New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3898629 =	NA (NA)	9 (0.120)	6/162	NT	NA	intergenic (+20/+42)	cbrC/yieK	UPF0167 family protein/putative 6‑phosphogluconolactonase
	?	NC_000913	3898659 =	NA (NA)					intergenic (+50/+12)	cbrC/yieK	UPF0167 family protein/putative 6‑phosphogluconolactonase

TCCGCTGTCTCCACTGCGGCAAGCTGAGACTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAAC  >  NC_000913/3898560‑3898754                                                                                                    |                                                                                                tCCGCTGTCTCCACTGCGGCAAGCTGAGACTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCtt                                                                                                 >  1:421066/1‑100 (MQ=255)  cttcgctgatggtaatcgctgataaagccgctgccgcagaattagcactcggttaagcttaagaaataAGGCCGGAGCGTAATTCACACATCCGGCCTTa                                                                                                >  2:1011185‑M1/69‑100 (MQ=255)    tcgctgatggtaatcgctgataaagccgctgccgcagaattagcactcggttaagcttaagaaataAGGCCGGAGCGTAATTCACACATCCGGCCTTAtt                                                                                              >  1:2122219‑M1/67‑100 (MQ=255)       gTCTCCACTGCGGCAAGCTGAGACGGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGTAGCGTAATTCACACATCCGGCCTTATTTCt                                                                                           >  2:1845120/1‑100 (MQ=255)          tcCACTGCGGCAAGCTGAGACTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTaa                                                                                        <  1:2381164/100‑1 (MQ=255)          tcCACTGCGGCAAGCTGAGACTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTaa                                                                                        >  1:1967467/1‑100 (MQ=255)           ccACTGCGGCAAGCTGAGACTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAg                                                                                       <  1:884485/100‑1 (MQ=255)            cACTGCGGCAAGCTGAGACTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGc                                                                                      <  1:531444/100‑1 (MQ=255)              cTGCGGCAAGCTGAGACTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCtt                                                                                    <  2:2280024/100‑1 (MQ=255)                  ggCAAGCTGAGACTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAAcc                                                                                <  2:1148039/100‑1 (MQ=255)                   gCAAGCTGAGACTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCg                                                                               >  1:1981463/1‑100 (MQ=255)                      aGCTGAGACTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGt                                                                            >  1:1878559/1‑100 (MQ=255)                        cTGATACAGTGGGGTGATTTCTCGTAGTTCTTTAAATAATGAGAAGAGGCCGGAGCGTAATTCTCACATCGGGCCTTATTTCTGAAGCTTAACCGAGTGc                                                                          >  2:1687084/1‑100 (MQ=255)                         tGAGACTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTACt                                                                         >  2:1585522/1‑100 (MQ=255)                          gtgaCCGTGGTGTGGTTTTTGGTATTTTTTTTTATCATGGTAACAGGCCTGATCCTAATTCACTCTTCCCTCCTTATTTCTTAAGCTTAACCg                                                                               <  2:2010607/91‑1 (MQ=255)                              cTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTc                                                                    <  1:2174018/100‑1 (MQ=255)                                gtgGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTg                                                                  >  1:2294903/1‑100 (MQ=255)                                gtgGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTg                                                                  >  2:1201316/1‑100 (MQ=255)                                 tgGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGc                                                                 <  1:1950045/100‑1 (MQ=255)                                 tgGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGc                                                                 <  2:851007/100‑1 (MQ=255)                                  ggggAGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCg                                                                <  2:2122620/100‑1 (MQ=255)                                   gggTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCgg                                                               >  2:1640465/1‑100 (MQ=255)                                   gggTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCgg                                                               <  2:1933360/100‑1 (MQ=255)                                    ggTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGc                                                              >  2:1123423/1‑100 (MQ=255)                                     gTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCa                                                             >  2:2368206/1‑100 (MQ=255)                                         tttttCGTAGTTAGTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCgg                                                         >  1:1603229/1‑100 (MQ=255)                                           tttCGTAGTTATTTAAATAATGAGAACAGTCCTGAGCGTAATTCATACATACGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGc                                                           >  2:1536239/1‑96 (MQ=255)                                            ttCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCtt                                                      <  2:960413/100‑1 (MQ=255)                                              cGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTa                                                    <  1:536111/100‑1 (MQ=255)                                              cGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTa                                                    >  2:2143109/1‑100 (MQ=255)                                              cGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTa                                                    >  2:874041/1‑100 (MQ=255)                                              cGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAAACGAGTGCTAATTCCTCGGCaaccgccttt                                                    >  2:2382416/1‑91 (MQ=255)                                               gTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCTTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTa                                                    <  2:131009/99‑1 (MQ=255)                                               gTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTAt                                                   <  1:1253806/100‑1 (MQ=255)                                                tAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATc                                                  <  2:992206/100‑1 (MQ=255)                                                  gTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATc                                                  >  2:2384860/1‑98 (MQ=255)                                                  gTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAg                                                <  2:1912417/100‑1 (MQ=255)                                                   ttATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAg                                                <  2:2193170/99‑1 (MQ=255)                                                   ttATGTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGc                                               <  1:2363444/100‑1 (MQ=255)                                                     aTTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGa                                             <  2:421064/100‑1 (MQ=255)                                                     aTTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGa                                             >  2:808715/1‑100 (MQ=255)                                                      tttAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGAt                                            >  2:1582042/1‑100 (MQ=255)                                                        tAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTa                                          >  1:203171/1‑100 (MQ=255)                                                        tAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTa                                          >  1:1525373/1‑100 (MQ=255)                                                        tAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTa                                          >  2:1235353/1‑100 (MQ=255)                                                          aataatGAGAACAGGCCGGAGTGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTAcc                                        >  1:1747709/1‑100 (MQ=255)                                                          aataatGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTAcc                                        <  2:860426/100‑1 (MQ=255)                                                            taatGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCAt                                      >  1:1098879/1‑100 (MQ=255)                                                             aatGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATc                                     <  1:387884/100‑1 (MQ=255)                                                             aatGAGAACAGGCCGGAGCGTAATTCACACATCCGACCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATc                                     >  2:1137288/1‑100 (MQ=255)                                                              atGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCa                                    <  1:1493280/100‑1 (MQ=255)                                                               tGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAg                                   >  1:456134/1‑100 (MQ=255)                                                                 agaACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCg                                 >  1:1027278/1‑100 (MQ=255)                                                                 agaACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCg                                 <  1:2074308/100‑1 (MQ=255)                                                                  gaACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGa                                >  2:651623/1‑100 (MQ=255)                                                                  gaACAGGCCAGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGa                                <  2:102270/100‑1 (MQ=255)                                                                  aataaggccggatgtgtgaattacgctccggcctTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGa                                >  1:2122219‑M2/35‑100 (MQ=255)                                                                   aaCATGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGaa                               <  2:1875070/100‑1 (MQ=255)                                                                    taaggccggatgtgtgaattacgctccggcctTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAg                              >  2:1011185‑M2/33‑100 (MQ=255)                                                                     cAGGCCGGAGCGTAGTTCGCACAGCCGGCCTTATTTCTTAAGCGTAACCGAGTGCTAATTCTGCGACAGCGGCTTGATCAGCGATTACGATCAGCGAAg                              <  2:1038674/99‑1 (MQ=255)                                                                      aggccggatgtgtgaattacgctccggcctTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGa                            >  1:1513387‑M2/31‑100 (MQ=255)                                                                      AGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGa                            >  1:1188754‑M1/1‑100 (MQ=255)                                                                       ggccggatgtgtgaattacgctccggcctTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCCGCGGCTTTATCAGCGATTACCATCAGCGAAgg                             >  2:393785‑M2/30‑98 (MQ=255)                                                                       ggccggatgtgtgaattacgctccggcctTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAgg                             >  2:1750014‑M2/30‑98 (MQ=255)                                                                       ggccggatgtgtgaattacgctccggcctTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGAt                           >  2:753160‑M2/30‑100 (MQ=255)                                                                       ggccggatgtgtgaattacgctccggcctTATTTCTTAAGCTTAACCGAGTGCTAATTCTACGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGAt                           >  1:810507‑M2/30‑100 (MQ=255)                                                                        gccggatgtgtgaattacgctccggcctTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATg                          >  1:292807‑M2/29‑100 (MQ=255)                                                                           GGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCATAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAg                       <  2:1276909‑M1/100‑1 (MQ=255)                                                                            gatgtgtgaattacgctccggcctTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGc                      >  1:2387238‑M2/25‑100 (MQ=255)                                                                               cGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGc                   <  1:2282520/100‑1 (MQ=255)                                                                                gTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCa                  <  1:388858/100‑1 (MQ=255)                                                                                gTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCa                  <  2:328823/100‑1 (MQ=255)                                                                                gTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCa                  <  1:651625/100‑1 (MQ=255)                                                                                gTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCa                  <  2:2268419/100‑1 (MQ=255)                                                                                  aaTTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAac                >  1:845547/1‑100 (MQ=255)                                                                                   aTTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAaca               <  2:1751669/100‑1 (MQ=255)                                                                                    ttCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAacac              <  1:1714832/100‑1 (MQ=255)                                                                                      cacacaTCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACgg            >  2:148718/1‑100 (MQ=255)                                                                                          gtagcggcctTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGCAGGATGCAGCTGCAACACGGAAGc        >  1:1337316‑M2/11‑100 (MQ=255)                                                                                          caTCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGc        >  2:369702/1‑100 (MQ=255)                                                                                           aTCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCt       >  2:1704310/1‑100 (MQ=255)                                                                                             ccggcctTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTgg     >  1:1022497‑M2/8‑100 (MQ=255)                                                                                              cggcctTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGa    <  2:1192494‑M2/94‑1 (MQ=255)                                                                                              cggcctTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGa    <  1:122098‑M2/94‑1 (MQ=255)                                                                                              cggcctTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGa    >  2:671623‑M2/7‑100 (MQ=255)                                                                                               ggcctTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGa    <  2:195967‑M2/94‑1 (MQ=255)                                                                                               ggcctTATTTCTTAAGCTTAACCGAGTGCTAATTCCGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGaa   >  1:346129‑M2/6‑100 (MQ=255)                                                                                                gcctTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAAc  <  2:1147349‑M2/96‑1 (MQ=255)                                                                                                    |                                                                                                TCCGCTGTCTCCACTGCGGCAAGCTGAGACTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAAC  >  NC_000913/3898560‑3898754

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.