New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4601057 =173 (1.270)9 (0.070) 8/168 NT 5.3% coding (461/540 nt) dnaT DNA biosynthesis protein (primosomal protein I)
?NC_000913 4601089 = 157 (1.220)coding (429/540 nt) dnaT DNA biosynthesis protein (primosomal protein I)
Rejected: Frequency below cutoff threshold.

Only 100 of 207 total aligned reads displayed.

GTCGCCAACGTTTTTCATCGTTACCCTCTGAATCCTGGTGGAATTTGGCTGTCAGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCAATGAATGAGGCCA  >  NC_000913/4600958‑4601156
                                                                                                   |                                                                                                   
  cGCCAACGTTTTTCATCGTTACCCTCTGAATCCTGGTGGAATTTGGCTGTCAGGTTCGCTGACCGTATTCACATCTCGTTTCGACAGTCCGCCGTTGCTg                                                                                                   >  2:661387/1‑100 (MQ=255)
   gCCAACGTTTTTCATCGTTACCCTCTGAATCCTGGTGGAATTTGGCTGTCAGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTgg                                                                                                  <  1:2031612/100‑1 (MQ=255)
   ctaagagagccggtgaccaccgaagaactggcctcattcattgcctactggcaggcggaaggtaaagtctttcaccatgtgcagtggcaacaaaaaCTgg                                                                                                  <  1:2135517‑M1/4‑1 (MQ=255)
    ccAACGTTTTTCATCGTTACCCTCTGAATCCTGGTGGAATTTGGCTGTCAGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGc                                                                                                 <  1:268433/100‑1 (MQ=255)
       aCGTTTTTCATCGTTACCCTCTGAATCCTGGTGGAATTTGGCTGTCAGGTTCGCTGACCGTATTCACCTCTCGTTTCGGCAGTCCGCCGTTGCTGGCACg                                                                                              <  1:3620470/100‑1 (MQ=255)
        cGTTTTTCATCGTTACCCTCTGAATCCTGGTGGAATTTGGCTGTCAGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGa                                                                                             >  1:484000/1‑100 (MQ=255)
          tttttCATCGTTACCCTCTGAATCCTGGTGGAATTTGGCTGTCAGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGAcc                                                                                           <  1:561125/100‑1 (MQ=255)
             ttCATCGTTACCCTCTGCATCCTGGTGGAATTTGGCTGGCAGGTTCGCTGACCGTATTCACATATCGTTTCGGTAGTCCGCCGTTGCTTGCACGACCgct                                                                                        >  2:884737/1‑98 (MQ=255)
             ttCATCGTTACCCTCTGAATCCTGGTGGAATTTGGCTGTCAGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGAt                                                                                        <  2:2735306/100‑1 (MQ=255)
             ttCATCGTTACCCTCTGAATCCTGGTGGAATTTGGCTGTCAGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGAt                                                                                        <  2:13070/100‑1 (MQ=255)
              tCATCGTTACCCTCTGAATCCTGGTGGAATTTGGCTGTCAGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGGTGGCACGACCGAtt                                                                                       >  2:2597306/1‑100 (MQ=255)
              tCATCGTTACCCTCTGAATCCTGGTGGAATTTGGCTGTCAGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGAtt                                                                                       >  2:1326505/1‑100 (MQ=255)
                 tCGTTACCCTCTGAATCCTGGTGGAATTTGGCTGTCAGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGc                                                                                    >  1:3382275/1‑100 (MQ=255)
                 tCGTTACCCTCTGAATCCTGGTGGAATTTGGCTGTCAGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGc                                                                                    <  1:3586498/100‑1 (MQ=255)
                  cGTTACCCTCTGAATCCTGGTGGAATTTGGCTGTCAGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCa                                                                                   <  2:808514/100‑1 (MQ=255)
                     tACCCTCTGAATCCTGGTGGAATTTGGCTGTCAGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGc                                                                                >  2:1040398/1‑100 (MQ=255)
                        ccTCTGAATCCTGGTGGAATTTGGCTGTCAGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTgc                                                                             >  2:1708733/1‑100 (MQ=255)
                        ccTCTGAATCCTGGTGGAATTTGGCTGTCAGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTCGCTGGCACGACCGATTTGCAGGCTgc                                                                             >  1:1141268/1‑100 (MQ=255)
                          tctGAATCCTGGTGGAATTTGGCTGTCAGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTgcgc                                                                           <  1:2553253/100‑1 (MQ=255)
                          tctGAATCCTGGTGGAATTTGGCTGTCAGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGATgcgc                                                                           >  2:712464/1‑100 (MQ=255)
                            tGAATCCTGGTGGAATTTGGCTGTCAGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTgcgcgc                                                                         >  1:1923225/1‑100 (MQ=255)
                            tGAATCCTGGTGGAATTTGGCTGTCAGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTgcgcgc                                                                         >  1:1248560/1‑100 (MQ=255)
                             gAATCCTGGTGGAATTTGGCTGTCAGGTTCGCTGACCGTATTCTCATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGcc                                                                        <  2:2441783/100‑1 (MQ=255)
                             actggcctcattcattgcctactggcaggcggaaggtaaagtctttcaccatgtgcagtggcaacaaaaaCTGGCACGACCGATTTGCAGGCTGCGCGcc                                                                        >  1:627493‑M1/71‑100 (MQ=255)
                                  cTGGTGGAATTTGGCTGTCAGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGttt                                                                   >  1:1846240/1‑100 (MQ=255)
                                   tggtggAATTTGGCTGTCAGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGGTTTGCAGGCTGCGCGCCAGtttt                                                                  >  1:1325280/1‑100 (MQ=255)
                                   tggtggAATTTGGCTGTCAGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGtttt                                                                  >  1:832638/1‑100 (MQ=255)
                                   tggtggAATTTGGCTGTCAGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGtttt                                                                  >  2:1107424/1‑100 (MQ=255)
                                   tggtggAATTTGGCTGTCAGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGtttt                                                                  >  1:1474880/1‑100 (MQ=255)
                                   ctcattcattgcctactggcaggcggaaggtaaagtctttcaccatgtgcagtggcaacaaaaaCTGGCACGACCGATTTGCAGGCTGCGCGCCAGtttt                                                                  >  1:504017‑M1/65‑100 (MQ=255)
                                     tcggAATTTGGCTGTCACGTTCTCTCGCCGTATTCACATCTCTTTTCGGCAGTCCTCCGTTGGTGGCACGACCGATTTGCAGGCCGCGCGCCAGtttt                                                                  <  2:2317512/96‑1 (MQ=255)
                                     gtggAATTTGGCTGTCAGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTttg                                                                <  2:1909327/100‑1 (MQ=255)
                                      tggAATTTGGCTGTCAGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTttgt                                                               >  1:1379313/1‑100 (MQ=255)
                                      attcattgcctactggcaggcggaaggtaaagtctttcaccatgtgcagtggcaacaaaaaCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTttgt                                                               >  2:3062318‑M1/62‑100 (MQ=255)
                                      attcattgcctactggcaggcggaaggtaaagtctttcaccatgtgcagtggcaacaaaaaCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTttgt                                                               >  2:3455236‑M1/62‑100 (MQ=255)
                                      attcattgcctactggcaggcggaaggtaaagtctttcaccatgtgcagtggcaacaaaaaCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTttg                                                                >  1:887767‑M1/62‑99 (MQ=255)
                                        tcattgcctactggcaggcggaaggtaaagtctttcaccatgtgcagtggcaacaaaaaCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTttgttg                                                             >  1:753522‑M1/60‑100 (MQ=255)
                                        tcattgcctactggcaggcggaaggtaaagtctttcaccatgtgcagtgaaaaaaaaaaCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTttgtt                                                              >  2:279616‑M1/60‑99 (MQ=255)
                                        gAATTTGGCTGTCAGGTTCGCTGACCGTATTCACAGCTCGTTTCGGCAGTCCGCCGTTGTTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTttgttg                                                             <  2:1021511/100‑1 (MQ=255)
                                         aaTTTGGCTGTCAGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGc                                                            <  1:1040407/100‑1 (MQ=255)
                                          aTTTGGCTGTCAGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGcc                                                           <  1:2705511/100‑1 (MQ=255)
                                          aTTTGGCTGTCAGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGcc                                                           <  1:2476290/100‑1 (MQ=255)
                                            ttGGCTGTCAGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCAc                                                         <  1:3032811/100‑1 (MQ=255)
                                               gCTGTCAGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTg                                                       >  2:1266989/1‑99 (MQ=255)
                                               gCTGTCAGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGc                                                      <  2:3346958/100‑1 (MQ=255)
                                                 tGTCAGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTTCCACTGcac                                                    >  2:239409/1‑100 (MQ=255)
                                                  gTCAGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGcaca                                                   >  2:2831363/1‑100 (MQ=255)
                                                     aGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATgg                                                <  1:2824927/100‑1 (MQ=255)
                                                     aGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATgg                                                <  1:260906/100‑1 (MQ=255)
                                                      ggTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGt                                               <  1:1312269/100‑1 (MQ=255)
                                                      ggTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGt                                               >  2:1381036/1‑100 (MQ=255)
                                                       gTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTg                                              <  1:15342/100‑1 (MQ=255)
                                                       gTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTg                                              >  1:1750689/1‑100 (MQ=255)
                                                        ttCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGa                                             <  2:3521781/100‑1 (MQ=255)
                                                        ttCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGa                                             <  2:2219573/100‑1 (MQ=255)
                                                         tCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGaa                                            >  1:1086997/1‑100 (MQ=255)
                                                          cGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCAGAtcggaaga                                           >  2:187150/1‑93 (MQ=255)
                                                          cGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGaaa                                           >  1:177379/1‑100 (MQ=255)
                                                           gCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAg                                          >  1:462192/1‑100 (MQ=255)
                                                           gCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAg                                          >  2:1378958/1‑100 (MQ=255)
                                                             tGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGAc                                        >  2:2819678/1‑100 (MQ=255)
                                                             tGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGAc                                        >  1:2338074/1‑100 (MQ=255)
                                                               aCCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACtt                                      <  1:2799451/100‑1 (MQ=255)
                                                               aCCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCCGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACtt                                      >  2:433151/1‑100 (MQ=255)
                                                                ccGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACttt                                     >  1:2720559/1‑100 (MQ=255)
                                                                ccGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACttt                                     >  2:2556656/1‑100 (MQ=255)
                                                                 cGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTa                                    <  1:3448481/100‑1 (MQ=255)
                                                                  gTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTAc                                   <  1:2180967/100‑1 (MQ=255)
                                                                  gTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTAc                                   <  1:2655327/100‑1 (MQ=255)
                                                                     ttCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCtt                                <  1:2672789/100‑1 (MQ=255)
                                                                      tCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTc                               >  1:209786/1‑100 (MQ=255)
                                                                      tCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTc                               >  1:3255980/1‑100 (MQ=255)
                                                                       cacaTCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTcc                              >  1:1554218/1‑100 (MQ=255)
                                                                       cacaTCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTcc                              >  2:168568/1‑100 (MQ=255)
                                                                        acaTCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCg                             >  2:3505575/1‑100 (MQ=255)
                                                                         caTCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGATGCCACTGCACATGGTGAAAGACTTTACCTTCCGc                            <  2:3550442/100‑1 (MQ=255)
                                                                         caTCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGCTTTCGTTGCGACTGCACCAGGTGAAAGACTTTACCTTCCGc                            >  2:2577118/1‑100 (MQ=255)
                                                                          aTCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGcc                           >  2:2191524/1‑100 (MQ=255)
                                                                           tctcGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCt                          <  1:2303557/100‑1 (MQ=255)
                                                                            ctcGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTg                         >  1:441505/1‑100 (MQ=255)
                                                                            ctcGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTg                         >  2:1439988/1‑100 (MQ=255)
                                                                            ctcGTTTCGGCAGTCCGCCGTTGCTCGCACGACTGATTTGCACGCGGCGCGCCAGTTTTTGTGGCCACTGCACATGGTGAACGACTTTACCTTCCGc                            <  2:28176/97‑1 (MQ=255)
                                                                             tcGTTTCGGCAGTCCGCCGTTGAAGGCACGACCGGTTTGCGGGCTGCGCGCAAGTTGGTGTTTCCACTGCACATAGAGGACGACAGTACCTTCCGCCTGc                        >  2:1156463/1‑100 (MQ=255)
                                                                               gTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCa                      <  2:868702/100‑1 (MQ=255)
                                                                                 cgatctaGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGt                    <  1:2811263/94‑1 (MQ=255)
                                                                                   cGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAg                  >  1:3770789/1‑100 (MQ=255)
                                                                                   cGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAg                  >  2:2687248/1‑100 (MQ=255)
                                                                                   cGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAg                  >  1:3642915/1‑100 (MQ=255)
                                                                                    ggCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTa                   >  2:1412707/1‑98 (MQ=255)
                                                                                    ggCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAgg                 <  1:1710148/100‑1 (MQ=255)
                                                                                     gCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGc                >  2:1589815/1‑100 (MQ=255)
                                                                                        gTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCaat             <  1:1955858/100‑1 (MQ=255)
                                                                                        atCCACCGTTGCTGGCACGACCGATTTGCAGGCTGCGCTCCAGTATTTATTGCCACTTCACATGACGAAATACTTTACCTTCCGCCTGCCAGTAGGCaa              >  2:559741/2‑99 (MQ=255)
                                                                                          ccgccgTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCATATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCaatga           <  2:2085072/100‑1 (MQ=255)
                                                                                          ccgccgTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCaatga           >  2:1560830/1‑100 (MQ=255)
                                                                                           cgccgTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCaatgaa          >  1:1602030/1‑100 (MQ=255)
                                                                                            gccgTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCaatgaat         <  2:637244/100‑1 (MQ=255)
                                                                                            gccgTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCaatgaat         >  1:3430093/1‑100 (MQ=255)
                                                                                             ccgTTGCTGGCACGATGGATTTGCTGGCTGCACGCCGGTTTTTGTTGCCCCTGCCCATGGTGAAAGACTTTTCCTTCCGCCTGCCAGTAGGCaatgaatg        <  2:3784070/100‑1 (MQ=255)
                                                                                               gTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCAATGAATGAg      <  1:822760/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
GTCGCCAACGTTTTTCATCGTTACCCTCTGAATCCTGGTGGAATTTGGCTGTCAGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCAATGAATGAGGCCA  >  NC_000913/4600958‑4601156

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.