New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 900753 =NA (NA)11 (0.090) 8/164 NT NA noncoding (5/87 nt) REP83 (repetitive extragenic palindromic) element; contains 2 REP sequences REP83 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 900783 = NA (NA)noncoding (35/87 nt) REP83 (repetitive extragenic palindromic) element; contains 2 REP sequences REP83 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 148 total aligned reads displayed.

ATATGCAATAAACATGATTAAATAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAA  >  NC_000913/900654‑900851
                                                                                                   |                                                                                                  
cgaacggcgaaattaatgtggctgcgtacattcgccggggggttttgtaggtctgataagacgcgccagcgtcgcatcagacatcagcacggtgcctgtg                                                                                                    <  2:1605737‑M1/1‑1 (MQ=255)
cgaacggcgaaattaatgtggctgcgtacattcgccggggggttttgtaggtctgataagacgcgccagcgtcgcatcagacatcagcacggtgcctgtg                                                                                                    <  2:1050155‑M1/1‑1 (MQ=255)
 tatGCAATAAACATGATTAAATAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGc                                                                                                   <  1:804783/100‑1 (MQ=255)
  atGGAATAAACATGATTAAATAATTTAAATGAAATAAAAAAGACGGGCAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGcc                                                                                                  <  2:3113401/100‑1 (MQ=255)
  aacggcgaaattaatgtggctgcgtacattggccggggggttttgtaggtctgataagacgctccagcgtcgcatcagacatcagcacggtgcctgtGcc                                                                                                  >  2:2030836‑M1/98‑100 (MQ=255)
   tGCAATAAACATGATTAAATAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGTGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGcc                                                                                                  >  2:424291/1‑99 (MQ=255)
   tGCAATAAACATGATTAAATAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCg                                                                                                 >  2:2102072/1‑100 (MQ=255)
   tGCAATAAACATGATTAAATAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCg                                                                                                 <  1:3408269/100‑1 (MQ=255)
   tGCAATAAACATGATTAAATAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCg                                                                                                 >  2:3301697/1‑100 (MQ=255)
     ggcgaaattaatgtggctgcgtacattcgccggggggttttgtaggtctgataagacgcgccagcgtcgcatcagacatcagcacggtgcctgtGCCGGa                                                                                               >  2:1578845‑M1/95‑100 (MQ=255)
     ggcgaaattaatgtggctgcgtacattcgccggggggttttgtaggtctgataagacgcgccagcgtcgcatcagacatcagcacggtgcctgtGCCGGa                                                                                               >  2:2639520‑M1/95‑100 (MQ=255)
     ggcgaaattaatgtggctgcgtacattcgccggggggttttgtaggtctgataagacgcgccagcgtcgcatcagacatcagcacggtgcctgtGCCGGa                                                                                               <  1:1520271‑M1/6‑1 (MQ=255)
     ggcgaaattaatgtggctgcgtacattcgccggggggttttgtaggtctgataagacgcgccagcgtcgcatcagacatcagcacggtgcctgtGCCGGa                                                                                               >  1:2240236‑M1/95‑100 (MQ=255)
     gcgaaattaatgtggctgcgtacattcgccgggggggttttgtaggtctgataagacgcgccagcgtcgcatcagacatcagcacggtgcctgtGCCGGa                                                                                               >  2:1239341‑M1/95‑100 (MQ=255)
      aaTAAACATGATTAAATAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGAt                                                                                              >  1:871470/1‑100 (MQ=255)
      aaTAAACATGATTAAATAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGAt                                                                                              <  1:3412311/100‑1 (MQ=255)
       aTAAACATGATTAAATAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATa                                                                                             <  2:1048622/100‑1 (MQ=255)
        tAAACATGATTAAATAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATaa                                                                                            >  2:1420761/1‑100 (MQ=255)
        tAAACATGATTAAATAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATaa                                                                                            <  2:1288948/100‑1 (MQ=255)
          aaCATGATTAAATAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAgg                                                                                          <  1:2532879/100‑1 (MQ=255)
          aaCATGATTAAATAATTTAAATGAAATAAAAAAAACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAgg                                                                                          <  2:414949/100‑1 (MQ=255)
           aCATGATTCAATAATTTAAATTAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTGTTCATTATAAGAATTTATGCACTATGTAGTccttattagg                                                                                          <  2:3080130/99‑9 (MQ=255)
           aCATGATTAAATAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGc                                                                                         >  1:533278/1‑100 (MQ=255)
            cATGATTAAATAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCg                                                                                        <  2:1972978/100‑1 (MQ=255)
            cATGATTAAATAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCg                                                                                        <  2:1033845/100‑1 (MQ=255)
                aTTAAATAATTTAAATGAAATAAAAAAGACGGACTAAATAATGTGATTTCAGTATTAATTATAAGAATTTATGCACTATGTAGGCCGGATaggtgtc                                                                                       >  2:462864/1‑91 (MQ=255)
                aTTAAATAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTccc                                                                                    <  2:2826809/100‑1 (MQ=255)
                   aaaTAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGAGTTGTCCATCATCATTATAAGAATTTATGCACTATGTAGGCCGGATAATTCGTcc                                                                                     >  2:2931556/1‑96 (MQ=255)
                     ataatTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCTGGATAAGGCGTCCccgccg                                                                               <  2:232648/100‑1 (MQ=255)
                     ataatTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCccgccg                                                                               <  2:2015747/100‑1 (MQ=255)
                      taatTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCccgccg                                                                               <  1:1232166/99‑1 (MQ=255)
                         tttAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATc                                                                           <  2:375171/100‑1 (MQ=255)
                            aaaTGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCgg                                                                        <  1:794712/100‑1 (MQ=255)
                             attcgccggggggttttgtaggtctgataagacgcgccagcgtcgcatcagacatcagcacggtgcctgtGCCGGATAAGGCGTCCCCGCCGCATCCGGc                                                                       >  1:3241655‑M1/71‑100 (MQ=255)
                             attcgccggggggttttgtaggtctgataagacgcgccagcgtcgcatcagacatcagcacggtgcctgtGCCGGATAAGGCGTCCCCGCCGCATCCGGc                                                                       >  1:69380‑M1/71‑100 (MQ=255)
                             aaTGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTAGGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGc                                                                       <  1:1343314/100‑1 (MQ=255)
                              ttcgccggggggttttgtaggtctgataagccgcgccagcgtcgcatcagacatcagcacggtgcctgtGCCGGATAAGGCGTCCCCGCCGCATCCGGca                                                                      >  1:1714089‑M1/70‑100 (MQ=255)
                               tcgccggggggttttgtaggtctgataagacgcgccagcgtcgcatcagacatcagcacggtgcctgtGCCGGATAAGGCGTCCCCGCCGCATCCGGcac                                                                     >  2:478879‑M1/69‑100 (MQ=255)
                                 gccggggggttttgtaggtctgataagacgcgccagcgtcgcatcagacatcagcacggtgcctgtGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAg                                                                   >  1:1249281‑M1/67‑100 (MQ=255)
                                 aaaTAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAg                                                                   <  1:2900454/100‑1 (MQ=255)
                                   aTAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGc                                                                 >  2:536981/1‑100 (MQ=255)
                                    tAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCa                                                                >  1:2142602/1‑100 (MQ=255)
                                     aaaaaaGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCAc                                                               >  2:3417068/1‑100 (MQ=255)
                                      aaaaaGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCatc                                                              >  2:2308386/1‑98 (MQ=255)
                                      aaaaaGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCAcc                                                              >  1:3366822/1‑100 (MQ=255)
                                      aaaaaGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCAcc                                                              >  1:2502805/1‑100 (MQ=255)
                                      aaaaaGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCAcc                                                              >  2:1244034/1‑100 (MQ=255)
                                        aaaGACGAACCACTTAGTGGGTTGTCCGTCTCCATTATAAGAAGTTATGCACTATGTTGGCCGGATGTATCGCACCCTCTGCATCCGGCACAGGc                                                                 >  2:492894/1‑95 (MQ=255)
                                         aaGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTg                                                           <  1:1143866/100‑1 (MQ=255)
                                           gACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTGATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCt                                                         <  2:2684966/100‑1 (MQ=255)
                                             cGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGa                                                       <  1:2197659/100‑1 (MQ=255)
                                             cGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGa                                                       >  2:3758712/1‑100 (MQ=255)
                                             cGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCAGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGa                                                       >  1:3276931/1‑100 (MQ=255)
                                               gACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATg                                                     >  1:2898898/1‑100 (MQ=255)
                                                 ggtctgataagacgcgccagcgtcgcatcagacatcagcacggtgcctgtGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTc                                                   >  2:3518010‑M1/51‑100 (MQ=255)
                                                   aCTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTg                                                 >  2:2094951/1‑100 (MQ=255)
                                                   aCTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTg                                                 <  1:1452115/100‑1 (MQ=255)
                                                     ttAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGAt                                               >  2:1945246/1‑100 (MQ=255)
                                                      tAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATg                                              >  2:1701453/1‑100 (MQ=255)
                                                      tAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATg                                              <  2:1741153/100‑1 (MQ=255)
                                                        gTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCg                                            >  1:1117456/1‑100 (MQ=255)
                                                          gggTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGAc                                          >  1:292649/1‑100 (MQ=255)
                                                            gTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCAGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGc                                        >  2:2451659/1‑100 (MQ=255)
                                                                ttcGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCAGCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTgg                                     <  2:2495675/97‑1 (MQ=255)
                                                                tCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGgc                                    <  2:1859973/100‑1 (MQ=255)
