New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4629147133 (0.970)14 (0.110) 7/168 NT 9.9% coding (1376/1668 nt) ettA energy‑dependent translational throttle A
?NC_000913 = 4629161 128 (0.990)coding (1362/1668 nt) ettA energy‑dependent translational throttle A
Rejected: Frequency below cutoff threshold.

Only 100 of 194 total aligned reads displayed.

CCGGGAACTCCAGCAGGGCGTTTTCCAGCGCGCGCAGGGTTTCGATATCCAGGTCGTTGGTTGGTTCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTTTAAAGTTAAAGCGGCCAACGTAGG  >  NC_000913/4629049‑4629246
                                                                                                  |                                                                                                   
     aaCTCCAGCAGGGCGTTTTCCAGCGCGCGCAGGGTTTCGATATCCAGGTCGTTGGTTGGTTCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCt                                                                                               <  1:3568896/100‑1 (MQ=255)
     aaCTCCAGCAGGGCGTTTTCCAGCGCGCGCAGGGTTTCGATATCCAGGTCGTTGGTTGGTTCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCt                                                                                               <  2:2087516/100‑1 (MQ=255)
      aCTCCAGCAGGGCGTTTTCCAGCGCGCGCAGGGTTTCGATATCCAGGTCGTTGGTTGGTTCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCtt                                                                                              >  2:1866082/1‑100 (MQ=255)
       cTCCAGCAGGGCGTTTTCCAGCGCGCGCAGGGTTTCGATATCCAGGTCGTTGGTTGGTTCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTc                                                                                             >  1:2853602/1‑100 (MQ=255)
       cTCCAGCAGGGCGTTTTCCAGCGCGCGCAGGGTTTCGATATCCAGGTCGTTGGTTGGTTCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTc                                                                                             >  1:3166857/1‑100 (MQ=255)
        tCCAGCAGGGCGTTTTCCAGCCCGCGCAGGGTTTCGATATCCAGGTCGTTGGGTCGTTCGGCCGCCAGCAGCATGTTCCCGCTAACCTGCAGCAGCCTc                                                                                             >  2:3631089/1‑99 (MQ=255)
           agcagGGCGTTTTCCAGCGCGCTCAGTGTTTCGGTATCCAGGTCGTTGGTGGGTTCGGCGAGCAGCAGCATGTTGCCGCCAATCTTCAGCAGGTTCGCCa                                                                                         <  2:1350950/100‑1 (MQ=25)
            gcagGGCGTTTTCCAGCGCGCGCAGGGTTTCGATATCCAGGTCGTTGGTTGGTTCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAg                                                                                        >  2:202035/1‑100 (MQ=255)
               gggCGTTTTCCAGCGCGCGCAGGGTTTCGATATCCAGGTCGTTGGTTGGTTCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGAtg                                                                                     >  2:2263828‑M2/1‑98 (MQ=255)
               gggCGTTTTCCAGCGCGCGCAGGGTTTCGATATCCAGGTCGTTGGTTGGTTCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGAtg                                                                                     <  1:1034241‑M2/100‑3 (MQ=255)
                 gCGTTTTCCAGCGCGCGCAGGGTTTCGATATCCAGGTCGTTGGTTGGTTCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGAtgca                                                                                   <  2:2269014‑M2/100‑5 (MQ=255)
                   gTTTTCCAGCGCGCGCAGGGTTTCGATATCCAGGTCGTTGGTTGGTTCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAtctggcgaagctgctgcagg                                                                                 <  2:1713898‑M1/100‑21 (MQ=255)
                   gTTTTCCAGCGCGCGCAGGGTTTCGATATCCAGGTCGTTGGTTGGTTCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAga                                                                                 >  1:1441218/1‑100 (MQ=255)
                   gTTTTCCAGCGCGCGCAGGGTTTCGATATCCAGGTCGTTGGTTGGTTCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAga                                                                                 <  1:1734545/100‑1 (MQ=255)
                    ttttCCAGCGCGCGCAGGGTTTCGATATCCAGGTCGTTGGTTGGTTCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAtctggcgaagctgctgcaggt                                                                                <  1:3568219‑M1/100‑22 (MQ=255)
                    ttttCCAGCGCGCGCAGGGTTTCGATATCCAGGTCGTTGGTTGGTTCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAtctggcgaagctgctgcaggt                                                                                <  1:3507548‑M1/100‑22 (MQ=255)
                    ttttCCAGCGCGCGCAGGGTTTCGATATCCAGGTCGTTGGTTGGTTCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAtctggcgaagctgctgcaggt                                                                                <  2:444391‑M1/100‑22 (MQ=255)
                    ttttCCAGCGCGCGCAGGGTTTCGATATCCAGGTCGTTGGTTGGTTCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAgac                                                                                <  2:349593/100‑1 (MQ=255)
                     tttCCAGCGCGCGCAGGGTTTCGATATCCAGGTCGTTGGTTGGTTCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAtctggcgaagctgctgcaggtt                                                                               <  1:1993264‑M1/100‑23 (MQ=255)
                     tttCCAGCGCGCGCAGGGTTTCGATATCCAGGTCGTTGGTTGGTTCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAtctggcgaagctgctgcaggtt                                                                               <  1:1993288‑M1/100‑23 (MQ=255)
                       tCCAGCGCGCGCAGGGTTTCGATATCCAGGTCGTTGGTTGGTTCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAtctggcgaagctgctgcaggttgg                                                                             <  1:955113‑M1/100‑25 (MQ=255)
                       tCCAGCGCGCGCAGGGTTTCGATATCCAGGTCGTTGGTTGGTTCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAgacgac                                                                             >  1:2008405/1‑100 (MQ=255)
                       tCCAGCGCGCGCAGGGTTTCGATATCCAGGTCGTTGGTTGGTTCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAgacgac                                                                             <  1:1866093/100‑1 (MQ=255)
                        ccAGCGCGCGCAGGGTTTCGATATCCAGGTCGTTGGTTGGTTCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGAcc                                                                            >  2:511101/1‑100 (MQ=255)
                        ccAGCGCGCGCAGGGTTTCGATATCCAGGTCGTTGGTTGGTTCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGAcc                                                                            >  1:891193/1‑100 (MQ=255)
                        ccAGCGCGCGCAGGGTTTCGATATCCAGGTCGTTGGTTGGTTCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGAcc                                                                            >  1:2021168/1‑100 (MQ=255)
                         cAGCGCGCGCAGGGTTTCGATATCCAGGTCGTTGGTTGGTTCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACcg                                                                           >  2:3528348/1‑100 (MQ=255)
                          aGCGCGCGCAGGGTTTCGATATCCAGGTCGTTGGTTGGTTCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAtctggtgaagctgctgcaggttggcgg                                                                          <  1:405033‑M1/100‑28 (MQ=255)
                           gcgcgcgtAGGGTTTCGATATCCAGGTCGTTGGTTGGTTCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACcgc                                                                          <  2:3173809/99‑1 (MQ=255)
                            cgcgcgcAGGGTTTCGATATCCAGGTCGTTGGTTGGTTCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCgcgc                                                                        >  1:1115601/1‑100 (MQ=255)
                             gcgcgcAGGGTTTCGATATCCAGGTCGTTGGTTGGTTCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCt                                                                       <  1:2195376/100‑1 (MQ=255)
                                cgcAGGGTTTCGATATCCAGGTCGTTGGTTGGTTCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTcac                                                                    >  2:126927/1‑100 (MQ=255)
                                 gcAGGGTTTCGATATCCAGGTCGTTGGTTGGTTCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTcacc                                                                   <  1:652325/100‑1 (MQ=255)
                                    gggTTTCGATATCCAGGTCGTTGGTTGGTTCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCaccacc                                                                >  2:288516/1‑100 (MQ=255)
                                    gggTTTCGATATCCAGGTCGTTGGTTGGTTCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCaccacc                                                                <  2:2547282/100‑1 (MQ=255)
                                    gggTTTCGATATCCAGGTCGTTGGTTGGTTCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCaccacc                                                                <  1:202035/100‑1 (MQ=255)
                                     ggTTTCGATAGCCAGGTCGTTGGTTGGTTCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCg                                                               <  1:1382409/100‑1 (MQ=255)
                                      gTTTCGATATCCAGGTCGTCGGTTGGTTCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCgg                                                              >  2:3508677/1‑100 (MQ=255)
                                           gATATCCAGGTCGTTGGTTGGTTCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGt                                                         <  2:1379319/100‑1 (MQ=255)
                                            atatCCAGGTCGTTGGTTGGTTCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGtt                                                        >  1:1202620/1‑100 (MQ=255)
                                             tatCCAGGTCGTTGGTTGGTTCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTc                                                       <  2:456122/100‑1 (MQ=255)
                                              atCCAGGTCGTTGGTTGGTTCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCa                                                      <  2:619427/100‑1 (MQ=255)
                                              atCCAGGTCGTTGGTTGGTTCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCa                                                      >  1:746486/1‑100 (MQ=255)
                                               tCCAGGTCGTTGGTTGGTTCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCAc                                                     <  2:1115592/100‑1 (MQ=255)
                                                ccAGGTCGTTGGTTGGTTCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCAcc                                                    <  2:1057932/100‑1 (MQ=255)
                                                caaGGTCGTTGGTTGGTTCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCAcc                                                    >  1:2584395/3‑100 (MQ=255)
                                                    gTCGTTGGTTGGTTCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCaag                                                 >  2:2312748/1‑98 (MQ=255)
                                                       gttggttgGTTCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGt                                             <  2:857144/100‑1 (MQ=255)
                                                         tggttggtTCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGttt                                           >  2:2411595/1‑100 (MQ=255)
                                                           gttggttCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTAc                                         <  2:2465751/100‑1 (MQ=255)
                                                           gttggttCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTAc                                         >  2:3131863/1‑100 (MQ=255)
                                                              ggttCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCt                                      >  1:2907064/1‑100 (MQ=255)
                                                              ggttCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATCCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCt                                      <  2:3757393/100‑1 (MQ=255)
                                                                ttCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGa                                    >  2:300680/1‑100 (MQ=255)
                                                                   gtcgAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATc                                  <  2:3033734/99‑1 (MQ=255)
                                                                   gtcgAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCa                                 >  2:1558233/1‑100 (MQ=255)
                                                                     cgAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGAtgcaggttggcggcaacatgctgctgctcgacgaaccaaccaacgacctggatatc                               <  1:228694‑M2/100‑57 (MQ=255)
                                                                     cgAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAAc                               <  1:2699786/100‑1 (MQ=255)
                                                                      gAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAAcc                              <  2:2302295/100‑1 (MQ=255)
                                                                       agcagcagcATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAAccc                             <  1:310443/100‑1 (MQ=255)
                                                                         ctgctgcaGGTTGGCGGCAACATGCTGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAAccc                             >  2:258137/6‑98 (MQ=37)
                                                                           gcagcaTGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCttt                         >  1:1829551/1‑100 (MQ=255)
                                                                             agcaTGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTttaa                       <  1:2986210/100‑1 (MQ=255)
                                                                               caTGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTttaaag                     <  2:1639355/100‑1 (MQ=255)
                                                                               caTGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTttaaag                     <  2:2153364/100‑1 (MQ=255)
                                                                               caTGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTttaaag                     <  2:1492579/100‑1 (MQ=255)
                                                                               caTGTTGCCACCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTttaaag                     <  1:2422091/100‑1 (MQ=255)
                                                                                aTGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCGCCGGAGAGTTCGCCAACGCGTTTACCCTGATCAACCCCTttaaagt                    >  2:2060293/1‑100 (MQ=255)
                                                                                  gTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTTACCAACGCGTTTACCCTGATCAACCCCTttaaagtta                  >  1:1350901/1‑100 (MQ=255)
                                                                                  gTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTttaaagtta                  >  1:424056/1‑100 (MQ=255)
                                                                                  gTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTttaaagtta                  >  1:3261487/1‑100 (MQ=255)
                                                                                   ttGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTttaaagttaa                 >  2:1952029/1‑100 (MQ=255)
                                                                                    tGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTttaaagttaaa                <  2:216991/100‑1 (MQ=255)
                                                                                    tGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTttaaagttaaa                >  2:2631144/1‑100 (MQ=255)
                                                                                        gccAACCTGCAGCAGCTTCGCCAGAtgcaggttggcggcaacatgctgctgctcgacgaaccaaccaacgacctggatatcgaaaccctgcgcgcgctgg            <  1:2226749‑M2/100‑76 (MQ=255)
                                                                                        gccAACCTGCAGCAGCTTCGCCAGAtgcaggttggcggcaacatgctgctgctcgacgaaccaaccaacgacctggatatcgaaaccctgcgcgcgctgg            <  1:2490460‑M2/100‑76 (MQ=255)
                                                                                        gccAACCTGCAGCAGCTTCGCCAGAtgcaggttggcggcaacatgctgctgctcgacgaaccaaccaacgacctggatatcgaaaccctgcgcgcgctg             <  1:1778130‑M2/99‑75 (MQ=255)
                                                                                         ccAACCTGCAGCAGCTTCGCCAGAtgcaggttggcggccacatgctgctgctcgacgaaccaaccaacgacctggatatcgaaaccctgcgcgcgctgg            <  2:2348427‑M2/99‑76 (MQ=255)
                                                                                         ccAACCTGCAGCAGCTTCGCCAGAtgcaggttggcggcaacatgctgctgctcgacgaaccaaccaacgacctggatatcgaaaccctgcgcgcgctgga           <  1:955113‑M2/100‑77 (MQ=255)
                                                                                         ccAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTTTAAAGTTAAAGCGGc           <  2:2728537/100‑1 (MQ=255)
                                                                                         ccAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTTTAAAGTTAAAGCGGc           >  1:3464924/1‑100 (MQ=255)
                                                                                         ccAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTTTAAAGTTAAAGCGGc           <  1:3770651/100‑1 (MQ=255)
                                                                                          cAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTTTAAAGTTAAAGCGGcc          <  1:334579/100‑1 (MQ=255)
                                                                                          cAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTTTAAAGTTAAAGCGGcc          <  2:3342228/100‑1 (MQ=255)
                                                                                          cAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTTTAAAGTTAAAGCGGcc          <  1:622607/100‑1 (MQ=255)
                                                                                            aCCTGCAGCAGCTTCGCCAGAtgcaggttggcggcaacatgctgctgctcgacgaaccaaccaacgacctggatatcgaaaccctgcgcgcgctggaaa         <  2:2914647‑M2/99‑79 (MQ=255)
                                                                                             ccTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCCCCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTTTAAAGTTAAAGCGGCCagc       <  2:2967006/100‑3 (MQ=255)
                                                                                              cTGCAtctggcgaagctgctgaaggttggcggcaacatgctgctgctcgacgaaccaaccaacgagctggatatcgaaaccctgcgcgggctggaaagc       >  2:1265238‑M1/1‑5 (MQ=255)
                                                                                               tGCAtctggcgaagctgctgcaggttggcggcaacatgctgctgctcgacgaaccaaccaacgacctggatatcgaaaccctgcgcgcgctggaaaacgc     >  1:3818609‑M1/1‑4 (MQ=255)
                                                                                               tGCAtctggcgaagctgctgcaggttggcggcaacatgctgctgctcgacgaaccaaccaacgacctggatatcgaaaccctgcgcgcgctggaaaacgc     >  1:1191203‑M1/1‑4 (MQ=255)
                                                                                               tGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTTTAAAGTTAAAGCGGCCAACGt     >  1:3071004/1‑100 (MQ=255)
                                                                                                gcagcaGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTTTAAAGTTAAAGCGGCCAACGTa    >  1:1674615/1‑100 (MQ=255)
                                                                                                gcagcaGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTTTAAAGTTAAAGCGGCCAACGTa    <  2:3758698/100‑1 (MQ=255)
                                                                                                gcagcaGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTTTAAAGTTAAAGCGGCCAACGTa    >  1:3534922/1‑100 (MQ=255)
                                                                                                gcagcaGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTTTAAAGTTAAAGCGGCCAACGTa    <  1:2483023/100‑1 (MQ=255)
                                                                                                gCAtctggcgaagctgctgcaggttggcggcaacatgctgctgctcgacgaaccaaccaacgacctggatatcgaaaccctgcgcgcgctggaaaacgcc    >  1:3438436‑M1/1‑3 (MQ=255)
                                                                                                gCAtctggcgaagctgctgcaggttggcggcaacatgctgctgctcgacgaaccaaccaacgacctggatatcgaaaccctgcgcgcgctggaaaacgcc    >  1:2865835‑M1/1‑3 (MQ=255)
                                                                                                gCAtctggcgaagctgctgcaggttggcggcaacatgctgctgctcgacgaaccaaccaacgacctggatatcgaaaccctgcgcgcgctggaaaacgcc    <  2:1455807‑M1/100‑98 (MQ=255)
                                                                                                 cAtctggcgaagctgctgcaggttggcggcaacatgctgctgctcgacgaaccaaccaacgacctggatatcgaaaccctgcgcgcgctggaaaacgccc   <  1:1034241‑M1/100‑99 (MQ=255)
                                                                                                 cAtctggcgaagctgatgcaggttggcggcaacatgctgctgctcgacgaaccaaccaacgacctggatatcgaaaccctgcgcgcgctggaaaacgccc   <  1:3758726‑M1/100‑99 (MQ=255)
                                                                                                  |                                                                                                   
CCGGGAACTCCAGCAGGGCGTTTTCCAGCGCGCGCAGGGTTTCGATATCCAGGTCGTTGGTTGGTTCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTTTAAAGTTAAAGCGGCCAACGTAGG  >  NC_000913/4629049‑4629246

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.