‑M1/100‑22 (MQ=255) aaaCTATATTGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGtccgccg > 1:1314893‑M2/1‑93 (MQ=255) aaCTATATTGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAccttcgcgtaaaatttccgccgc < 1:1451974‑M1/100‑24 (MQ=255) ttctaccaatgcctgcatacgcgcattttgcgtcagaatgttgtcagtaaaacgagccaccacttccgGCGGCGGAAATTTTACGCGAAggtccgccctc > 1:1953034‑M1/69‑97 (MQ=255) ttctaccaatgcctgcatacgcgcattttgcgtcagaatgttgtcagtaaaacgagccaccacttccgGCGGCGGAAATTTTACGCGAAGGTccgccgcc > 1:1172701‑M1/69‑100 (MQ=255) ttctaccaatgcctgcatacgcgcattttgcgtcagaatgttgtcagtaaaacgagccaccacttccgGCGGCGGAAATTTTACGCGAAGGTccgccgcc > 1:1138826‑M1/69‑100 (MQ=255) aCTATATTGCGCAGTATGTTTACGCATTAACGCATAAGCTAAAAAGCACACTGGCGGCGATTCGTGGAGCGGCGGAACTTTTAAGCGAAGGAccgccgcc > 2:1152659/1‑100 (MQ=255) aCTATATTGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAccttcgcgtaaaatttccgccgct < 1:2002657‑M1/100‑25 (MQ=255) aCTATATTGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAccttcgcgtaaaatttccgccgct < 2:396595‑M1/100‑25 (MQ=255) aCTATATTGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTccgccgcc < 1:275045/100‑1 (MQ=255) cTATATTGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAccttcgcgtaaaatttccgccgctc < 1:1412936‑M1/100‑26 (MQ=255) cTATATTGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAccttcgcgtaaaatttccgccgctc < 2:988323‑M1/100‑26 (MQ=255) taccaatgcctgcatacgcgcattttgcgtcagaatgttgtcagtaaaacgagccaccacttccgGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGa > 1:2176002‑M1/66‑100 (MQ=255) atTGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAccttcgcgtaaaatttccgccgctccacg < 1:1126993‑M1/100‑30 (MQ=255) atTGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAg < 1:1415527/100‑1 (MQ=255) gAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAgtgg > 1:778766/1‑100 (MQ=255) aGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAgtggt < 2:1690596/100‑1 (MQ=255) gCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAgtggtg > 1:1740428/1‑100 (MQ=255) aGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGc < 2:1931167/100‑1 (MQ=255) aTGTTTACGCATTAACTCATGATCTAAGAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGtggtgg < 2:1175747/96‑1 (MQ=255) aTGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCg < 2:57125/100‑1 (MQ=255) ttACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGtttt > 1:1916234/1‑100 (MQ=255) cGCATTAACTCATGGGGTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGGAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACt < 2:1397351/100‑1 (MQ=255) cGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACt < 1:1016778/100‑1 (MQ=255) cGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACt < 1:1427527/100‑1 (MQ=255) cATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGa > 2:1491445/1‑100 (MQ=255) cATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGa > 1:1977799/1‑100 (MQ=255) cATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGa > 2:473444/1‑100 (MQ=255) cATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTCGAGCGGCGGAAATTTTTTGCGAATGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTg < 2:1058757/99‑1 (MQ=255) aTTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGac < 2:827429/100‑1 (MQ=255) cTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACAt > 2:1685741/1‑100 (MQ=255) cTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACAt > 1:634504/1‑100 (MQ=255) tCATGAGCTAAAAAGCCCGCTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTAc < 2:2041232/90‑1 (MQ=255) aTGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCt > 1:911823/1‑100 (MQ=255) aTGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCt > 1:545549/1‑100 (MQ=255) gAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGa > 1:983521/1‑100 (MQ=255) gAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGa < 1:1461841/100‑1 (MQ=255) gAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGa > 1:1531731/1‑100 (MQ=255) gAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGa < 1:1707609/100‑1 (MQ=255) aGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGTGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGAc > 2:2342068/1‑100 (MQ=255) gCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACg < 1:1003258/100‑1 (MQ=255) gCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACg < 1:2202689/100‑1 (MQ=255) gCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACg < 1:988323/100‑1 (MQ=255) aaaaaGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCaa > 1:324356/1‑100 (MQ=255) aaGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAAt < 1:691342/100‑1 (MQ=255) gCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATgc > 2:1730023/1‑100 (MQ=255) gCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATg > 2:1488194/1‑99 (MQ=255) ccACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATgcgc > 1:1092860/1‑100 (MQ=255) cACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGcgcg < 2:1092855/100‑1 (MQ=255) cTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAATATTCTGACGCAAAATGCGCGTa < 2:1382265/100‑1 (MQ=255) cTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTa < 1:2039590/100‑1 (MQ=255) cggcgATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCa > 2:330278/1‑100 (MQ=255) gcgATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCAgg < 2:2356360/100‑1 (MQ=255) gcgATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCAgg < 2:65553/100‑1 (MQ=255) gcgATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCAgg < 2:500634/100‑1 (MQ=255) gATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCAGGCa > 1:2067000/1‑100 (MQ=255) cGTGGGTCGGCGGAAGTTTTACGCGAAGGTCCGCCGCCGGAGGTGGTGGCGCGTTTTAGTGAGAACATTCTTGCGTACAATGCTCGTATGAAGGCAt > 2:2266669/1‑97 (MQ=255) cGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCAGGCATTgg < 2:324354/100‑1 (MQ=255) ggAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCAGGCATTGGTAg < 1:223589/100‑1 (MQ=255) gAGCGGCGGAAATTTTACGCGAAGGtccgccgctccacgaatcgccgccagtgggctttttagctcatgagttaatgcgtaaacatactgctcaatatag < 1:2202634‑M2/100‑76 (MQ=255) gAGCGGCGGAAATTTTACGCGAAGGtccgccgctccacgaatcgccgccagtgggctttttagctcatgagttaatgcgtaaacatactgctcaatatag < 1:1412936‑M2/100‑76 (MQ=255) aGCGGCGGAAATTTTACGCGAAGGtccgccgctccacgaatcgccgccagtgggctttttagctcatgagttaatgcgtaaacatactgctcaatatagt < 2:396595‑M2/100‑77 (MQ=255) gcggcgGAAATTTTACGCGAAGGtccgccgctccacgaatcgccgccagtgggctttttagctcatgagttaatgcgtaaacatactgctcaatatagtt < 1:1451974‑M2/100‑78 (MQ=255) cggcggAccttcgcgtaaaatttccgccgctccacgaatcgccgccagtgggctttttagctcatgagttaatgcgtaaacatactgctcaatatagttt > 1:1314893‑M1/1‑7 (MQ=255) ggcggAccttcccgtaaaatttccgccgatccacgaatcgccgccagtgggctttttagctcatgagttaatgcgtaaacatactgctcaatatagtttt < 2:1924333‑M1/100‑95 (MQ=255) ggcggAAATTTTACGCGAAGGtccgccgctccacgaatcgccgccagtgggctttttagctcatgagttaatgcgtaaacatactgctcaatatagtttt < 1:2342932‑M2/100‑80 (MQ=255) cggAccttcgcgtaaaatttccgccgctccacgaatcgccgccagtgggctttttagctcatgagttaatgcgtaaacatactgctcaatctagtttttc < 1:848050‑M1/100‑97 (MQ=255) cggAccttcgcgtaaaatttccgccgctccacgaatcgccgccagtgggctttttagctcatgagttaatgcgtaaacatactgctcaatatagtttttc > 2:443616‑M1/1‑4 (MQ=255) cggAccttcgcgtaaaatttccgccgctcaacgaatcgccgccagtgggctttttagctcatgagttaatgcgtaaacatactgctcaatatagtttttc < 2:1943621‑M1/100‑97 (MQ=255) GGAACTTTTACGCGAAGGTCCGACGCCGGAAGTGGTGGCTCGTTATACTGCCACCATTCTGACGCAAAATGCGCGTATGCAGGCATTGGTAGAACCGtt > 1:1298224‑M1/1‑99 (MQ=255) GGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCAGGCATTGGTAGAAACGTTa < 2:1045417‑M1/100‑1 (MQ=255) GGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCAGGCATTGGTAGAAACGTTa > 2:2066982‑M1/1‑100 (MQ=255) gAccttcgcgtaaaatttccgccgctccacgaatcgccgccagtgggctttttagctcatgagttaatgcgtaaacatactgctcaatatagtttttccc > 1:536773‑M1/1‑2 (MQ=255) gAccttcgcgtaaaatttccgccgctccacgaatcgccgccagtgggctttttaactcatgagttaatgcgtaaacatactgctcaatatagtttttccc < 2:250677‑M1/100‑99 (MQ=255) GAAATTTTACGCGAAGGTCCGCCGGCGGAAGTGGTGGCTCGTTTTACTGACAAGATTCTTACGCAAAATGCGCGTATGCAGGCATTGGTAGAAACGTTAc > 2:271169‑M1/1‑100 (MQ=255) GAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCAGGCATTGGTAGAAACGTTAc < 2:1792550‑M1/100‑1 (MQ=255) | TGCGCGTGAAGCTGGAAGGGAAAAACTATATTGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCAGGCATTGGTAGAAACGTTAC > NC_000913/4637432‑4637629 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |