| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4210001 | NA (NA) | 29 (0.220) | 8/170 | NT | 16.7% | intergenic (+152/‑42) | gltV/rrlE | tRNA‑Glu/23S ribosomal RNA of rrnE operon |
| ? | NC_000913 | = 4210039 | 151 (1.110) | intergenic (+190/‑4) | gltV/rrlE | tRNA‑Glu/23S ribosomal RNA of rrnE operon | |||||
CGGGTGATGTTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGcaac‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4209903‑4210001‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAACCCGAAGATGTTTCTTACGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAG < NC_000913/4210039‑4209937 CGGGTGATGTTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGC < 2:2894922/100‑1CGGGTGATGTTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGC < 1:2523728/100‑1 GGGTGATGTTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAGACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCA < 2:2971404/100‑1 GGGTGATGTTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCA < 2:1219240/100‑1 GGGTGATGTTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCA < 1:2834490/100‑1 GGGTGATGTTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCA < 1:2022759/100‑1 GGGTGATGTTTGAGATATTTGCTCTGTAAAAATCTGGATCTAGCTGAAAATTGAAACACTGAACAACGGAAGTTGTTCGTGAGTCTCTCAAATTTTCGCA < 2:362784/100‑1 GGTGATGTTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGC < 2:1473098/98‑1 GTGATGTTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAAC > 2:2799190/1‑100 GTGATGTTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAAC > 1:2747248/1‑100 GTGATGTTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAAC < 1:1560020/100‑1 GTGATGTTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAAC < 2:1420750/100‑1 GTGATGTTTGAGATATTTGATCATTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAAAAACGAAAGTTGTCCGTGAGTGTCACAAATTTTCGCAAC > 2:2441570/1‑100 TCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGTTTCTTGCGAT > 1:1954787/1‑100 CTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGTTTCTTGCGATc < 2:2088163/100‑2 CTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACCCGAAGATGTTTCTTTCGATT < 1:2644090/100‑1 CTGGATCAAGCTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGTTTCTTGCGATCCATCATCGTG < 1:2080889/100‑1 CTGGATCAAGCTGAAAATTGAAACACTGAACAACGAGAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACCCGAAGATGTTTCTTTCGATTCATCATCGTG < 1:3590824/100‑1 TGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACCCGAAGATGTTTCTTACGATTCATCATCGTGT < 2:2177822/100‑1 GATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACCCGAAGATGTTTCTTACGATTCATCATCGTGTTG < 1:3729108/100‑1 ATCAAGCTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACCCGAAGATGTTTCTTGCGATCCATCATCGTGTTGC < 1:706567/100‑1 ATCAAGCTGAAAATTGAAACACTGAACAACGAGAGTTGTTCGTGAGTCTCTCAGATTTTCGCAACCCGAAGATGTTTCTTTCGATTCATCATCGTGTTGC < 2:2122193/100‑1 ATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACCCGAAGATGTTTCTTTCGATTCATCATCGTGTTGC < 1:1045544/100‑1 ATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACCCGAAGATGTTTCTTTCGATTCATCATCGTGTTGC < 1:3402669/100‑1 TCAAGCTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACCCGAAGATGTTTCTTGCGATCCATCATCGTGTTGC < 1:2268159/99‑1 TCAAGCTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCACAACCCGAAGATGTTTCTTGCGATCCATCATCGTGTTGCG < 1:1655157/100‑1 TCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACCCGAAGATGTTTCTTTCGATTCATCATCGTGTTGCG < 1:1644849/100‑1 CAAGCTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACCCGAAGATGTTTCTTGCGATCCATCATCGTGTTGCG < 2:3647895/99‑1 CAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACCCGAAGATGTTTCTTACGATTCATCATCGTGTTGCGA < 2:2556539/100‑1 CAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGAAGATGTTTCTTACGATTCATCATCGTGTTGCGA < 1:568897/100‑1 AAGCTGAAAATTGAAACACTGAACAACGAGAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACCCGAAGATGTTTCTTTCGATTCATCATCGTGTTGCGAA < 2:2934543/100‑1 AGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACCCGAAGATGTTTCTTACGATTCATCATCGTGTTGCGAAA < 2:3756134/100‑1 AGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGAAGATGTTTCTTTCGATTCATCATCGTGTTGCGAAn < 2:3361379/100‑2 GCTGAAAGTTGAAACACTGAACAACGAGAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGAAGATGTTTTTTTCGATTCATCATCGTGTTGCGA < 2:603238/97‑1 GCTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCACAACCCGAAGATGTTTCTTGCGATCCATCATCGTGTTGCGAAA < 2:3683694/99‑1 TGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACCCGAAGATGTTTCTTACGATTCATCATCGTGTTGCGAAAATT < 1:403099/100‑1 AAAATTGAAACACTGAACAACGAAATTTGTTCGTGAGTCTCTCAAATTTTCGCAACCCGAAGATGTTTCTTACGATTCATCATCGTGTTGCGAAAATTTG < 1:3187586/100‑1 AAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACCCGAAGATGTTTCTTTCGATTCATCATCGTGTTGCGAAAATTTG < 2:198977/100‑1 AAATTGAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCACAACCCGAAGATGTTTCTTGCGATCCATCATCGTGTTGCGAAAATTTGA < 1:2015522/100‑1 AATTGAAACACTGAACAACGAGAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACCCGAAGATGTTTCTTTCGATTCATCATCGTGTTGCGAAAATTTGAG < 2:2870789/100‑1 AATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCACAACCCGAAGATGTTTCTTACGATTCATCATCGTGTTGCGAAAATTTGAG < 2:1639769/100‑1 ATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACCCGAAGATGTTTCTTACGATTCATCATCGTGTTGCGAAAATTTGAGA < 1:1535597/100‑1 CAACCCGAAGATGTTTCTTACGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATC > 2:1628518/1‑100 CAACCCGAAGATGTTTCTTACGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATC < 1:3200042/100‑1 AACCCGAAGATGTTTCTTACGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATC < 1:3362964/99‑1 ACCCGAAGATGTTTCTTACGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCA < 2:2755984/100‑1 ACCCGAAGATGTTTCTTACGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCA > 1:1010309/1‑100 ACCCGAAGATGTTTCTTACGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCA < 2:1309635/100‑1 ACCCGAAGATGTTTCTTACGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCA > 2:402731/1‑100 CCCGAAGATGTTTCTTACGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAG < 2:1953118/100‑1 CCCGAAGATGTTTCTTACGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCA > 1:2553695/1‑99 CGGGTGATGTTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGcaac‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4209903‑4210001‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAACCCGAAGATGTTTCTTACGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAG < NC_000913/4210039‑4209937 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |