BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4210001	NA (NA)	29 (0.220)	8/170	NT	16.7%	intergenic (+152/‑42)	gltV/rrlE	tRNA‑Glu/23S ribosomal RNA of rrnE operon
*	?	NC_000913	= 4210039	151 (1.110)	29 (0.220)	8/170	NT	16.7%	intergenic (+190/‑4)	gltV/rrlE	tRNA‑Glu/23S ribosomal RNA of rrnE operon

Only 100 of 220 total aligned reads displayed.

TTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACG  >  NC_000913/4209912‑4210100

 TTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACgatga                                                                                          >  2:1038960‑M2/1‑100 (MQ=255)

 TTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACgatga                                                                                          <  1:828539‑M2/100‑1 (MQ=255)

  ttAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACgatg                                                                                           <  1:1508710‑M2/96‑1 (MQ=255)

  TGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTTAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACgatgat                                                                                         <  1:2183535‑M2/100‑1 (MQ=255)

  TGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACgatgat                                                                                         >  1:1965623‑M2/1‑100 (MQ=255)

   GAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACatgatgatg                                                                                        <  1:2000341‑M2/100‑1 (MQ=255)

   GAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGatgatg                                                                                        <  1:907010‑M2/100‑1 (MQ=255)

   GAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGatgatg                                                                                        >  1:1933258‑M2/1‑100 (MQ=255)

    AGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGAtgatga                                                                                       >  1:3076237‑M2/1‑100 (MQ=255)

    AGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGAtgatga                                                                                       >  2:3615978‑M2/1‑100 (MQ=255)

     GATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGaa                                                                                      >  1:2140364‑M2/1‑100 (MQ=255)

      ATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAAt                                                                                     <  1:784764‑M2/100‑1 (MQ=255)

       TATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATc                                                                                    <  2:770101‑M2/100‑1 (MQ=255)

       TATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATc                                                                                    >  2:3761479‑M2/1‑100 (MQ=255)

       TATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATc                                                                                    <  1:390924‑M2/100‑1 (MQ=255)

        ATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGTAACACGATGATGAATCg                                                                                   >  1:2817798‑M2/1‑100 (MQ=255)

        ATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCg                                                                                   <  1:1062381‑M2/100‑1 (MQ=255)

        ATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCg                                                                                   <  2:3393342‑M2/100‑1 (MQ=255)

           tGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGATTCTCTCAAATTTTCGCAACACGATGATGAATCGTa                                                                                 >  2:794810/1‑99 (MQ=14)

           tGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTaa                                                                                <  2:475057/100‑1 (MQ=32)

              tctTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGaa                                                                             <  2:1448930/100‑1 (MQ=33)

               ctTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGaaa                                                                            >  2:1179053/1‑100 (MQ=32)

                tttAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAAc                                                                           <  1:466236/100‑1 (MQ=33)

                tttAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAAc                                                                           <  2:278934/100‑1 (MQ=33)

                tttAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAAc                                                                           <  2:2969994/100‑1 (MQ=33)

                tttAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAAc                                                                           >  1:2446181/1‑100 (MQ=33)

                 ttACAAATCTGGACCAAGCTGAAACTTGACACACTGAACAACGACAGTTGTTCGTGAGTCTCTCAACTTTTCGCAACACGATGATGAATCGTAAGAAAc                                                                           <  1:2675341/99‑1 (MQ=11)

                  tAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACAt                                                                         >  2:3148253/1‑100 (MQ=32)

                    aaaaTCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCt                                                                       >  2:302059/1‑100 (MQ=33)

                    aaaaTCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCt                                                                       >  1:1687442/1‑100 (MQ=33)

                      aaTCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTc                                                                     >  1:1799065/1‑100 (MQ=33)

                        tCTTGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCgg                                                                   <  1:3555357/100‑1 (MQ=17)

                         cTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGG                                                                  <  2:1953118‑M2/100‑1 (MQ=255)

                          tGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGT                                                                 >  1:1010309‑M2/1‑100 (MQ=255)

                          tGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGT                                                                 >  2:402731‑M2/1‑100 (MQ=255)

                            gATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTG                                                               <  1:3200042‑M2/100‑1 (MQ=255)

                             aTCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTtgt                                                              >  2:145374/1‑100 (MQ=33)

                              tCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTtgtg                                                             <  1:1371741/100‑1 (MQ=33)

                               cAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGa                                                            <  1:145374/100‑1 (MQ=33)

                               cAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGa                                                            <  1:595437/100‑1 (MQ=33)

                                aaGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAg                                                           >  2:2598959/1‑100 (MQ=32)

                                 aGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAgg                                                          <  1:1052111/100‑1 (MQ=33)

                                    tGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTa                                                       >  2:3582014/1‑100 (MQ=33)

                                     gAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTaa                                                      <  1:3094534/100‑1 (MQ=33)

                                      aaaaTTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAg                                                     <  1:775792/100‑1 (MQ=33)

                                       aaaTTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGACGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGc                                                    >  2:2566456/1‑100 (MQ=18)

                                        aaTTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCg                                                   <  2:2110479/100‑1 (MQ=33)

                                        aaTTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCg                                                   <  1:2596985/100‑1 (MQ=33)

                                          ttGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGAc                                                 <  1:2919257/100‑1 (MQ=32)

                                           tGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACt                                                <  2:650857/100‑1 (MQ=33)

                                            gAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTa                                               >  1:1647806/1‑100 (MQ=33)

                                               acacTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGc                                            <  2:3200017/100‑1 (MQ=33)

                                                cacTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCg                                           >  2:952285/1‑100 (MQ=33)

                                                cacTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCg                                           <  2:1908861/100‑1 (MQ=33)

                                                cacTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCg                                           >  2:1589652/1‑100 (MQ=33)

                                                  cTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTa                                         >  2:2746476/1‑100 (MQ=33)

                                                   tGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTac                                        >  2:1334496/1‑100 (MQ=33)

                                                   tGAACAACGAAAGGTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTac                                        <  2:2492485/100‑1 (MQ=17)

                                                    gAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTaca                                       >  1:3360375/1‑100 (MQ=32)

                                                    gAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTaca                                       >  2:2391142/1‑100 (MQ=33)

                                                    gAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTaca                                       >  1:1165556/1‑100 (MQ=33)

                                                        aacGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGt                                   >  1:107996/1‑100 (MQ=33)

                                                         acGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTATGAGGTTAAGCGACTAAGCGTACACGGTg                                  >  2:2302260/1‑100 (MQ=18)

                                                          cGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTgg                                 <  2:563058/100‑1 (MQ=32)

                                                          cGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTgg                                 >  1:1758116/1‑100 (MQ=33)

                                                           gAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGa                                >  1:2412489/1‑100 (MQ=33)

                                                             aaGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATg                              <  1:1879164/100‑1 (MQ=33)

                                                              aGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGc                             <  1:263592/100‑1 (MQ=33)

                                                                   ttCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTgg                        <  2:215834/100‑1 (MQ=33)

                                                                    tCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGc                       >  1:3440805/1‑100 (MQ=33)

                                                                     cGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTgg                        <  2:3362938/98‑1 (MQ=33)

                                                                     cGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCa                      >  2:1043816/1‑100 (MQ=33)

                                                                     cGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCa                      >  1:542887/1‑100 (MQ=33)

                                                                      gTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAg                     <  2:3555437/100‑1 (MQ=33)

                                                                      gTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAg                     <  2:1001249/100‑1 (MQ=33)

                                                                      gTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAg                     <  2:2182030/100‑1 (MQ=32)

                                                                       tGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGGTGTGAGGTTAAGCGACTAAGCGTACACGGTGTATGCCCTGGCAGt                    >  1:3389914/1‑100 (MQ=12)

                                                                         aGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAATCATCTTCGGGTTGTGAGGTTAAGCGACTGAGCGTACACGGTGGATGCCCTGGCAGTCa                  >  2:2090096/1‑100 (MQ=255)

                                                                         aGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCa                  <  2:989033/100‑1 (MQ=33)

                                                                            ctctcAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCagag               <  2:2898181/100‑1 (MQ=33)

                                                                             tctcAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGcgaaaatttgagagactcacgaacaactttcgttgttcagtgtttcaat              <  1:1535597‑M2/100‑50 (MQ=255)

                                                                              ctcAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGtgaaaatttgagagactcacgaacaactttcgttgttcagtgtttcaatt             <  2:1639769‑M2/100‑51 (MQ=255)

                                                                              ctcAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGc             >  2:2703664/1‑100 (MQ=33)

                                                                              ctcAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGc             >  1:3178712/1‑100 (MQ=33)

                                                                              ctcAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGAATAAGAGTACACGGTGGATGCCCTGGCAGTCAGAGGc             >  2:2269236/1‑100 (MQ=12)

                                                                               tcAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGtgaaaatttgagagactcacgaacaactttcattgttcagtgtttcaattt            <  1:2015522‑M2/100‑52 (MQ=255)

                                                                                cAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTGcgaaaatttgagagactcacgaacaactttcgttgttcagtgtttcaatttt           <  2:198977‑M2/100‑53 (MQ=255)

                                                                                 aaaTTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGAt          <  1:854775/100‑1 (MQ=32)

                                                                                   aTTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGa        <  2:106304/100‑1 (MQ=33)

                                                                                   aTTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGa        <  1:1334505/100‑1 (MQ=32)

                                                                                     tttCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGtgaaaatttgagagactcacgaacaactttcattgttcagtgtttcaattttcagc       <  2:3683694‑M2/99‑57 (MQ=255)

                                                                                     tttCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAg      <  2:1524828/100‑1 (MQ=33)

                                                                                      ttCGCAACACGATGATGAATCGTAAGAATCATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAgg     <  2:366266/100‑1 (MQ=17)

                                                                                       tCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGa    <  2:1264304/100‑1 (MQ=32)

                                                                                        cGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGAc   <  1:3602739/100‑1 (MQ=33)

                                                                                         gCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGcgaaaatttgagagactcacgaacaactttcattgttcagtgtttcaattttcagcttgat  <  1:706567‑M2/100‑62 (MQ=255)

                                                                                         gCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGcgaaaatttgagagactcacgaacaactttcattgttcagtgtttcaattttcagcttga   <  1:2268159‑M2/99‑61 (MQ=255)

                                                                                         gCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACg  >  1:2311600/1‑100 (MQ=33)

                                                                                         gCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTGcgaaaatttgagagactcacgaacaactttcgttgttcagtgtttcaattttcagcttgat  <  1:3402669‑M2/100‑62 (MQ=255)

                                                                                         gCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTGcgaaaatctgagagactcacgaacaactctcgttgttcagtgtttcaattttcagcttgat  <  2:2122193‑M2/100‑62 (MQ=255)

TTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACG  >  NC_000913/4209912‑4210100

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.