New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4601057 =173 (1.270)9 (0.070) 8/168 NT 5.3% coding (461/540 nt) dnaT DNA biosynthesis protein (primosomal protein I)
?NC_000913 4601089 = 157 (1.220)coding (429/540 nt) dnaT DNA biosynthesis protein (primosomal protein I)
Rejected: Frequency below cutoff threshold.

Only 100 of 208 total aligned reads displayed.

CCTGGTGGAATTTGGCTGTCAGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCAATGAATGAGGCCAGTTCTTCGGTGGTCACCGGCTCTCTTAGCGCC  >  NC_000913/4600991‑4601188
                                                                                                  |                                                                                                   
 cTGGTGGAATTTGGCTGTCAGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGttt                                                                                                   >  2:2409767/1‑100 (MQ=255)
 cTGGTGGAATTTGGCTGTCAGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGttt                                                                                                   >  1:1846240/1‑100 (MQ=255)
  tggtggAATTTGGCTGTCAGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGtttt                                                                                                  >  2:754303/1‑100 (MQ=255)
  tggtggAATTTGGCTGTCAGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGtttt                                                                                                  >  1:832341/1‑100 (MQ=255)
  tggtggAATTTGGCTGTCAGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGtttt                                                                                                  >  1:1474880/1‑100 (MQ=255)
  tggtggAATTTGGCTGTCAGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGtt                                                                                                    >  2:1107429/1‑98 (MQ=255)
  ctcattcattgcctactggcaggcggaaggtaaagtctttcaccatgtgcagtggcaacaaaaaCTGGCACGACCGATTTGCAGGCTGCGCGCCAGtttt                                                                                                  >  1:504017‑M1/65‑100 (MQ=255)
    tcggAATTTGGCTGTCACGTTCTCTCGCCGTATTCACATCTCTTTTCGGCAGTCCTCCGTTGGTGGCACGACCGATTTGCAGGCCGCGCGCCAGtttt                                                                                                  <  2:2317512/96‑1 (MQ=255)
    gtggAATTTGGCTGTCAGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTttg                                                                                                <  2:1909327/100‑1 (MQ=255)
     tggAATTTGGCTGTCAGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTttgt                                                                                               >  1:851944/1‑100 (MQ=255)
      ggAATTTGGCTGTCAGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTttgt                                                                                               <  2:2817870/99‑1 (MQ=255)
       tcattgcctactggcaggcggaaggtaaagtctttcaccatgtgcagtggcaacaaaaaCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTttgttg                                                                                             >  1:753522‑M1/60‑100 (MQ=255)
       gAATTTGGCTGTCAGGTTCGCTGACCGTATTCACAGCTCGTTTCGGCAGTCCGCCGTTGTTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTttgttg                                                                                             <  2:1021511/100‑1 (MQ=255)
        aaTTTGGCTGTCAGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGc                                                                                            <  1:1040407/100‑1 (MQ=255)
        aaTTTGGCTGTCAGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGc                                                                                            >  2:2709432/1‑100 (MQ=255)
         attgcctactggcaggcggaaggtaaagtctttcaccatgtgcagtggcaacaaaaaCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGcc                                                                                           >  1:3753828‑M1/58‑100 (MQ=255)
         aTTTGGCTGTCAGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGcc                                                                                           <  1:2476290/100‑1 (MQ=255)
           ttGGCTGTCAGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCAc                                                                                         <  1:3032811/100‑1 (MQ=255)
           gtggctggcAGGTGCGCGGGCCGTATTCACAGCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGcc                                                                                           <  2:1302219/97‑1 (MQ=255)
            tGGCTGTCAGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACt                                                                                        >  1:1744377/1‑100 (MQ=255)
              gCTGTCAGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCAc                                                                                         <  2:1880555/97‑1 (MQ=255)
              gCTGTCAGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTg                                                                                       >  2:1266989/1‑99 (MQ=255)
              gCTGTCAGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGc                                                                                      >  1:1763913/1‑100 (MQ=255)
              gCTGTCAGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCACGCTGCGCGCCAGTTTTTGTTGCCACTGc                                                                                      <  2:1702252/100‑1 (MQ=255)
               cttccgatctCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGc                                                                                      <  1:187150/90‑1 (MQ=255)
                   cAGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACCGCACATg                                                                                 <  1:2004394/100‑1 (MQ=255)
                    aGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATgg                                                                                <  1:260906/100‑1 (MQ=255)
                    aGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATgg                                                                                <  1:2824927/100‑1 (MQ=255)
                     ggTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGt                                                                               <  2:2625105/100‑1 (MQ=255)
                     ggTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGt                                                                               <  1:1312269/100‑1 (MQ=255)
                      gTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTg                                                                              <  1:15342/100‑1 (MQ=255)
                       ttCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGa                                                                             <  2:2219573/100‑1 (MQ=255)
                       ttCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGa                                                                             <  2:3521781/100‑1 (MQ=255)
                        tCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGaa                                                                            >  1:1086997/1‑100 (MQ=255)
                          gCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAg                                                                          >  2:1378958/1‑100 (MQ=255)
                          gCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAg                                                                          >  1:462192/1‑100 (MQ=255)
                            tGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCCGGATGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGAc                                                                        >  2:1548638/1‑100 (MQ=255)
                            tGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGAc                                                                        >  1:2338074/1‑100 (MQ=255)
                              aCCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACtt                                                                      <  1:2799451/100‑1 (MQ=255)
                              aCCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACtt                                                                      >  1:1362608/1‑100 (MQ=255)
                              aCCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCCGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACtt                                                                      >  2:433151/1‑100 (MQ=255)
                               ccGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACttt                                                                     >  2:2556656/1‑100 (MQ=255)
                               ccGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACttt                                                                     >  1:2704060/1‑100 (MQ=255)
                                cGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTa                                                                    <  1:3448481/100‑1 (MQ=255)
                                 gTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTAc                                                                   <  1:2180967/100‑1 (MQ=255)
                                 gTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTAc                                                                   <  1:2655327/100‑1 (MQ=255)
                                    ttCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCtt                                                                >  2:1074039/1‑100 (MQ=255)
                                     tCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTc                                                               >  1:3255980/1‑100 (MQ=255)
                                     tCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTc                                                               >  1:209786/1‑100 (MQ=255)
                                      ctttcaccatgtgcagtggcaacaaaaactggcgcgcagcctgcaaatcggtcgtgccagTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTcc                                                              >  1:639659‑M2/61‑100 (MQ=255)
                                      cacaTCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTcc                                                              >  1:1554218/1‑100 (MQ=255)
                                       acaTCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCg                                                             >  2:3505575/1‑100 (MQ=255)
                                        caTCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGCTTTCGTTGCGACTGCACCAGGTGAAAGACTTTACCTTCCGc                                                            >  2:2577118/1‑100 (MQ=255)
                                         aTCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGcc                                                           >  2:2191524/1‑100 (MQ=255)
                                          tctcGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCt                                                          <  1:2303557/100‑1 (MQ=255)
                                          tctcGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCt                                                          >  1:2673736/1‑100 (MQ=255)
                                           ctcGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTg                                                         >  1:441505/1‑100 (MQ=255)
                                           ctcGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTg                                                         >  2:1439988/1‑100 (MQ=255)
                                             cGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGcc                                                       <  2:2825469/100‑1 (MQ=255)
                                              gTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGcc                                                       <  1:505148/99‑1 (MQ=255)
                                                cgatctaGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGt                                                    <  1:2811263/94‑1 (MQ=255)
                                                  cGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAg                                                  >  1:3770789/1‑100 (MQ=255)
                                                  cGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAg                                                  >  1:3642915/1‑100 (MQ=255)
                                                  cGGCAGTCCGCCGTTGATGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAg                                                  >  2:1802840/1‑100 (MQ=255)
                                                   ggCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAgg                                                 <  1:1710148/100‑1 (MQ=255)
                                                    gCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGc                                                >  2:1589815/1‑100 (MQ=255)
                                                       gTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCaat                                             <  1:2709969/100‑1 (MQ=255)
                                                       atCCACCGTTGCTGGCACGACCGATTTGCAGGCTGCGCTCCAGTATTTATTGCCACTTCACATGACGAAATACTTTACCTTCCGCCTGCCAGTAGGCaa                                              >  2:559741/2‑99 (MQ=255)
                                                         ccgccgTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCaatga                                           >  1:3394334/1‑100 (MQ=255)
                                                          aacaaaaactggcgcgcagcctgcaaatcggtcgtgccagTTTTTTTTTTCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCaatga                                           >  2:279616‑M2/41‑99 (MQ=255)
                                                           acaaaaactggcgcgcagcctgcaaatcggtcgtgccagTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCaatgaat                                         >  2:3455236‑M2/40‑100 (MQ=255)
                                                           acaaaaactggcgcgcagcctgcaaatcggtcgtgccagTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCaatgaat                                         >  2:3062318‑M2/40‑100 (MQ=255)
                                                            ccgTTGCTGGCACGATGGATTTGCTGGCTGCACGCCGGTTTTTGTTGCCCCTGCCCATGGTGAAAGACTTTTCCTTCCGCCTGCCAGTAGGCaatgaatg                                        <  2:3784070/100‑1 (MQ=255)
                                                            caaaaactggcgcgcagcctgcaaatcggtcgtgccagTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCaatgaat                                         >  1:887767‑M2/39‑99 (MQ=255)
                                                               ttGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCAATGAATGAgg                                     <  1:1411665/100‑1 (MQ=255)
                                                                tGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCAATGAATGAGGc                                    >  2:1666936/1‑100 (MQ=255)
                                                                  CTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCAATGAATGAGGCCa                                  <  2:657244‑M1/100‑1 (MQ=255)
                                                                    ggcgcgcagcctgcaaatcggtcgtgccagTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCAATGAATGAGGCCAGt                                >  1:627493‑M2/31‑100 (MQ=255)
                                                                    GGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCAATGAATGAGGCCAGt                                <  1:471203‑M1/100‑1 (MQ=255)
                                                                    GGCACGACCGATTTGCAGGCTGCGCGCAAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCAATGAATGAGGCCAGt                                <  1:81733‑M1/100‑1 (MQ=255)
                                                                     GCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCAATGAATGAGGCCAGtt                               >  2:1410999‑M1/1‑100 (MQ=255)
                                                                         gACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCAATGAATGAGGCCAGttcttc                           <  2:2789956/100‑1 (MQ=255)
                                                                         gACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCAATGAATGAGGCCAGttcttc                           <  2:56909/100‑1 (MQ=255)
                                                                         gACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCAATGAATGAGGCCAGttcttc                           >  2:1379933/1‑100 (MQ=255)
                                                                          aCCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCAATGAATGAGGCCAGTTCTTCg                          >  1:2132450/1‑100 (MQ=255)
                                                                           ccGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCAATGAATGAGGCCAGTTCTTCgg                         >  1:3301729/1‑100 (MQ=255)
                                                                           ccGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCAATGAATGAGGCCAGTTCTTCgg                         >  2:3362890/1‑100 (MQ=255)
                                                                            cGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCAATGAATGAGGCCAGTTCTTCggt                        <  1:677130/100‑1 (MQ=255)
                                                                            cGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCAATGAATGAGGCCAGTTCTTCggt                        >  2:3538270/1‑100 (MQ=255)
                                                                             gATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCAATGAATGAGGCCAGTTCTTCggtg                       >  2:2135504/1‑100 (MQ=255)
                                                                              aTTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCAATGAATGAGGCCAGTTCTTCggtgg                      <  2:3642888/100‑1 (MQ=255)
                                                                              aTTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCAATGAATGAGGCCAGTTCTTCggtgg                      <  1:1171705/100‑1 (MQ=255)
                                                                               tttGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCAATGAATGAGGCCAGTTCTTCggtggt                     >  1:2390315/1‑100 (MQ=255)
                                                                               tttGCAGGCTGCGCGCCAGTTTTCGGCGCCACTGCACGTGGTGAAAGACTTTCCCTTTCGCCTGCCAGTAGGCAATGAATGAGGCCAGTTCTTCggtgg                      <  2:2081943/99‑1 (MQ=255)
                                                                                   cAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCAATGAATGAGGCCAGTTCTTCGGTGGTCAcc                 <  1:2366889/100‑1 (MQ=255)
                                                                                    aGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCAATGAATGAGGCCAGTTCTTCGGTGGTCACCg                >  2:2811295/1‑100 (MQ=255)
                                                                                     ggCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCAATGAATGAGGCCAGTTCTTCGGTGGTCACCgg               >  2:1226251/1‑100 (MQ=255)
                                                                                             gccagTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCGGTAGGCAATGAATGAGCCCAGTTCTTCGGTGGTCACGGGCTCGCTTa       >  2:2834868‑M2/6‑100 (MQ=255)
                                                                                             gccagTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCAATGAATGAGGCCAGTTCTTCGGTGGTCACCGGCTCTCTTa       >  1:2737867‑M2/6‑100 (MQ=255)
                                                                                               cagTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCAATGAATGAGGCCAGTTCTTCGGTGGTCACCGGCTCTCTTAgc     <  1:1070564‑M2/97‑1 (MQ=255)
                                                                                                  |                                                                                                   
CCTGGTGGAATTTGGCTGTCAGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCAATGAATGAGGCCAGTTCTTCGGTGGTCACCGGCTCTCTTAGCGCC  >  NC_000913/4600991‑4601188

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.