                                                                  cGTCTTCATTATAAGAATTTATGCACGACGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGgcg                                   <  1:813114/99‑1 (MQ=255)
                                                                   gTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGcgcg                                 <  1:3792945/100‑1 (MQ=255)
                                                                   agcgtcgcatcagacatcagcacggtgcctgtGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGcgcg                                 >  1:3733395‑M1/33‑100 (MQ=255)
                                                                      ttCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTc                               <  1:2102769/99‑1 (MQ=255)
                                                                      ttCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCt                              <  1:1244043/100‑1 (MQ=255)
                                                                      ttCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCt                              >  2:2364030/1‑100 (MQ=255)
                                                                      ttCATTAGAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCt                              <  2:467420/100‑1 (MQ=255)
                                                                       tCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCtt                             >  1:102028/1‑100 (MQ=255)
                                                                       tCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCtt                             <  1:69484/100‑1 (MQ=255)
                                                                        cATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTa                            <  1:2242080/100‑1 (MQ=255)
                                                                         aTTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTAt                           <  1:3072246/100‑1 (MQ=255)
                                                                          ttATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATc                          <  2:1847276/100‑1 (MQ=255)
                                                                          ttATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATc                          <  1:1912292/100‑1 (MQ=255)
                                                                           tataAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCa                         <  1:538907/100‑1 (MQ=255)
                                                                            ataAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAg                        <  2:3615128/100‑1 (MQ=255)
                                                                             taAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCaaa                       <  1:3534817/100‑3 (MQ=255)
                                                                              aaGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATCCGACGCTGGCGCGTCTTATCAGAc                      >  1:755037/1‑100 (MQ=255)
                                                                                gAATATATGCACTATGTAGGCAGGATACGACGTCTCCGCCGCAGCCGGCGCAGCCACCCTGCTGATGGCTGATGCGATGCGGGCGCGACGTATCAGAc                      <  2:3572862/98‑1 (MQ=255)
                                                                                   tttATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACa                 <  2:2644722/100‑1 (MQ=255)
                                                                                   tttATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACa                 <  1:3104915/100‑1 (MQ=255)
                                                                                      aTGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACaaaa              >  1:2641522/1‑100 (MQ=255)
                                                                                      aTGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACaaaa              >  1:3596182/1‑100 (MQ=255)
                                                                                       tGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAAc             <  1:2279047/100‑1 (MQ=255)
                                                                                        gCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAAcc            >  1:1860720/1‑100 (MQ=255)
                                                                                        gCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCCGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAAc             <  1:927319/99‑1 (MQ=255)
                                                                                         cACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAAccc           >  1:3363253/1‑100 (MQ=255)
                                                                                         cACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAAccc           <  1:1295219/100‑1 (MQ=255)
                                                                                         cACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAAccc           >  2:2802108/1‑100 (MQ=255)
                                                                                          aCTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAAcccc          >  2:2554614/1‑100 (MQ=255)
                                                                                           cTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAAccccc         >  2:3142708/1‑100 (MQ=255)
                                                                                           cTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAAccccc         >  2:868462/1‑100 (MQ=255)
                                                                                            tATGTAGGCCGAATAAGGCGTCCGCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAAcccccc        <  2:2936956/100‑1 (MQ=255)
                                                                                              tGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACGAAACCCCCCgg      >  1:2650625/1‑100 (MQ=255)
                                                                                                 aGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGa   >  1:1183815/1‑100 (MQ=255)
                                                                                                  ggCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGaa  >  1:1827896/1‑100 (MQ=255)
                                                                                                   |                                                                                                  
ATATGCAATAAACATGATTAAATAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAA  >  NC_000913/900654‑900851

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.