| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC | NC_000913 | 3,596,220 | (TCA)3→2 | 100% | coding (182‑184/927 nt) | livH ← | branched‑chain amino acid ABC transporter permease |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3596215 = | 1 (0.010) | 134 (1.080) | 78/162 | NT | 99.3% | coding (189/927 nt) | livH | branched‑chain amino acid ABC transporter permease |
| ? | NC_000913 | = 3596211 | 1 (0.010) | coding (193/927 nt) | livH | branched‑chain amino acid ABC transporter permease | |||||
Only 100 of 163 total aligned reads displayed.
GGCGGTAAGCCACCCGTTCGATACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAAC > NC_000913/3596112‑3596310 | ggCGGTAAGCCACCCGTTCGATACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGcc < 2:1833434/100‑1 (MQ=255) cGGTAAGCCACCCGTTCGATACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCca < 1:3341984‑M2/100‑3 (MQ=255) ggTAAGCCACCCGTTCGATACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCGGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCctn > 2:3616596‑M2/1‑97 (MQ=255) gTAAGCCACCCGTTCGATACTCCAGCCGTAGGCGCTGGCAATGTCGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatc > 2:2449752‑M2/1‑96 (MQ=255) gTAAGCCACCCGTTCGATACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatc < 1:3317408‑M2/100‑5 (MQ=255) gTAAGCCACCCGTTCGATACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatc < 2:3356285‑M2/100‑5 (MQ=255) aGCCACCCGTTCGATATTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatc > 2:2225701‑M2/1‑93 (MQ=255) aGCCACCCGTTCGATACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatc < 1:3696682‑M2/100‑8 (MQ=255) gCCACCCGTTCGATACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatca < 1:1088544‑M2/100‑9 (MQ=255) gCCACCCGTTCGATACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatca < 1:615637‑M2/100‑9 (MQ=255) ccACCCGTTCGATACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcag < 1:553172‑M2/100‑10 (MQ=255) cACCCGTTCGATACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagc > 2:1173340‑M2/1‑90 (MQ=255) cACCCGTTCGATACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagc < 1:1524435‑M2/100‑11 (MQ=255) cGTTCGATACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcgg > 1:3094322‑M2/1‑86 (MQ=255) gTTCGATACTCCAGCAGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggc > 1:3757222‑M2/1‑85 (MQ=255) tACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgat < 1:3733713‑M2/100‑22 (MQ=255) cTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGCATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatca < 1:630171‑M2/100‑24 (MQ=255) cTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatca < 2:89132‑M2/100‑24 (MQ=255) cTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatca > 1:3296530‑M2/1‑77 (MQ=255) cTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatca > 1:708657‑M2/1‑77 (MQ=255) cTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgat > 2:807089‑M2/1‑77 (MQ=255) cTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCACGCCGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatca < 2:3235438‑M2/100‑24 (MQ=255) tCCAGCCGTAGGCGCTGGCAATGACGATTGTGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcat < 2:421251‑M2/100‑25 (MQ=255) aGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaa > 1:1796535‑M2/1‑73 (MQ=255) gCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaat < 1:1767771‑M2/100‑29 (MQ=255) ccGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatg > 2:1189649‑M2/1‑71 (MQ=255) ccGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatg > 1:1428049‑M2/1‑71 (MQ=255) ccGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatg > 2:245478‑M2/1‑71 (MQ=255) gTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgag > 1:2109070‑M2/1‑69 (MQ=255) gTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAACCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgag > 2:2095504‑M2/1‑69 (MQ=255) ggCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacg < 1:893958‑M2/100‑35 (MQ=255) gcgcTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgt < 2:3808810‑M2/100‑36 (MQ=255) tGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagct < 1:307001‑M2/100‑40 (MQ=255) ggCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctg > 1:3285674‑M2/1‑60 (MQ=255) cAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagatcggaagagc < 1:1019235‑M2/100‑43 (MQ=255) cAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgcc < 1:320167‑M2/100‑43 (MQ=255) cAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgcc < 1:3639775‑M2/100‑43 (MQ=255) cAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgcc > 1:1515035‑M2/1‑58 (MQ=255) cAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgcc > 2:3658780‑M2/1‑58 (MQ=255) aTGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaa < 1:1009194‑M2/100‑45 (MQ=255) aCGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatca > 2:1767761‑M2/1‑53 (MQ=255) cGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcat < 1:2536805‑M2/100‑49 (MQ=255) cGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcat > 1:1631598‑M2/1‑52 (MQ=255) gATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcata > 2:1272053‑M2/1‑51 (MQ=255) gAGTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcata > 2:3454998‑M2/1‑51 (MQ=255) tGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcaccatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataa < 1:3470515‑M2/100‑53 (MQ=255) gcgcCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaa < 2:3732193‑M2/100‑54 (MQ=255) cgcCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaac < 1:1148181‑M2/100‑55 (MQ=255) cgcCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaac < 2:2850302‑M2/100‑55 (MQ=255) cgcCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaac < 2:3109817‑M2/100‑55 (MQ=255) ccGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacct < 1:1116046‑M2/100‑57 (MQ=255) gacgaATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcg < 2:2619810‑M2/100‑59 (MQ=255) acgaATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcgtcgatgatcataaatgagacgtagctgccaatcatataaacctcgc > 1:2201913‑M2/1‑41 (MQ=255) acgaATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgc > 1:2336946‑M2/1‑41 (MQ=255) aTCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtg > 1:2981034‑M2/1‑37 (MQ=255) tCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataattgagacgtagctgccaatcatataaacctcgccgagg < 2:1650567‑M2/100‑65 (MQ=255) tCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgg > 1:3445863‑M2/1‑36 (MQ=255) tCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgg > 1:763563‑M2/1‑36 (MQ=255) cccGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccactcatataaacctcgccgtggg < 2:3155528‑M2/100‑66 (MQ=255) cccGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtggg < 1:1317801‑M2/100‑66 (MQ=255) cccGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtggg < 1:3608630‑M2/100‑66 (MQ=255) cccGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtggg < 1:2889756‑M2/100‑66 (MQ=255) cccGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtggg > 1:1894892‑M2/1‑35 (MQ=255) cccGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtggg > 2:1737605‑M2/1‑35 (MQ=255) cccGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaaggagacgtagcggcgaatcatataaacctcgccgtggg > 1:3603647‑M2/1‑35 (MQ=255) ccGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtg < 2:1505093‑M2/97‑64 (MQ=255) cGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcg < 2:3704817‑M2/100‑68 (MQ=255) gCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcga < 2:832480‑M2/100‑69 (MQ=255) tACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttg < 2:184170‑M2/100‑74 (MQ=255) tACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttg < 2:2622687‑M2/100‑74 (MQ=255) tACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttg > 1:1732385‑M2/1‑27 (MQ=255) aCCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttga < 2:288940‑M2/100‑75 (MQ=255) aCCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttga < 2:120144‑M2/100‑75 (MQ=255) aCCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttga < 2:3678603‑M2/100‑75 (MQ=255) ccAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttgat < 2:2127233‑M2/100‑76 (MQ=255) ccAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttgat < 2:3121134‑M2/100‑76 (MQ=255) cagccagcCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttgatcatg > 2:3777169‑M2/1‑21 (MQ=255) agccagccGGTATCAATGCCcatcatcagcgcggcgatgatcataagtgagacgtagctgccaatcatataaacctcgccgtgggcgaagttgatcatgc < 2:2115418‑M2/100‑81 (MQ=255) agccagccGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttgatcatg < 2:1647383‑M2/99‑80 (MQ=255) gccagccGGTATCAATGCCcatcatcagcgcggcgatgatcatacatgagacgtagctgccaatcatataaacatcgccgtgggcgaagttgaacatgcc < 2:3677697‑M2/100‑82 (MQ=255) gccagccGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttgatcatgcc < 1:2414438‑M2/100‑82 (MQ=255) gccagccGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttgatcatgcc < 2:2782765‑M2/100‑82 (MQ=255) gccGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttgatcatgccgata < 1:2801338‑M2/100‑86 (MQ=255) gccGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttgatcatgccgata > 1:1251277‑M2/1‑15 (MQ=255) cGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttgatcatgccgataat < 1:3790766‑M2/100‑88 (MQ=255) gTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttgatcatgccgataatgc > 1:792794‑M2/1‑11 (MQ=255) gTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttgatcatgccgataatgc > 1:2732124‑M2/1‑11 (MQ=255) gTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttgatcatgccgataat > 2:749873‑M2/1‑11 (MQ=255) aTCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttgatcatgccgataatgccg < 2:3577011‑M2/100‑92 (MQ=255) aTCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttgatcatgccgataatgccg > 1:1938764‑M2/1‑9 (MQ=255) aTCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttgatcatgccgataatgccg > 1:147066‑M2/1‑9 (MQ=255) tCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtcgctgccaatcatataaacctcgccgtgggcgaagttgatcatgccgataatgccgt < 2:1756258‑M2/100‑93 (MQ=255) cAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttgatcatgccgataatgccgta < 1:1035171‑M2/100‑94 (MQ=255) cAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttgatcatgccgataatgccgta < 2:3430130‑M2/100‑94 (MQ=255) aaTGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttgatcatgccgataatgccgtaa > 1:3513455‑M2/1‑6 (MQ=255) aTGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttgatcatgccgataatgccgtaaa < 2:282448‑M2/100‑96 (MQ=255) tGCCcatcatcagcgcggcgatgatcataaatgagacgtagcggccaatcatataaacctcgccgtgggcgaagttgatcatgccgataatgccgtaaac > 1:3408794‑M2/1‑4 (MQ=255) cccatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttgatcatgccgataatgccgtaaacca < 1:2558078‑M2/100‑99 (MQ=255) ccatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttgatcatgccgataatgccgtaaaccat < 1:2646459‑M2/100‑100 (MQ=255) ccatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttgatcatgccgataatgccgtaaaccat < 2:3231613‑M2/100‑100 (MQ=255) | GGCGGTAAGCCACCCGTTCGATACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAAC > NC_000913/3596112‑3596310 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |