New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 3235921113 (0.830)21 (0.170) 8/162 NT 16.6% intergenic (‑46/‑39) rlmG/ygjP 23S rRNA m(2)G1835 methyltransferase, SAM‑dependent/putative metal dependent hydrolase
?NC_000913 = 3235931 109 (0.880)intergenic (‑56/‑29) rlmG/ygjP 23S rRNA m(2)G1835 methyltransferase, SAM‑dependent/putative metal dependent hydrolase

Only 100 of 176 total aligned reads displayed.

CGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAATTTCGACATTGCCCCTGAAAAGGGTGCGTGAGTATACCCTTTTTCTCTTTTTCGTGGGCGGTTATGAGCAATCTTACTTATCTTCAGGGTTATCCCGAGCAGCTACTTTCCCAGGTGCGAACA  >  NC_000913/3235822‑3236019
                                                                                                   |                                                                                                  
cGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAATTTCGACATTGCCCCTGAAAAGGGT                                                                                                    <  1:2652615‑M1/100‑1 (MQ=255)
cGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAATTTCGACATTGCCCCTGAAAAGGGT                                                                                                    >  1:3468714‑M1/1‑100 (MQ=255)
   cGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAATTTCGACATTGCCCCTGAAAAGGGTGCg                                                                                                 >  1:2776165/1‑100 (MQ=255)
    ggAAAACGTTGTAGTGTCAGTGAACTGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAATTTCGACATTGCCCCTGAAAAGGGTGCGt                                                                                                <  1:3639563/100‑1 (MQ=255)
      aaaaCGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAATTTCGACATTGCCCCTGAAAAGGGTGCGTGa                                                                                              <  2:309992/100‑1 (MQ=255)
       aaaCGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAATTTCGACATTGCCCCTGAAAAGGGTGCGTGAg                                                                                             <  1:3371386/100‑1 (MQ=255)
        aaCGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCGCATCGGCCCTCCTGAATGATAAAATTTCGACATTGCCCCTGAAAAGGGTGCGTGAGt                                                                                            <  2:2972232/100‑1 (MQ=255)
          cGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAATTTCGACATTGCCCCTGAAAAGGGTGCGTGAGtat                                                                                          >  1:1858034/1‑100 (MQ=255)
             tGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGGGGCTCATCGGCCCGCCTGAATGATAAAATTTCGACATTGCCCCTGAAAAGGGTGCGTGAGTATacc                                                                                       >  1:1089791‑M2/1‑97 (MQ=255)
              gTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCTTCGGCCCTCCTGAATGATAAAATTTCGACATTGCCCCTGAAAAGGGTatactcacgcaccc                                                                                      <  2:2072705‑M1/100‑15 (MQ=255)
               tAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAATTTAGACATTGCCCCTGAAAAGGGTGCGTGAGTATaccct                                                                                     <  2:292275‑M2/100‑6 (MQ=255)
                 gtgtCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAATTTCGACATTGCCCCTCAAAAGGGTGCGTGAGTATacccttt                                                                                   <  2:1116043‑M2/100‑8 (MQ=255)
                   gtCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAATTTCGACATTGCCCCTGAAAAGGGTatactcacgcacccttttc                                                                                 <  1:794544‑M1/100‑20 (MQ=255)
                   gtCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAATTTCGACATTGCCCCTGAAAAGGGTGCGTGAGTATACCCttttt                                                                                 <  1:2989238/100‑1 (MQ=255)
                    tCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAATTTCGACATTGCCCCTGGAAAGGGTGCGTGAGTATACCCTTTTtc                                                                                <  1:1763699/100‑1 (MQ=255)
                    tCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAATTTCGACATTGCCCCTGAAAAGGGTGCGTGAGTATACCCTTTTtc                                                                                <  2:537023/100‑1 (MQ=255)
                    tCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAATTTCGACATTGCCCCTGAAAAGGGTGCGTGAGTATACCCTTTTtc                                                                                <  1:852566/100‑1 (MQ=255)
                    tCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAATTTCGACATTGCCCCTGAAAAGGGTGCGTGAGTATACCCTTTTtc                                                                                <  1:2468474/100‑1 (MQ=255)
                    tCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAATTTCGACATTGCCCCTGAAAAGGGTGCGTGAGTATACCCTTTTtc                                                                                <  1:3350366/100‑1 (MQ=255)
                     cAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCTTCCTGAATGATAAAATTTCGACATTGCCCCTGAAAAGGGTatactcacgcacccttttcag                                                                               <  2:448796‑M1/100‑22 (MQ=255)
                     cAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAATTTCGACATTGCCCCTGAAAAGGGTatactcacgcacccttttcag                                                                               <  1:2242707‑M1/100‑22 (MQ=255)
                     cAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAATTTCGACATTGCCCCTGAAAAGGGTatactcacgcacccttttcag                                                                               <  1:1360199‑M1/100‑22 (MQ=255)
                     cAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAATTTCGACATTGCCCCTGAAAAGGGTGCGTGAGTATACCCTTTTtct                                                                               <  1:259761/100‑1 (MQ=255)
                     cAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAATTTCGACATTGCCCCTGAAAAGGGTGCGTGAGTATACCCTTTTtct                                                                               <  1:464381/100‑1 (MQ=255)
                     cAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAATTTCGACATAGCCCCTGAAAAGGGAGCGTGAGTATACCCTATTtc                                                                                >  2:2250599/1‑99 (MQ=255)
                      aGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAATTTCGACATTGCCCCTGAAAAGGGTatactcacgcacccttttcagg                                                                              <  1:2312782‑M1/100‑23 (MQ=255)
                      aGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAATTTCGACATTGCCCCTGAAAAGGGTatactcacgcacccttttcagg                                                                              <  1:2946097‑M1/100‑23 (MQ=255)
                      aGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAATTTCGACATTGCCCCTGAAAAGGGTGCGTGAGTATACCCTTTTtctc                                                                              >  2:1281161/1‑100 (MQ=255)
                       gTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAATTTCGACATTGCCCCTGAAAAGGGTatactcacgcacccttttcaggg                                                                             <  2:2020192‑M1/100‑24 (MQ=255)
                       gTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAATTTCGACATTGCCCCTGAAAAGGGTatactcacgcacccttttcaggg                                                                             <  1:1039140‑M1/100‑24 (MQ=255)
                        tGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGCATGATCAACCTTCGACATTGCCCCTGAAAAGGGTatactcacgcacccttttcagggg                                                                            <  2:1270020‑M1/100‑25 (MQ=255)
                        tGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAATTTCGACATTGCCCCTGAAAAGGGTatactcacgcacccttttcagggg                                                                            <  1:807492‑M1/100‑25 (MQ=255)
                        tGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAATTTCGACATTGCCCCTGAAAAGGGTatactcacgcacccttttcagggg                                                                            <  1:3711210‑M1/100‑25 (MQ=255)
                        tGAACGGAAACCGTTGTCTAAGTGGCTCACCGGCCCTAATGAATGATAAAATTTCGCCCTTGCCCCTGAAAAGGGTatactcacgcacccttttcagggg                                                                            <  2:1270220‑M1/100‑25 (MQ=255)
                         gAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAATTTCGACATTGCCCCTGAAAAGGGTGCGTGAGTATACCCTTTTTCTCttt                                                                           >  2:1090152/1‑100 (MQ=255)
                           aCGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAATTTCGACATTGCCCCTGAAAAGGGTGCGTGAGTATACCCTTTTTCTCttttt                                                                         <  2:353892/100‑1 (MQ=255)
                           aCGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAATTTCGACATTGCCCCTGAAAAGGGTGCGTGAGTATACCCTTTTTCTCtttt                                                                          >  2:2206269/1‑99 (MQ=255)
                           aCGGAAACCGTTGTCTAAGTGGCTCATCCGCCCTCCTGAATGATAAAATTTCGACATTGCCCCTGACAAGGGTatactcacgcacccttttcaggg                                                                             <  2:3497570‑M1/96‑24 (MQ=255)
                            cGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAATTTCGACATTGCCCCTGAAAAGGGTGCGTGAGTATACCCTTTTTCTCTTTTTc                                                                        <  2:562912/100‑1 (MQ=255)
                             ggAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAATTTCGACATTGCCCCTGAAAAGGGTGCGTGAGTATACCCTTTTTCTCTTTTTCg                                                                       <  2:1860048/100‑1 (MQ=255)
                              gAAACCGTTGTCTAAGTGGCTCATCGGCTCTCCTGAATGATAAAATTGCGACATTGCCCCTGAAAAGGGTGCGTGAGTATACCCTTTTTCTCTTTTTCGt                                                                      <  1:1368192/100‑1 (MQ=255)
                              gAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAATTTCGACATTGCCCCTGAAAAGGGTGCGTGAGTATACCCTTTTTCTCTTTTTCGt                                                                      <  2:1221128/100‑1 (MQ=255)
                                    gTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAATTTCGACATTGCCCCTGAAAAGGGTGCGTGAGTATACCCTTTTTCTCTTTTTCGTGGGCgg                                                                <  1:466054/100‑1 (MQ=255)
                                      tGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAATTTCGACATTGCCCCTGAAAAGGGTGAGTGAGTATACCCTTTTTCTCTTTTTCGTGGGCGGtt                                                              >  2:1627541/1‑100 (MQ=255)
                                       gTCTAAGTGGCTTATCGGCCCTCTTGAATGATAAAATTTCGACATTGCCCCTGAAAAGGGTGCGTGAGTATACACTTTTTCTCTTTTTCGTGGGCGGTTa                                                             <  1:2675314/100‑1 (MQ=255)
                                         cTAAGTGGCTCATCGGCCCTCCTGAATGATAAAATTTCGACATTGCCCCTGAAAAGGGTGCGTGAGTATACCCTTTTTCTCTTTTTCGTGGGCGGTTATg                                                           <  2:2101235/100‑1 (MQ=255)
                                           aaGTGGCTCATCGGCCCTCCTGAATGATAAAATTTCGACATTGCCCCTGAAAAGGGTGCGTGAGTATACCCTTTTTCTCTTTTTCGTGGGCGGTTATGAg                                                         <  2:1665593/100‑1 (MQ=255)
                                           aaGTGGCTCATCGGCCCTCCTGAATGATAAAATTTCGACATTGCCCCTGAAAAGGGTGCGTGAGTATACCCTTTTTCTCTTTTTCGTGGGCGGTTATGAg                                                         >  1:1602203/1‑100 (MQ=255)
                                               ggatCATAGGCCCTCCTGCATGATAAAATTTCGACATAACACCTGAAAAGGGTGCGTGAGTATACGCTTTTTCTCTTTATCGGGGGCGGCTATGAGCagt                                                     >  2:313169/4‑98 (MQ=255)
                                                 cTCATCGGCCCTCCTGAATGATAAAATTTCGACATTGCCCCTGAAAAGGGTGCGTGAGTATACCCTTTTTCTCTTTTTCGTGGGCGGCTATGAGTAATct                                                   >  1:2174023/1‑100 (MQ=255)
                                                     tCGGCCCTCCTGAATGATAAAATTTCGACATTGCCCCTGAAAAGGGTGCGTGAGTATACCCTTTTTCTCTTTTTCGTGGGCGGTTATGAGCAATcttact                                               >  1:3040346/1‑100 (MQ=255)
                                                     tCGGCCCTCCTGAATGATAAAATTTCGACATTGCCCCTGAAAAGGGTGCGTGAGTATACCCTTTTTCTCTTTTTCGTGGGCGGTTATGAGCAATcttact                                               >  1:649149/1‑100 (MQ=255)
                                                     tCGGCCCTCCTGAATGATAAAATTTCGACAGTGCCCGTGAAAAGGGTGCGTGAGTATACCCTTTTTCTCTTTTTCGTGGGCGGTTATGAGCAATcttact                                               <  1:1161282/100‑1 (MQ=255)
                                                      cGGCCCTCCTGAATGATAAAATTTCGACATTGCCCCTGAAAAGGGTGCGTGAGTATACCCTTTTTCTCTTTTTCGTGGGCGGTTATGAGCAATcttactt                                              <  1:3503108/100‑1 (MQ=255)
                                                      cGGCCCTCCTGAATGATAAAATTTCGACATTGCCCCTGAAAAGGGTGCGTGAGTATACCCTTTTTCTCTTTTTCGTGGGCGGTTATGAGCAATcttactt                                              <  2:1014833/100‑1 (MQ=255)
                                                       ggCCCTCCTGAATGATAAAATTTCGACATTGCCCCTGAAAAGGGTGCGTGAGTATACCCTTTTTCTCTTTTTCGTGGGCGGTTATGAGCAATcttactta                                             >  2:1331170/1‑100 (MQ=255)
                                                        gCCCTCCTGAATGATAAAATTTCGACATTGCCCCTGAAAAGGGTGCGTGAGTATACCCTTTTTCTCTTTTTCGTGGGCGGTTATGAGCAATcttactta                                             <  2:3397676/99‑1 (MQ=255)
                                                        gCCCTCCTGAATGATAAAATTTCGACATTGCCCCTGAAAAGGGGGCGTGAGTATACCCTTTTTCTCTTTTTCGTGGGCGGTTATGAGCAATcttactta                                             <  2:655314/99‑1 (MQ=255)
                                                         cccTCCTGAATGATAAAATTTCGACATTGCCCCTGAAAAGGGTGCGTGAGTATACCCTTTTTCTCTTTTTCGAGGGCGGTTATGAGCAATCTTACTTATc                                           >  1:1930858/1‑100 (MQ=255)
                                                           ctcctGAATGATAAAATTTCGACATTGCCCCTGAAAAGGGTGCGTGAGTATACCCTTTTTCTCTTTTTCGTGGGCGGTTATGAGCAATCTTACTTATCtt                                         <  2:2946429/100‑1 (MQ=255)
                                                             cctGAATGATAAAATTTCGACATTGCCCCTGAAAAGGGTGCGTGAGTATACCCTTTTTTTTTTTTTTTTGTGCGGGTATGAGCAATCTTACTTATCTTCa                                       >  2:2580172/1‑100 (MQ=255)
                                                                gAATGATAAAATTTCGACATTGCCCCTGAAAAGGGTGCGTGAGTATACCCTTTTTCTCTTTTTCGTGGGCGGTTATGAGCAATCTTACTTATCTTCAggg                                    <  2:3656665/100‑1 (MQ=255)
                                                                gAATGATAAAATTTCGACATTGCCCCTGAAAAGGGTGCGTGAGTATACCCTTTTTCTCTTTTTCGTGGGCGGTTATGAGCAATCTTACTTATCTTCAggg                                    >  1:1526132/1‑100 (MQ=255)
                                                                   tGACAAAAATTCGACATTGCCCCTCATATGGGTGCGTGAGTATACCCTTTTTCTCTTTTTCGTGGGCTGTTATCAGCAATCTTCCTTACCTTCAGGGtga                                 <  2:811133/100‑3 (MQ=255)
                                                                      tAAAATTTCGACATTGCCCCTGAAAAGGGTGCGTGAGTATACCCTTTTTCTCTTTTTCGTGGGCGGTTATAAGCAATCTTACTTATCTTCAGGGTTATcc                              <  1:2101409/100‑1 (MQ=255)
                                                                       aaaaTTTCGACATTGCCCCTGAAAAGGGTGCGTGAGTATACCCTTTTTCTCTTTTTCGTGGGCGGTTATGAGCAATCTTACTTATCTTCAGGGTTATccc                             <  2:2406740/100‑1 (MQ=255)
                                                                       aaaaTTTCGACATTGCCCCTGAAAAGGGTGCGTGAGTATACCCTTTTTCTCTTTTTCGTGGGCGGTTATGAGCAATCTTACTTATCTTCAGGGTTATccc                             <  1:980476/100‑1 (MQ=255)
                                                                        aaaGTTCGACATTGCCCCTGAAAAGGGCGCGTGATTATACCCTTTTTCTCTTTTTCGTGGGCGGTTATGAGCAATCTTACTTATCTTCAGGGTTATCCCg                            <  1:3187150/100‑1 (MQ=255)
                                                                         aaTTTCGACATTGCCCCTGAAAAGGGTGCGTGAGTATACCCTTTTTCTCTTTTTCGTGGGCGGTTATGAGCAATCTTACTTATCTTCAGGGTTATCCCGa                           >  1:12698/1‑100 (MQ=255)
                                                                         aaTTTCGACATTGCCCCTGAAAAGGGTGCGTGAGTATACCCTTTTTCTCTTTTTCGTGGGCGGTTATGAGCAATCTTACTTATCTTCAGGGTTATCCCGa                           >  1:3538212/1‑100 (MQ=255)
                                                                             tCGACATTGCCCCTGAAAAGGGTGCGTGAGTATACCCTTTTTCTCTTTTTTTTTTTTTTTTTTGAGCAATCTTACTTATCTTCAGGGTTATCCCGagc                         >  2:1518956/1‑98 (MQ=255)
                                                                             tCGACATTGCCCCTGAAAAGGGTGCGTGAGTATACCCTTTTTCTCTTTTTCGTGGGCGGTTATGAGCAATCTTACTTATCTTCAGGGTTATCCCGagcag                       >  1:694028/1‑100 (MQ=255)
                                                                             tCGACATTGCCCCTGAAAAGGGTGCGTGAGTATACCCTTTTTCTCTTTTTCGTGGGCGGTTATGAGCAATCTTACTTATCTTCAGGGTTATCCCGagcag                       >  2:683029/1‑100 (MQ=255)
                                                                              cGACATTGCCCCTGAAAAGGGTGCGTGAGTATACCCTTTTTCTCTTTTTCGTGGGCGGTTATGAGCAATCTTACTTATCTTCAGGGTTATCCCGagcagc                      >  1:694660/1‑100 (MQ=255)
                                                                              cGACATTGCCCCTGAAAAGGGTGCGTGAGTATACCCTTTTTCTCTTTTTCGTGGGCGGTTATGAGCAATCTTACTTATCTTCAGGGTTATCCCGagcag                       >  1:2301171/1‑99 (MQ=255)
                                                                                  aTTGCCCCTGAAAAGGGTGCGTGAGTATACCCTTTTTCTCTTTTTCGTGGGCGGTTATGAGCAATCTTACTTATCTTCAGGGTTATCCCGAGCAGCTACt                  >  1:2333950/1‑100 (MQ=255)
                                                                                    tGCCCCTGAAAAGGGTGCGTGAGTATACCCTTTTTCTCTTTTTCGTGGGCGGTTATGAGCAATCTTACTTATCTTCAGGGTTATCCCGAGCAGCTACttt                <  2:523046/100‑1 (MQ=255)
                                                                                     gCCCCTGAAAAGGGTGCGTGAGTATacccttttcaggggcaatgtcgaaattttatcattcaggagggccgatgagccacttagacaacggtttccgttc               <  2:2947259‑M2/100‑76 (MQ=255)
                                                                                     gCCCCTGAAAAGGGTGCGTGAGTATACCCTTTTTCTCTTTTTCGTGGGCGGTTATTAGCAATCTTACTTATCCTCAGGGTTATCCCGAGCAGCTACTTTc               <  2:1816796/100‑1 (MQ=255)
                                                                                     gCCCCTGAAAAGGGTGCGTGAGTATACCCTTTTTCTCTTTTTCGTGGGCGGTTATGAGCAATCTTACTTATCTTCAGGGTTATCCCGAGCAGCTACTTTc               <  2:1591126/100‑1 (MQ=255)
                                                                                     gCCCCTGAAAAGGGTGCGTGAGTATACCCTTTTTCTCTTTTTCGTGGGCGGTTATGAGCAATCTTACTTATCTTCAGGGTTATCCCGAGCAGCTACTTTc               <  1:1556026/100‑1 (MQ=255)
                                                                                       cccTGAAAAGGGTGCGTGAGTATacccttttcaggggcaatgtcgaaattttatcattcaggagggccgatgagccacttagacaacggtttccgttcac             <  1:1039140‑M2/100‑78 (MQ=255)
                                                                                       cccTGAAAAGGGTGCGTGAGTATacccttttcaggggcaatgtcgaaattttatcattcaggagggccgatgagccacttagacaacggtttccgttcac             <  2:2930456‑M2/100‑78 (MQ=255)
                                                                                       cccTGAAAAGGGTGCGTGAGTATacccttttcaggggcaatgtcgaaattttatcattcaggagggccgatgagccacttagacaacggtttccgttcac             <  1:3270002‑M2/100‑78 (MQ=255)
                                                                                       cccTGAAAAGGGTGCGTGAGTATacccttttcaggggcaatgtcgaaattttatcattcaggagggccgatgagccacttagacaacggtttccgttca              <  2:1290975‑M2/99‑77 (MQ=255)
                                                                                       cccTGAAAAGGGTGCGTGAGTATACCCTTTTTCTCTTTTTCGTGGGCGGTTATGAGCAATCTTACTTATCTTCAGGGTTATCCCGAGCAGCTACTTTccc             <  2:613967/100‑1 (MQ=255)
                                                                                        ccTGAAAAGGGTGCGTGAGTATacccttttcaggggcaatgtcgaaattttatcattcaggagggccgatgagccacttagacaacggtttccgttcact            <  2:258076‑M2/100‑79 (MQ=255)
                                                                                        ccTGAAAAGGGTGCGTGAGTATACCCTTTTTCTCTTTTTCGTGGGCGGTTATGAGCAATCTTACTTATCTTCAGGGTTATCCCGAGCAGCTACTTTCCCa            >  2:2749058/1‑100 (MQ=255)
                                                                                        ccTGAAAAGGGTGCGTGAGTATACCCTTTTTCTCTTTTTCGTGGGCGGTTATGAGCAATCTTACTTATCTTCAGGGTTATCCCGAGCAGCTACTTTCCCa            <  2:95126/100‑1 (MQ=255)
                                                                                        ccTGAAAAGGGTGCGTGAGTATACCCTTTTTCTCTTTTTCGTGGGCGGTTATGAGCAATCTTACTTATCTTCAGGGTTATCCCGAGCAGCTACTTTCCCa            <  1:536266/100‑1 (MQ=255)
                                                                                          tGAAAAGGGTGCGTGAGTATacccttttcaggggcaatgtcgaaattttatcattcaggagggccgatgagccacttagacaacggtttccgttcactga          <  2:671049‑M2/100‑81 (MQ=255)
                                                                                          tGAAAAGGGTGCGTGAGTATacccttttcaggggcaatgtcgaaattttatcattcaggagggccgatgagccacttagacaacggtttccgttcactga          <  1:1478791‑M2/100‑81 (MQ=255)
                                                                                          tGAAAAGGGTGCGTGAGTATACCCTTTTTCTCTTTTTCGTGGGCGGTTATGAGCAATCTTACTTATCTTCAGGGTTATCCCGAGCAGCTACTTTCCCAgg          >  2:2002622/1‑100 (MQ=255)
                                                                                          tGAAAAGGGTGCGTGAGTATACCCTTTTTCTCTTTTTCGTGGGCGGTTATGAGCAATCTTACTTATCTTCAGGGTTATCCCGAGCAGCTACTTTCCCAgg          <  1:1691660/100‑1 (MQ=255)
                                                                                            aaaaGGGTGCGTGAGTATACCCTTTTTCTCTTTTTCGTGGGCGGTTATGAGCAATCTTACTTATCTTCAGGGTTATCCCGAGCAGCTACTTTCCCAGGTg        >  1:2988755/1‑100 (MQ=255)
                                                                                              aaGGGTGCGTGAGTATACCCTTTTTCTCTTTTTCGTGGGCGGTTATGAGCAATCTTACTTATCTTCAGGGTTATCCCGAGCAGCTACTTTCCCAGGTGCg      <  2:788398/100‑1 (MQ=255)
                                                                                              aaGGGTGCGTGAGTATACCCTTTTTCTCTTTTTCGTGGGCGGTTATGAGCAATCTTACTTATCTTCAGGGTTATCCCGAGCAGCTACTTTCCCAGGTGCg      <  2:2673581/100‑1 (MQ=255)
                                                                                                gggTatactcacgcacccttttcaggggcaatgtcgaaattttatcattcaggagggccgatgagccacttagacaacggtttccgttcactgacactac    <  1:1646852‑M1/100‑97 (MQ=255)
                                                                                                gggTGCGTGAGTAAACCCTTTTTCTCTTTTTCGTGGGCGGTTATGAGCAATCTTACTTATCTTCAGGGTTATCCCGAGCAGCTACTTTCCCAGGTGCGaa    >  2:2350356/1‑100 (MQ=255)
                                                                                                  gTatactcacgcacccttttcaggggcaatgtcgaaattttatcattcaggagggccgatgagccacttagacaacggtttccgttcactgacactacaa  <  1:1760272‑M1/100‑99 (MQ=255)
                                                                                                   |                                                                                                  
CGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAATTTCGACATTGCCCCTGAAAAGGGTGCGTGAGTATACCCTTTTTCTCTTTTTCGTGGGCGGTTATGAGCAATCTTACTTATCTTCAGGGTTATCCCGAGCAGCTACTTTCCCAGGTGCGAACA  >  NC_000913/3235822‑3236019

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.