| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2001919 = | NA (NA) | 4 (0.050) | 7/164 | NT | NA | intergenic (‑130/+191) | fliA/fliC | RNA polymerase, sigma 28 (sigma F) factor/flagellar filament structural protein (flagellin) |
| ? | NC_000913 | 2001936 = | NA (NA) | intergenic (‑147/+174) | fliA/fliC | RNA polymerase, sigma 28 (sigma F) factor/flagellar filament structural protein (flagellin) | |||||
Only 100 of 111 total aligned reads displayed.
GGCATGATTATCCGTTTCTGCAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGGGTTACAGGTAAATTCCAGGCAG‑AAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAAT > NC_000913/2001820‑2002015 | ggCATGATTATCCGTTTCTGCAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGGGTTACAGGTAAATTCCAGGCAG‑AAAAAAAc < 1:1657727/100‑1 (MQ=255)ggCATGATTATCCGTTTCTGCAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGGGTTACAGGTAAATTCCAGGCAG‑AAAAAAAc < 1:245378/100‑1 (MQ=255)ggCATGATTATCCGTTTCTGCAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGGGTTACAGGTAAATTCCAGGCAG‑AAAAAAAc < 1:1508291/100‑1 (MQ=255) gaattgcaatttattgaatttgcacatttttgtaggccggataaggcgtttacgccgcatccggcaacataaagcgcaatttgtcagcaacgtgcttccc > 1:1124766‑M1/98‑100 (MQ=255) gaattgcaatttattgaatttgcacatttttgtaggccggataaggcgtttacgccgcatccggcaacataaagcgcaatttgtcagcaacgtgcttccc < 2:1875117‑M1/3‑1 (MQ=255) aTGATTATCCGTTTCTGCAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGGGTTACAGGTAAATTCCAGGCAG‑AAAAAAAcccc < 2:1660459/100‑1 (MQ=255) aattgcaatttattgaatttgcacatttttgtaggccggataaggcgtttacgccgcatccggcaacataaagcgcaatttgtcagcaacgtgcttcccc < 2:862183‑M1/4‑1 (MQ=255) gtttATTCGTTTCTTCAAGGTTTTTAATCGGAAGATTAGTGCGTGAAAAGAGGCTTTATTTGGGGGTTACTGGTAAATTCAAGGAAG‑AAAAAAAc < 2:667802/93‑1 (MQ=255) attgcaatttattgaatttgcacatttttgtaggccggataaggcgtttacgccgcatccggcaacataaagcgcaatttgtcagcaacgtgcttCCccg > 1:996182‑M1/96‑100 (MQ=255) aTTATCCGTTTCTGCAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGGGTTACAGGTAAATTCCAGGCAG‑AAAAAAACCccgcc > 1:1289093/1‑100 (MQ=255) aTTATCCGTTTCTGCAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGGGTTACAGGTAAATTCCAGGCAG‑AAAAAAACCccgcc > 1:1736732/1‑100 (MQ=255) ttATCCGTTTCTGCAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGGGTTACAGGTAAATTCCAGGCAG‑AAAAAAACCccgccg > 1:1327310/1‑100 (MQ=255) tgcaatttattgaatttgcacatttttgtaggccggataaggcgtttacgccgcatccggcaacataaagcgcaatttgtcagcaacgtgcttCCccgcc > 1:2094449‑M1/94‑100 (MQ=255) tgcaatttattgaatttgcacatttttgtaggccggataaggcgtttacgccgcatccggcaacataaagcgcaatttgtcagcaacgtgcttCCccgcc > 1:423817‑M1/94‑100 (MQ=255) tATCCGTTTCTGCAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGGGTTACAGGTAAATTCCAGGCAG‑AAAAAAACCccgccac < 2:869740/100‑3 (MQ=255) tCCGTTTCTGCAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGGGTTACAGGTAAATTCCAGGCAG‑AAAAAAACCCCGCCGGTg > 2:303995/1‑100 (MQ=255) gcGTTTCTGCAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGGGTTACAGGTAAATTCATGGCAG‑AAAAAAACccggccggg > 2:2059119/2‑97 (MQ=255) cGTTTCTGCAGGGTTTTTAATCGGACGATTAGTTGGTGAAATGAGGGGTTATTTGGGGGTTACAGGTAAATTCCAGCCAG‑AAAAAAACCCCGCCGGTGGc < 2:220329/100‑1 (MQ=255) gTTTCTGGAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGGGTTACAGGTAAATTCCAGGCAG‑AAAAAAACCCCGCCGGTGGCg < 2:1095657/100‑1 (MQ=255) ttgaatttgcacatttttgtaggccggataaggcgtttacgccgcatccggcaacataaagcgcaatttgtcagcaacgtgcttCCCCGCCGGTGGCggg > 1:1823718‑M1/85‑100 (MQ=255) cTGCAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGGGTTACAGGTAAATTCCAGGCAG‑AAAAAAACCCCGCCGGTGGCGGGGa > 2:499571/1‑100 (MQ=255) cAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGGGTTACAGGTAAATTCCAGGCAG‑AAAAAAACCCCGCCGTTGGCGGGGAAGc < 1:1563543/100‑1 (MQ=255) cAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGGGTTACAGGTAAATTCCAGGCAG‑AAAAAAACCCCGCCGGTGGCGGGGAAGc < 1:944610/100‑1 (MQ=255) cAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGGGTTACAGGTAAATTCCAGGCAG‑AAAAAAACCCCGCCGGTGGCGGGGAAGc > 2:1231823/1‑100 (MQ=255) cAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGGGTTACAGGTAAATTCCAGGCAG‑AAAAAAACCCCGCCGGTGGCGGGGAAGc > 1:1561712/1‑100 (MQ=255) aGGGTTTTTAATCGGTCGATTAGTGGGTGAAATGAGAGGTTATTTGGGGATTACAGGTAAATTCCAGGCAG‑AAAAAAACCCCGCCGGTGGCGGGGAAg < 2:2069619/98‑1 (MQ=255) aGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGGGTTACAGGTAAATTCCAGGCAG‑AAAAAAACCCCGCCGGTGGCGGGGAAGCa > 1:661940/1‑100 (MQ=255) gggTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGGGTTACAGGTAAATTCCAGGCAG‑AAAAAAACCCCGCCGGTGGCGGGGAAGCAc > 1:2041021/1‑100 (MQ=255) ggTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGGGTTACAGGTAAATTCCAGGCAG‑AAAAAAACCCCGCCGGTGGCGGGTAAGCACg < 1:1248939/100‑1 (MQ=255) tttttAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGGGTTACAGGTAAATTCCAGGCAG‑AAAAAAACCCCGCCGGTGGCGGGGAAGCACGtt > 2:247302/1‑100 (MQ=255) tAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGGGTTACAGGTAAATTCCAGGCAG‑AAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTg > 1:223017/1‑100 (MQ=255) aaTCGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGGGTTACAGGTAAATTCCAGGCAG‑AAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGa > 1:1202381/1‑100 (MQ=255) aTCGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGGGTTACAGGTAAATTCCAGGCAG‑AAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGAc < 1:1655238/100‑1 (MQ=255) aTCGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGGGTTACAGGTAAATTCCAGGCAG‑AAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGAc > 1:805102/1‑100 (MQ=255) tCGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGGGTTACAGGTAAATTCCAGGCAG‑AAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACa < 1:488976/100‑1 (MQ=255) tCGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGGGTTACAGGTAAATTCCAGGCAG‑AAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACa > 1:2251654/1‑100 (MQ=255) cGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGGGTTACAGGTAAATTCCAGGCAG‑AAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACaa > 1:777771/1‑100 (MQ=255) cGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGGGTTACAGGTAAATTCCAGGCAG‑AAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACaa > 1:712538/1‑100 (MQ=255) ggACGATTAGTGGGTGAAATGAGGGGTTATTTGGGGGTTACAGGTAAATTCCAGGCAG‑AAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACaaa > 1:1856972/1‑100 (MQ=255) gATTAGTGGGTGAAATGAGGGGTTATTTGGGGGTTACAGGTAAATTCCAGGCAG‑AAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTgc < 1:350827/100‑1 (MQ=255) aGTGGGTGAAATGAGGGGTTATTTGGGGGTTACAGGTAAATTCCAGGCAG‑AAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCtt > 1:1520022/1‑100 (MQ=255) aGTGGGTGAAATGAGGGGTTATTTGGGGGTTACAGGTAAATTCCAGGCAG‑AAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCtt > 2:180533/1‑100 (MQ=255) gTGGGTGAAATGAGGGGTTATTTGGGGGTTACAGGTAAATTCCAGGCAG‑AAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCttt > 1:874635/1‑100 (MQ=255) gggTGAAATGAGGGGTTATTTGGGGGTTACAGGTAAATTCCAGGCAG‑AAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTAt > 1:862185/1‑100 (MQ=255) gggTGAAATGAGGGGTTATTTGGGGGTTACAGGTAAATTCCAGGCAG‑AAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTAt > 1:1137883/1‑100 (MQ=255) ggTGAAATGAGGGGTTATTTGGGGGTTACAGGTAAATTCCAGGCAG‑AAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATg > 1:1795274/1‑100 (MQ=255) gTGAAATGAGGGGTTATTTGGGGGTTACAGGTAAATTCCAGGCAG‑AAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGt < 1:2308092/100‑1 (MQ=255) gTGAAATGAGGGGTTATTTGGGGGTTACAGGTAAATTCCAGGCAG‑AAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGt > 1:362441/1‑100 (MQ=255) gAAATGAGGGGTTATTTGGGGGTTACAGGTAAATTCCAGGCAG‑AAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTG > 2:1945832‑M1/1‑100 (MQ=255) aaTGAGGGGTTATTTGGGGGTTACAGGTAAATTCCAGGCAG‑AAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCC < 2:1903526‑M1/100‑1 (MQ=255) aTGAGGGGTTATTTGGGGGTTACAGGTAAATTCCAGGCAGAAAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGtc < 1:1613951‑M1/100‑3 (MQ=255) tGAGGGGTTATTTGGGGGTTACAGGTAAATTCCAGGCAG‑AAAAAAACCCCGCCGGTGGAGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGG > 2:1116138‑M1/1‑100 (MQ=255) aGGGGTTATTTGGGGGTTACAGGTAAATTCCAGGCAG‑AAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGAT > 1:982195‑M1/1‑100 (MQ=255) ggggTTATTTGGGGGTTACAGGTAAATTCCAGGCAG‑AAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATg > 1:1714336/1‑100 (MQ=255) gggTTATTTGGGGGTTACAGGTAAATTCCAGGCAG‑AAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATgc > 2:986457/1‑100 (MQ=255) gTTATTTGGGGGTTACAGGTAAATTCCAGGCAG‑AAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATgcgg > 2:338074/1‑100 (MQ=255) ttATTTGGGGGTTACAGGTAAATTCCAGGCAG‑AAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATgcggc < 1:499573/100‑1 (MQ=255) tATTTGGGGGTTCCAGGTAAATTCCAGGCAG‑AAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATgcggcg < 2:2143461/100‑1 (MQ=255) tATTTGGGGGTTACAGGTAAATTCCAGGCAG‑AAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATgcggcg < 1:1053420/100‑1 (MQ=255) tATTTGGGGGTTACAGGTAAATTCCAGGCAG‑AAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATaaggcg > 1:267689‑M1/1‑94 (MQ=255) tttGGGGGTTACAGGTAAATTCCAGGCAG‑AAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACCCATTGCGCTTTATGTTGCCGGATGCGGCGTa > 1:949131/1‑100 (MQ=255) ttGGGGGTTACAGGTAAATTCCAGGCAG‑AAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATaaggcgttt < 2:267687‑M1/100‑10 (MQ=255) ttGGGGGTTACAGGTAAATTCCAGGCAG‑AAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTa < 1:2077689/99‑1 (MQ=255) tGGGGGTTACAGGTAAATTCCAGGCAG‑AAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACCAATTGCGCTTTATGTTGCCGGATGCGGCGTaaa > 1:588220/1‑100 (MQ=255) tGGGGGTTACAGGTAAATTCCAGGCAG‑AAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTaaa > 1:659727/1‑100 (MQ=255) gggggTTACAGGTAAATTCCAGGCAG‑AAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAAc < 1:1889986/100‑1 (MQ=255) ttACAGGTAAATTCCAGGCAG‑AAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCtt < 1:2357392/100‑1 (MQ=255) ttACAGGTAAATTCCAGACAG‑AAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCtt < 2:1356332/100‑1 (MQ=255) tACAGGTAAATTCCAGGCAG‑AAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGAGGCGTAAACGCCtt > 1:433086/1‑99 (MQ=255) aGGTAAATTCCAGGCAG‑AAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTatcc < 2:1303717‑M2/100‑5 (MQ=255) ggTAAATTCCAGGCAG‑AAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTatccg < 1:2043301‑M2/100‑6 (MQ=255) gTAAATTCCAGGCAG‑AAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATaaggcgtttacgccgcatccgg < 1:276067‑M1/100‑23 (MQ=255) tAAATTCCAGGCAG‑AAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTatccggc > 2:1327303‑M2/1‑93 (MQ=255) tAAATTCCAGGCAG‑AAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTatccggc > 1:148319‑M2/1‑93 (MQ=255) tAAATTCCAGGCAG‑AAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTatccggc > 1:1945848‑M2/1‑93 (MQ=255) tAAATTCCAGGCAG‑AAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTatccggc > 1:817661‑M2/1‑93 (MQ=255) aaaTTCCAGGCAG‑AAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGcc < 1:1156896/100‑1 (MQ=255) aaTTCCAGGCAG‑AAAACAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCt < 1:410577/100‑1 (MQ=255) aTTCCAGGCAG‑AAAAAATCCCCGTCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTa < 1:946576/100‑1 (MQ=255) aTTCCAGGCAG‑AAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATaaggcgtttacgccgcatccggcaac < 1:1696692‑M1/100‑27 (MQ=255) tCCAGGCAG‑AAAAACACCCCGCCGGTGGCGGGGACGCACGTTGCTGACAAATTGCGGTATATGTTGCCGGATGCGGCGTACACGCCTTATCCGGCCTACa > 2:116927/1‑100 (MQ=37) gtcagcaacgtgcttCCCCGCCACCGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACaa < 1:1857335‑M1/85‑1 (MQ=255) cAGGCAG‑AAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACaaa > 2:132072/1‑100 (MQ=255) aGGCAG‑AAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACaaaa > 2:669389/1‑100 (MQ=255) gCAG‑AAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAAt > 1:1293287/1‑100 (MQ=255) gcaacgtgcttCCCCGCCACCGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAAt < 1:1052470‑M1/89‑1 (MQ=255) cAG‑AAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAAtg < 1:157292/100‑1 (MQ=255) cAG‑AAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAAtg > 1:2018608/1‑100 (MQ=255) cAG‑AAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAAtg < 2:684422/100‑1 (MQ=255) caacgtgcttCCCCGCCACCGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAAtg < 1:1869802‑M1/90‑1 (MQ=255) g‑AAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAAtgtg > 1:319145/1‑100 (MQ=255) g‑AAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAAtgtg < 1:303997/100‑1 (MQ=255) g‑AAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACAAAAAtgtg > 2:488799/1‑100 (MQ=255) aaaaaaaCCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAAtg < 2:954045/97‑1 (MQ=255) aaaaaaaCCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGc < 1:344624/100‑1 (MQ=255) tgcttCCCCGCCACCGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCaa < 1:506702‑M1/95‑1 (MQ=255) aaaaaCCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCaa < 1:1793948/100‑1 (MQ=255) gcttCCCCGCCACCGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCaaa < 1:2062375‑M1/96‑1 (MQ=255) cttCCCCGCCACCGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTgcaact < 2:357052‑M1/97‑3 (MQ=255) cttCCCCGCCACCGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAAt < 1:1997119‑M1/97‑1 (MQ=255) | GGCATGATTATCCGTTTCTGCAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGGGTTACAGGTAAATTCCAGGCAG‑AAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAAT > NC_000913/2001820‑2002015 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |