New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3428910 =16 (0.190)8 (0.100) 5/168 NT 34.6% intergenic (‑148/‑326) rrsD/yrdA 16S ribosomal RNA of rrnD operon/bacterial transferase hexapeptide domain protein
?NC_000913 = 4207974 NA (NA)intergenic (‑442/‑173) purH/rrsE IMP cyclohydrolase and phosphoribosylaminoimidazolecarboxamide formyltransferase/16S ribosomal RNA of rrnE operon

Only 100 of 121 total aligned reads displayed.

CTTCACACAAACAGCCGGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGA  >  NC_000913/4207886‑4208073
                                                                                        |                                                                                                   
cTTCACACAAACAGCCGGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTgcg                                                                                          >  1:2098154/1‑100 (MQ=31)
  tCACACAAACAGCCGGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCt                                                                                        >  1:974671/1‑100 (MQ=33)
  tCACACAAACAGCCGGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCt                                                                                        >  1:2186979/1‑100 (MQ=33)
   cacacaAACAGCCGGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTa                                                                                       >  1:217505/1‑100 (MQ=35)
   cacacaAACAGCCGGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTa                                                                                       >  2:764369/1‑100 (MQ=35)
     cacaAACAGCCGGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTaaa                                                                                     <  2:2027145/100‑1 (MQ=38)
       caAACAGCCGGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAgc                                                                                   >  1:2366068/1‑100 (MQ=40)
           cAGCCGGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGt                                                                               >  2:745196/1‑100 (MQ=255)
           cAGCCGGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGt                                                                               <  1:1911648/100‑1 (MQ=255)
           cAGCCGGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGt                                                                               >  2:1524977/1‑100 (MQ=255)
            ngCCGGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTc                                                                              >  2:921168/2‑100 (MQ=255)
             gCCGGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTc                                                                              <  2:51707/99‑1 (MQ=255)
             gCCGGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCg                                                                             <  1:1504762/100‑1 (MQ=255)
             gCCGGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCg                                                                             <  1:563902/100‑1 (MQ=255)
              ccGGTTGGGTTGAAGAGAAAAATCCTGAAATTCCGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGc                                                                            <  2:2074108/100‑1 (MQ=255)
               cggttcggttGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCa                                                                           >  2:296765/1‑100 (MQ=255)
               cggttcggttGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCa                                                                           <  1:479009/100‑1 (MQ=255)
                 gttcggttGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAAc                                                                         <  1:2193728/100‑1 (MQ=255)
                  ttcggttGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACt                                                                        <  1:2069213/100‑1 (MQ=255)
                    cggttGAAGAGAAAAAGCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTg                                                                       <  2:1822470/99‑1 (MQ=255)
                     ggttGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGct                                                                     >  1:1456823/1‑100 (MQ=255)
                     ggttGAAGAGAAAAATCCTGAAATTCAGGGATGACTCTGAAAGAGGAAAGCGTAATGTACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGct                                                                     >  2:1530175/1‑100 (MQ=255)
                      gttGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGctc                                                                    >  1:2166799/1‑100 (MQ=255)
                      gttGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGctc                                                                    >  1:2166875/1‑100 (MQ=255)
                       ttGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGctct                                                                   <  1:1807720/100‑1 (MQ=255)
                       ttGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGctct                                                                   <  1:1077216/100‑1 (MQ=255)
                       ttGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGctct                                                                   <  1:2189100/100‑1 (MQ=255)
                        tGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCtt                                                                  >  2:964924/1‑100 (MQ=255)
                         gAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCttt                                                                 <  2:2301399/100‑1 (MQ=255)
                          aaaaaaaaaaTCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTa                                                                <  2:773343/95‑1 (MQ=255)
                          aaGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGTGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCttt                                                                 <  2:1555351/99‑1 (MQ=255)
                           agagAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTaa                                                               <  1:792889/100‑1 (MQ=255)
                              gaAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACa                                                             >  2:12838/1‑99 (MQ=255)
                                aaaaTCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAAtt                                                          >  2:1759036/1‑100 (MQ=255)
                                 aaaTCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAAttt                                                         <  2:2348634/100‑1 (MQ=255)
                                 aaaTCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAAtt                                                          <  2:1342588/99‑1 (MQ=255)
                                   aTCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTAt                                                       >  2:204905/1‑100 (MQ=255)
                                    tCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATc                                                      <  1:2244927/100‑1 (MQ=255)
                                    tCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATc                                                      >  2:1697480/1‑100 (MQ=255)
                                    tCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATc                                                      >  2:2115655/1‑100 (MQ=255)
                                     ccTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCa                                                     <  2:30571/100‑1 (MQ=255)
                                     ccTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCa                                                     <  2:814216/100‑1 (MQ=255)
                                     ccTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCa                                                     <  2:1075446/100‑1 (MQ=255)
                                     ccTGAAATTCAGGGTTCACTCTGAAAGAGGAAAGCGTAATATACTCCACCTCGCGACAGTGCGCTAAAGCTCGTCGCAACTTCTCTTTAACAATTTATCa                                                     <  2:293138/100‑1 (MQ=14)
                                      cTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAg                                                    >  2:156566/1‑100 (MQ=255)
                                      cTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAg                                                    >  1:1707845/1‑100 (MQ=255)
                                      cTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAg                                                    <  1:222799/100‑1 (MQ=255)
                                      cTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAg                                                    >  1:1621102/1‑100 (MQ=255)
                                      cTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAg                                                    >  2:1342150/1‑100 (MQ=255)
                                      cTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAg                                                    >  1:430290/1‑100 (MQ=255)
                                      cTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGCCGCAACTGCTCTTTAACAATTTATCAg                                                    >  1:2056335/1‑100 (MQ=255)
                                       tGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGa                                                   >  1:272497/1‑100 (MQ=255)
                                       tGAAATCCAGGGTTGACTCTGAAAGAGTAAATCGTAATATACTCCACCTCCCGACAGTGCTCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCa                                                     <  2:1602851/98‑1 (MQ=14)
                                        gAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGAc                                                  <  2:609897/100‑1 (MQ=255)
                                           aTTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAAt                                               >  2:152321/1‑100 (MQ=255)
                                           aTTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAAt                                               >  2:2220744/1‑100 (MQ=255)
                                            ttCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATc                                              <  1:2325790/100‑1 (MQ=255)
                                               aGGGTTGACTCTGAACGCGGAAAGCGTAATATACGTTAACTCGCCACCGTGCGCTAAAGCGCGTCGCACCTGCTCTTTAACAATTTATCACACAATCtgt                                           >  2:376421/1‑100 (MQ=14)
                                               aGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCtgt                                           >  1:1018846/1‑100 (MQ=255)
                                                gggTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCtgtg                                          <  2:1119059/100‑1 (MQ=255)
                                                 ggTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCACAACTGCTCTTTAACAATTTATCAGACAATCtgtgt                                         >  1:156647/1‑100 (MQ=255)
                                                  gTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACACTCTATCAGACAATCcgtgtg                                        <  2:1770223/100‑1 (MQ=255)
                                                   ttGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTgg                                       >  2:312279/1‑100 (MQ=255)
                                                    tGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTggg                                      <  2:1757296/100‑1 (MQ=255)
                                                     gACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGc                                     <  1:1085447/100‑1 (MQ=255)
                                                      aCTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCa                                    <  2:1640837/100‑1 (MQ=255)
                                                       ctctGAAAGAGGAAAGCGTACTATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTCACCATTTATCAGCCACTCTGTCTGGGCa                                    >  2:2241139/1‑99 (MQ=14)
                                                       ctctGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCAc                                   >  2:53756/1‑100 (MQ=255)
                                                        tctGAAAGAGGAAAGCGTAATATACGTCAACTTGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACt                                  >  2:501075/1‑100 (MQ=255)
                                                        tctGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACt                                  >  1:277225/1‑100 (MQ=255)
                                                        tctGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACt                                  >  1:277237/1‑100 (MQ=255)
                                                        tctGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACt                                  <  1:116426/100‑1 (MQ=255)
                                                          tGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCg                                >  1:15395/1‑100 (MQ=255)
                                                            aaaGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGan                              <  2:2186960/100‑2 (MQ=255)
                                                            aaaGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGaa                              <  1:1554452/100‑1 (MQ=255)
                                                             aaGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAg                             <  1:1039082/100‑1 (MQ=255)
                                                              agagGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGa                            >  1:759537/1‑100 (MQ=255)
                                                               nagGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGAt                           >  1:2296142/2‑100 (MQ=255)
                                                                      gCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGAtt                    >  1:2145026/1‑100 (MQ=255)
                                                                        gTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCt                  >  2:842838/1‑100 (MQ=255)
                                                                        gTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCt                  >  1:758472/1‑100 (MQ=255)
                                                                        gTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCt                  >  2:2225245/1‑100 (MQ=255)
                                                                        gTAAGATACGCCACCTCGAGACAGTGCGCTAAAGCGCGTCGCAACTGCCCTTTAACAATTTATCATACAATCTGTGTGGGCACTCGAAGATACGGATTCt                  <  2:754640/100‑1 (MQ=14)
                                                                         tAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCtt                 >  1:770471/1‑100 (MQ=255)
                                                                          aaTATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTa                >  1:57920/1‑100 (MQ=255)
                                                                           atatACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTaa               <  1:1513603/100‑1 (MQ=255)
                                                                            tataCGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAAc              <  1:1963337/100‑1 (MQ=255)
                                                                            tataCGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAAc              <  1:515187/100‑1 (MQ=255)
                                                                              taCGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGt            >  1:1784390/1‑100 (MQ=255)
                                                                                cGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCg          >  2:2041315/1‑100 (MQ=255)
                                                                                cGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCg          >  2:1945447/1‑100 (MQ=255)
                                                                                 gCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGc         <  1:312281/100‑1 (MQ=255)
                                                                                 gCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGc         <  2:324093/100‑1 (MQ=255)
                                                                                  ccACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCa        <  1:1242579/100‑1 (MQ=255)
                                                                                  ccACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCa        >  2:2312128/1‑100 (MQ=255)
                                                                                    aCCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAg      >  2:393868/1‑100 (MQ=255)
                                                                                    aCCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAg      <  1:876013/100‑1 (MQ=255)
                                                                                     ccTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGa     >  1:1531583/1‑100 (MQ=255)
                                                                                       tCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACg   <  2:700609/100‑1 (MQ=255)
                                                                                        cgcgACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGa  >  1:1518807/1‑100 (MQ=255)
                                                                                        |                                                                                                   
CTTCACACAAACAGCCGGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGA  >  NC_000913/4207886‑4208073

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.