| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC | NC_000913 | 3,596,220 | (TCA)3→2 | 100% | coding (182‑184/927 nt) | livH ← | branched‑chain amino acid ABC transporter permease |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3596215 = | 1 (0.010) | 134 (1.080) | 78/162 | NT | 99.3% | coding (189/927 nt) | livH | branched‑chain amino acid ABC transporter permease |
| ? | NC_000913 | = 3596211 | 1 (0.010) | coding (193/927 nt) | livH | branched‑chain amino acid ABC transporter permease | |||||
Only 100 of 165 total aligned reads displayed.
TAAGCCACCCGTTCGATACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATG > NC_000913/3596117‑3596314 | cggtaagccacccgttcgatactccagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccca < 1:3341984‑M1/2‑1 (MQ=255)cggtaagccacccgttcgatactccagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccca > 2:3215673‑M1/99‑100 (MQ=255) ggtaagccacccgttcgatactccagccgtaggcgctggcaatgacgattgcgcggacgaatcccgcagctaccagcagccagccggtatcaatgccctn > 2:3616596‑M1/98‑98 (MQ=255) gtaagccacccgttcgatactccagccgtaggcgctggcaatgtcgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgcccatc > 2:2449752‑M1/97‑100 (MQ=255) gtaagccacccgttcgatactccagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgcccatc < 1:3317408‑M1/4‑1 (MQ=255) agccacccgttcgatattccagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCatcatc > 2:2225701‑M1/94‑100 (MQ=255) agccacccgttcgatactccagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCatcatc < 1:3696682‑M1/7‑1 (MQ=255) agccacccgttcgatactccagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCatcatc > 1:55695‑M1/94‑100 (MQ=255) gccacccgttcgatactccagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCAtcatca < 1:1088544‑M1/8‑1 (MQ=255) gccacccgttcgatactccagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCAtcatca < 1:615637‑M1/8‑1 (MQ=255) cacccgttcgatactccagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAgc > 2:1173340‑M1/91‑100 (MQ=255) cgttcgatactccagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCgcgg < 2:1342349‑M1/14‑1 (MQ=255) gttcgatactccagcagtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCgcggc > 1:3757222‑M1/86‑100 (MQ=255) tcgatactccagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCga < 2:3473600‑M1/17‑1 (MQ=255) cgatactccagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCgat > 1:433345‑M1/83‑100 (MQ=255) gatactccagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCgatg > 2:2000616‑M1/82‑100 (MQ=255) ctccagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCgatgat > 2:807089‑M1/78‑98 (MQ=255) ctccagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCa < 2:89132‑M1/23‑1 (MQ=255) ctccagccgtaggcgctggcaatgacgattgcgccgacgaatcacgccgctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCa < 2:3235438‑M1/23‑1 (MQ=255) tccagccgtaggcgctggcaatgacgattgtgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCAt < 2:421251‑M1/24‑1 (MQ=255) tccagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagccgccagccggtatcaatgccCCTCATCAGCGCGGCGATGATCAt < 2:1702906‑M1/24‑1 (MQ=255) cagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATaa < 1:2543095‑M1/26‑1 (MQ=255) cagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATaa < 1:2880757‑M1/26‑1 (MQ=255) agcggtaggcgctggcaatgactattgcgccgacgaagcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATaaa > 1:3616328‑M1/74‑100 (MQ=255) agccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATaaa > 1:1796535‑M1/74‑100 (MQ=255) ccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATg > 1:717744‑M1/72‑100 (MQ=255) ccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATg > 1:1428049‑M1/72‑100 (MQ=255) gtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccaaccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATgag > 2:2095504‑M1/70‑100 (MQ=255) gcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGt < 2:3808810‑M1/35‑1 (MQ=255) ctggcagtgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGc > 2:3273329‑M1/63‑100 (MQ=255) tggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCt < 1:307001‑M1/39‑1 (MQ=255) ggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTg < 1:3735986‑M1/40‑1 (MQ=255) ggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTg > 1:3285674‑M1/61‑100 (MQ=255) gcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGc > 2:1754837‑M1/60‑100 (MQ=255) caatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATgatcataaatgagatcggaagagc < 1:1019235‑M1/42‑11 (MQ=255) caatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGcc < 1:320167‑M1/42‑1 (MQ=255) caatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGcc > 2:3658780‑M1/59‑100 (MQ=255) caatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGcc > 1:1515035‑M1/59‑100 (MQ=255) caatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGcc > 2:1054170‑M1/59‑100 (MQ=255) caatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGcc < 1:3639775‑M1/42‑1 (MQ=255) atgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCaa < 1:1009194‑M1/44‑1 (MQ=255) tgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAAt > 2:1196416‑M1/56‑100 (MQ=255) cgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCat > 1:1631598‑M1/53‑100 (MQ=255) cgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCat < 1:2536805‑M1/48‑1 (MQ=255) gattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCata > 2:1272053‑M1/52‑100 (MQ=255) gagtgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCata > 2:3454998‑M1/52‑100 (MQ=255) gcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATaaa < 2:3732193‑M1/53‑1 (MQ=255) cgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAAc < 1:1148181‑M1/54‑1 (MQ=255) cgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAAc < 2:2850302‑M1/54‑1 (MQ=255) gccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAAcc > 2:2820150‑M1/46‑100 (MQ=255) ccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCt < 1:1116046‑M1/56‑1 (MQ=255) cgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACctt < 1:2791729‑M1/57‑2 (MQ=255) gacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCg < 2:2619810‑M1/58‑1 (MQ=255) acgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGTCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGc > 1:2201913‑M1/42‑100 (MQ=255) acgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGc > 1:2336946‑M1/42‑100 (MQ=255) cgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGcc < 1:3589865‑M1/60‑1 (MQ=255) cgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATAGAAACCTCGcc < 1:1788967‑M1/60‑1 (MQ=255) atcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTg > 1:2981034‑M1/38‑100 (MQ=255) tcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAATTGAGACGTAGCTGCCAATCATATAAACCTCgccgagg < 2:1650567‑M1/64‑4 (MQ=255) tcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTgg > 1:3445863‑M1/37‑100 (MQ=255) tcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTgg > 1:763563‑M1/37‑100 (MQ=255) cccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCACTCATATAAACCTCGCCGTggg < 2:3155528‑M1/65‑1 (MQ=255) cccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTggg < 1:1317801‑M1/65‑1 (MQ=255) cccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTggg > 2:2530472‑M1/36‑100 (MQ=255) cccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTggg > 1:2385600‑M1/36‑100 (MQ=255) cccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTggg > 1:1894892‑M1/36‑100 (MQ=255) cccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAAGGAGACGTAGCGGCGAATCATATAAACCTCGCCGTggg > 1:3603647‑M1/36‑100 (MQ=255) ccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGc < 2:3673964‑M1/66‑1 (MQ=255) cgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCg < 2:3704817‑M1/67‑1 (MQ=255) gcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGa < 2:832480‑M1/68‑1 (MQ=255) gctaccagcagccagcaggtatcaatgccCATCATCAGCGCGGAGATGAACATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGt > 2:180661‑M1/30‑100 (MQ=255) taccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTg > 1:1732385‑M1/28‑100 (MQ=255) accagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGa < 2:3678603‑M1/74‑1 (MQ=255) accagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGa < 1:2018533‑M1/74‑1 (MQ=255) accagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGa < 2:288940‑M1/74‑1 (MQ=255) ccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGAt < 2:3121134‑M1/75‑1 (MQ=255) cagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATg > 2:3777169‑M1/22‑100 (MQ=255) agccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAGTGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGc < 2:2115418‑M1/80‑1 (MQ=255) gccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGcc < 2:2782765‑M1/81‑1 (MQ=255) gccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGcc > 1:2638022‑M1/20‑100 (MQ=255) agccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGAt < 2:2198754‑M1/84‑1 (MQ=255) gccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATa > 1:1531643‑M1/16‑100 (MQ=255) gccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATa > 1:1251277‑M1/16‑100 (MQ=255) ccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATaa > 1:330001‑M1/15‑100 (MQ=255) gtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAAt > 2:749873‑M1/12‑98 (MQ=255) gtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGc > 1:832489‑M1/12‑100 (MQ=255) gtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGc > 1:2732124‑M1/12‑100 (MQ=255) gtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGc > 1:3124897‑M1/12‑100 (MQ=255) atcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCg > 1:147066‑M1/10‑100 (MQ=255) atcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCg < 2:3020128‑M1/91‑1 (MQ=255) tcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTCGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGt < 2:1756258‑M1/92‑1 (MQ=255) caatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTa < 2:3430130‑M1/93‑1 (MQ=255) caatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTa < 1:673702‑M1/93‑1 (MQ=255) caatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTa < 1:1035171‑M1/93‑1 (MQ=255) aatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTaa < 2:1609665‑M1/94‑1 (MQ=255) aatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTaa > 1:3473627‑M1/7‑100 (MQ=255) ccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCa < 1:3419110‑M1/98‑1 (MQ=255) atcatcatcAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCa > 1:2922287/1‑100 (MQ=255) catcatcaGTGCGGAGATGATCATAGATGAGACGTAACTGCTAATCATATAAACCTCGACGTGGGCGAAGTTGATAATACCGATAATGCCGTAAATCAt > 2:2623313/1‑99 (MQ=255) CATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATg < 1:197543‑M1/100‑1 (MQ=255) | TAAGCCACCCGTTCGATACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATG > NC_000913/3596117‑3596314 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |