New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 349605 =NA (NA)17 (0.140) 7/164 NT NA noncoding (1/365 nt) REP25 (repetitive extragenic palindromic) element; contains 8 REP sequences REP25 (repetitive extragenic palindromic) element; contains 8 REP sequences
?NC_000913 349637 = NA (NA)noncoding (33/365 nt) REP25 (repetitive extragenic palindromic) element; contains 8 REP sequences REP25 (repetitive extragenic palindromic) element; contains 8 REP sequences

Only 100 of 219 total aligned reads displayed.

TCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGG  >  NC_000913/349538‑349736
                                                                                                   |                                                                                                   
 cGACAACCTGTTTGCACGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGcc                                                                                                     <  2:3141306/99‑1 (MQ=255)
  gACAACCTGTTTGGCCGTAGCCAGGTGAAATAAAAAACGCCCATTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTa                                                                                                   >  1:2583718/1‑100 (MQ=255)
  gACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTa                                                                                                   <  2:785531/100‑1 (MQ=255)
   aCAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTAc                                                                                                  <  1:1849429/100‑1 (MQ=255)
     aaCCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACg                                                                                                 >  2:105691/1‑99 (MQ=255)
      atcggttgtcggatgcgacgctatgcgtcttatccgacctacagttcagtgcaccccgtagGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTacggg                                                                                               >  2:987321‑M1/62‑98 (MQ=255)
      aCCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAg                                                                                               >  1:383362/1‑100 (MQ=255)
       ccTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAgg                                                                                              >  1:2103933/1‑100 (MQ=255)
       ccTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAgg                                                                                              <  1:1974066/100‑1 (MQ=255)
       ccTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAgg                                                                                              >  1:3270594/1‑100 (MQ=255)
       ccTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAgg                                                                                              <  2:1852591/100‑1 (MQ=255)
       ccTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAgg                                                                                              >  2:3710478/1‑100 (MQ=255)
              gCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTg                                                                                       >  2:195898/1‑100 (MQ=255)
              gCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTg                                                                                       <  1:2188384/100‑1 (MQ=255)
              gCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTg                                                                                       >  2:697006/1‑100 (MQ=255)
               cccGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGa                                                                                      >  2:1688224/1‑100 (MQ=255)
               cccGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGa                                                                                      >  1:69001/1‑100 (MQ=255)
                  gTAGCGAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGAGGCGAGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAAc                                                                                    <  2:289992/99‑1 (MQ=25)
                  gTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACt                                                                                   >  2:2586752/1‑100 (MQ=255)
                   tAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTg                                                                                  <  1:44185/100‑1 (MQ=255)
                     gCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTa                                                                                <  1:2397811/100‑1 (MQ=255)
                     gCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTa                                                                                <  1:747898/100‑1 (MQ=255)
                     gCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTa                                                                                >  1:2958720/1‑100 (MQ=255)
                     cgacgccatccgtcttatccgacctacagttcagtgcacctcgtagGCCTGATAAGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTa                                                                                >  1:1428546‑M1/47‑100 (MQ=255)
                      ccAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAg                                                                               <  1:1582424/100‑1 (MQ=255)
                       cAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGG                                                                              >  1:2645071‑M1/1‑100 (MQ=255)
                         ggTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTC                                                                            >  1:943656‑M1/1‑100 (MQ=255)
                          gTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCG                                                                           <  2:1325705‑M1/100‑1 (MQ=255)
                            gAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGA                                                                         <  2:493051‑M1/100‑1 (MQ=255)
                            gAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGAGGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGA                                                                         <  1:1594589‑M1/100‑1 (MQ=255)
                               aTAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACGTATCAGGCGTACGTGGTGCACTGAACGGTAGGTGGGAT                                                                        >  2:318034‑M1/1‑98 (MQ=255)
                                tAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAg                                                                     <  1:80507/100‑1 (MQ=255)
                                tAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAg                                                                     <  1:148566/100‑1 (MQ=255)
                                    aaaCGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACg                                                                  >  2:611256/1‑99 (MQ=255)
                                       cGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATg                                                              <  1:3611588/100‑1 (MQ=255)
                                        gCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATgg                                                             >  1:649234/1‑100 (MQ=255)
                                        gCCCGTTGATTGTATTCGACAGCCGATGCCGGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATgg                                                             <  2:2710385/100‑1 (MQ=255)
                                         cccGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGc                                                            >  2:3230986/1‑100 (MQ=255)
                                                   gTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCatccg                                                  >  1:105691‑M2/1‑95 (MQ=255)
                                                   gTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATgcgacgccatccgtcttatccg                                                  <  1:496782‑M1/100‑23 (MQ=255)
                                                     atccgacAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATgcgacgctatgcgtcttatccgac                                                <  2:1917888‑M1/97‑25 (MQ=255)
                                                     aTTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCatccgac                                                <  1:3569122‑M2/100‑8 (MQ=255)
                                                     aTTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCatccgac                                                >  2:1750130‑M2/1‑93 (MQ=255)
                                                     aTTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCatccgac                                                >  1:99854‑M2/1‑93 (MQ=255)
                                                      tccgaCAGCCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATgcgacgctatgcgtcttatccgacc                                               <  2:255139‑M1/98‑26 (MQ=255)
                                                       tCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATgcgacgccatccgtcttatccgacct                                              <  2:2798787‑M1/100‑27 (MQ=255)
                                                       tCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACaa                                              <  2:41813/100‑1 (MQ=255)
                                                       tCGACAGACGATGCCTGATGCGTCGCTGACGCGACTTATCAGACCTACGAGGTGCACTAAACTATAGGTCGGATgcgacgccatccgtcttatccgacc                                               <  2:3103292‑M1/99‑26 (MQ=255)
                                                        cGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATgcgacgccatccgtcttatccgaccta                                             <  2:1604765‑M1/100‑28 (MQ=255)
                                                        cGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAAc                                             >  1:3427627/1‑100 (MQ=255)
                                                         gACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGGCAAcc                                            <  2:3318440/100‑1 (MQ=255)
                                                         gACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAAcc                                            >  1:3666139/1‑100 (MQ=255)
                                                         gACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAAcc                                            <  1:2909237/100‑1 (MQ=255)
                                                         gACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAAcc                                            <  2:2365311/100‑1 (MQ=255)
                                                         gACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATgcgacgctatgcgtcttatccgacctac                                            <  2:3601951‑M1/100‑29 (MQ=255)
                                                             gCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATg                                        >  1:3522576/1‑100 (MQ=255)
                                                             gCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATg                                        >  1:3705805/1‑100 (MQ=255)
                                                             gCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACCg                                           >  2:2608559/1‑97 (MQ=9)
                                                               cGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGcc                                      <  1:2258055/100‑1 (MQ=255)
                                                                  tGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGa                                   >  1:1081719/1‑100 (MQ=255)
                                                                  tGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGa                                   <  1:3393516/100‑1 (MQ=255)
                                                                  ggcctgataagtcgcgtcagcgacgcatcaggcCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGa                                   >  1:945275‑M2/34‑100 (MQ=255)
                                                                   gcctgataagtcgcgtcagcgacgcatcaggcCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGAt                                  >  1:661809‑M2/33‑100 (MQ=255)
                                                                   gcctgataagtcgcgtcagcgacgcatcaggcCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGAt                                  >  1:2310329‑M2/33‑100 (MQ=255)
                                                                   GCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGAt                                  >  2:3405766‑M1/1‑100 (MQ=255)
                                                                    cctgataagtcgcgtcagcgacgcatcaggcCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATg                                 >  1:2050752‑M2/32‑100 (MQ=255)
                                                                     CTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATgc                                <  1:1693945‑M1/100‑1 (MQ=255)
                                                                      tgataagtcgcgtcagcgacgcatcaggcCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATgcg                               >  2:217047‑M2/30‑100 (MQ=255)
                                                                      TGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATgcg                               <  1:1370306‑M1/100‑1 (MQ=255)
                                                                      TGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCGGATgcg                               >  2:120597‑M1/1‑100 (MQ=255)
                                                                      TGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGCATGGCGTCGCATCCGACAACCGATGCCTGATgcg                               <  2:2349387‑M1/100‑1 (MQ=255)
                                                                      TGATGCGCCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATgcg                               <  1:3288075‑M1/100‑1 (MQ=255)
                                                                       gataagtcgcgtcagcgacttatcaggcCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATg                                 >  2:2663918‑M2/29‑97 (MQ=255)
                                                                       GATGGGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACGGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATgc                                >  2:3301787‑M1/1‑98 (MQ=255)
                                                                       GATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATAGCGTCGCATCCGACAACCGATGCCTGATgcgc                              <  1:143625‑M1/100‑1 (MQ=255)
                                                                            gTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTg                         <  1:1303648/100‑1 (MQ=255)
                                                                            gTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTg                         >  1:524822/1‑100 (MQ=255)
                                                                             ccgCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATgcgacgctatgcgtcttatccgacctacagttcagtgcaccccgtagg                        <  1:307576‑M1/99‑49 (MQ=255)
                                                                               gCTGACGCGACTTATCAGGCCTACGAGGTGCACTGATCTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACg                      <  2:2103920/100‑1 (MQ=255)
                                                                               gCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACg                      <  2:3490122/100‑1 (MQ=255)
                                                                                   aCGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGAc                  >  1:2811484/1‑100 (MQ=255)
                                                                                   aCGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGAc                  <  2:148817/100‑1 (MQ=255)
                                                                                   aCGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGAc                  <  1:3736139/100‑1 (MQ=255)
                                                                                    cgcgACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACt                 <  1:355837/100‑1 (MQ=255)
                                                                                    cgcgACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACt                 >  1:1202561/1‑100 (MQ=255)
                                                                                    cgcgACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACt                 >  1:31830/1‑100 (MQ=255)
                                                                                    cgcgACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACt                 >  2:1262187/1‑100 (MQ=38)
                                                                                      ngACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTa               >  2:1025754/2‑100 (MQ=255)
                                                                                      cgACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTa               >  2:2865774/1‑100 (MQ=38)
                                                                                         cTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCa            >  1:3092985/1‑100 (MQ=255)
                                                                                         cTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTAtga            >  1:152420/1‑98 (MQ=255)
                                                                                          ttATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAg           <  1:614726/100‑1 (MQ=255)
                                                                                           tATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCatccgacctacagttcagtgcaccccgtaggcctgataagtcgcg          <  1:2599072‑M2/100‑46 (MQ=255)
                                                                                           tATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATACGATGCGTGGCGACGCATCCGGCAACCGATGCCTGATGCGCCGCTGAcaggacgta               >  2:411285/1‑87 (MQ=11)
                                                                                           tATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAgg          >  2:307574/1‑100 (MQ=255)
                                                                                           tATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAg           >  2:1829246/1‑99 (MQ=255)
                                                                                            atcaggcCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGCATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGc         >  2:1546169‑M2/8‑100 (MQ=255)
                                                                                             tcaggcCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGcc        >  1:2944531‑M2/7‑100 (MQ=255)
                                                                                                ggcCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTAc     >  1:1943839‑M2/4‑100 (MQ=255)
                                                                                                  cCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACg    >  1:1806271‑M2/2‑99 (MQ=255)
                                                                                                   |                                                                                                   
TCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGG  >  NC_000913/349538‑349736

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.