| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3895222 = | 90 (0.960) | 23 (0.280) | 13/154 | NT | 22.9% | intergenic (+4/+50) | chrR/adeP | chromate reductase, Class I, flavoprotein/adenine permease, high affinity; adenine:H+ symporter |
| ? | NC_000913 | 3895257 = | 77 (0.950) | intergenic (+39/+15) | chrR/adeP | chromate reductase, Class I, flavoprotein/adenine permease, high affinity; adenine:H+ symporter | |||||
GCGTAATCATCGTTGCGCTGCTGTTTATCCTGAAGATTGTCTTTATCGACGCTCACTAAAATCGATAGCGCGTTAAAAACCCGCCATGCATGATTGCTGGCGGGTTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3895330‑3895222‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcgggtttttAACGCGCTATCGATTTTAGTGAGCGTCGATAAAGACAATCTTCAGGATAAACAGCAGCGCAACGATGATTACGCACGGGCTTAGATCACGCAGACGTCC > NC_000913/3895257‑3895355 GCGTAATCATCGTTGCGCTGCTGTTTATCCTGAAGATTGTCTTTATCGACGCTCACTAAAATCGATAGCGCGTTAAAAACCCGCCATGCATGATTGCTGG < 1:2352187/100‑1 AATCATCGTTGCGCTGCTGTTTATCCTGAAGATTGTCTTTATCGACGCTCACTAAAATCGATAGCGCGTTAAAAACCCGCCATGCATGATTGCTGGCGGn < 2:2581677/100‑2 AATCATCGTTGCGCTGCTGTTTATCCTGAAGATTGTCTTTATCGACGCTCACTAAAATCGATAGCGCGTTAAAAACCCGCCATGCATGATTGCTGGCGGG > 2:1328709/1‑100 ATCATCGTTGCGCTGCTGTTTATCCTGAAGATTGTCTTTATCGACGCTCACTAAAATCGATAGCGCGTTAAAAACCCGCCATGCATGATTGCTGGCGGGT > 1:1099265/1‑100 TCATCGTTGCGCTGCTGTTTATCCTGAAGATTGTCTTTATCGACGCTCACTAAAATCGATAGCGCGTTAAAAACCCGCCATGCATGATTGCTGGCGGGTT < 1:265012/100‑1 CATCGTTGCGCTGCTGTTTATCCTGAAGATTGTCTTTATCGACGCTCACTAAACTCGATAGCGCGTTAAAAACCCGCCATGCATGATTGCTGGCGGGTTT < 2:216029/100‑1 CATCGTTGCGCTGCTGTTTATCCTGAAGATTGTCTTTATCGACGCTCACTAAAATCGATAGCGCGTTAAAAACCCGCCATGCATGATTGCTGGCGGGTTT < 2:2247443/100‑1 CATCGTTGCGCTGCTGTTTATCCTGAAGATTGTCTTTATCGACGCTCACTAAAATCGATAGCGCGTTAAAAACCCGCCATGCATGATTGCTGGCGGGTTT < 2:1704313/100‑1 CATCGTTGCGCTGCTGTTTATCCTGAAGATTGTCTTTATCAACGCTCACTAAAATCGATAGCGCGTTCAAAACCCGCCATGCATGATTGCTGGCGGGTT > 2:420624/1‑99 ATCGTTGCGCTGCTGTTTATCCTGAAGATTGTCTTTATCGACGCTCACTAAAATCGATAGCGCGTTAAAAACCCGCCATGCATGATTGCTGGCGGGTTTT < 2:568400/100‑1 TCGTTGCGCTGCTGTTTATCCTGAAGATTGTCTTTATCGACGCTCACTAAAATCGATAGCGCGTTAAAAACCCGCCATGCATGATTGCTGGCGGGTTTTT < 1:1126116/100‑1 CTGAAGATTGTCTTTATCGACGCTCACTAAAATCGATAGCGCGTTAAAAACCCGCCATGCATGATTGCTGGCGGGTTTTTAACGCGCTATCGATTTTAGT > 1:1343444/1‑100 GATTGTCTTTATTGACGCTTACTAAAATCGATAGCGCGTTAAAAATCCGCCATGCATGATTGCTGGCGGGTTTTTAACGCGCTATCGATTTTAGTGAGCG < 1:640979/100‑1 GACGCTCACTAAAATCGATAGCGCGTTAAAAACCCGCCATGCATGATTGCTGGCGGGTTTTTAACGCGCTATCGATTTTAGTGAGCGTCGATAAAGACAA > 1:645570/1‑100 AAAAACCCGCCATGCATGATTGCTGGCGGGTTTTTAACGCGCTATCGATTTTAGTGAGCGTCGATAAAGACAATCTTCAGGATAAACAGCAGCGCAACGA > 1:1092373/1‑100 AAAACCCGCCATGCATGATTGCTGGCGGGTTTTTAACGCGCTATCGATTTTAGTGAGCGGCGATAAAGACAATCTTCAGGATAAACAGCAGCGCAACGAT > 1:116687/1‑100 AAACCCGCCATGCATGATTGCTGGCGGGTTTTTAACGCGCTATCGATTTTAGTGAGCGTCGATAAAGACAATCTTCAGGATAAACAGCAGCGCAACGAT > 1:730732/1‑99 AACCCGCCATGCATGATTGCTGGCGGGTTTTTAACGCGCTATCGATTTTAGTGAGCGTCGATAAAGACAATCTTCAGGATAAACAGCAGCGCAACGATGA > 1:2415984/1‑100 ACCCGCCATGCATGATTGCTGGCGGGTTTTTAACGCGCTATCGATTTTAGTGAGCGTCGATAAAGACAATCTTCAGGATAAACAGCAGCGCAACGATGAT > 2:911922/1‑100 ACCCGCCATGCATGATTGCTGGCGGGTTTTTAACGCGCTATCGATTTTAGTGAGCGTCGATAAAGACAATCTTCAGGATAAACAGCAGCGCAACGATGAT > 1:2149470/1‑100 CCCGCCATGCATGATTGCTGGCGGGTTTTTAACGCGCTATCGATTTTAGTGAGCGTCGTTAAAGACAATCTTCAGGATAAACAGCCGCGCAACGATGATT > 2:304549/1‑100 CCCGCCATGCATGATTGCTGGCGGGTTTTTAACGCGCTATCGATTTTAGTGAGCGTCGATCAAGGCAATCTTCAGGATAAACAGCAGCGCAACGATCATT > 2:404154/1‑100 CCCGCCATGCATGATTGCTGGCGGGTTTTTAACGCGCTATCGATTTTAGTGAGCGTCGATAAAGACAATCTTCAGGATAAACAGCAGCGCAACGATGATT > 1:113965/1‑100 CCCGCCATGCATGATTGCTGGCGGGTTTTTAACGCGCTATCGATTTTAGTGAGCGTCGATAAAGACAATCTTCAGGATAAACAGCAGCGCAACGATGATT > 2:172222/1‑100 CCCGCCATGCATGATTGCTGGCGGGTTTTTAACGCGCTATCGATTTTAGTGAGCGTCGATAAAGACAATCTTCAGGATAAACAGCAGCGCAACGATGATT > 1:2260863/1‑100 CCCGCCATGCATGATTGCTGGCGGGTTTTTAACGCGCTATCGATTTTAGTGAGCGTCGATAAAGACAATCTTCAGGATAAACAGCAGCGCAACGATGATT > 2:1382077/1‑100 CCCGCCATGCATGATTGCTGGCGGGTTTTTAACGCGCTATCGATTTTAGTGAGCGTCGATAAAGACAATCTTCAGGATAAACAGCAGCGCAACGATGATT > 1:2235363/1‑100 CCCGCCATGCATGATTGCTGGCGGGTTTTTAACGCGCTATCGATTTTAGTGAGCGTCGATAAAGACAATCTTCAGGATAAACAGCAGCGCAACGATGA > 2:1642145/1‑98 CCCGCCATGCATGATTGCTGGCGGGTTTTTAACGCGCTATCGATTTTAGTCAGCGTCGATAAAGACAATCTTCAGGATAAACAGCAGCGCAACGATAATT > 2:1791788/1‑100 CCGCCATGCATGATTGCTGGCGGGTTTTTAACGCGCTATCGATTTTAGTGAGCGTCGATAAAGACAATCTTCAGGATAAACAGCAGCGCAACGATGATTA > 2:1110206/1‑100 CGCCATGCATGATTGCTGGCGGGTTTTTAACGCGCTATCGATTTTAGTGAGCGTCGATAAAGACAATCTTCAGGATAAACAGCAGCGCAACGATGATTAC > 2:1626258/1‑100 ATGATTGCTGGCGGGTTTTTAACGCGCTATCGATTTTAGTGAGCGTCGATAAAGACAATCTTCAGGATAAACAGCAGCGCAACGATGATTACGCACGGGC > 2:1261396/1‑100 TGATTGCTGGCGGGTTTTTAACGCGCTATCGATTTTAGTGAGCGTCGATAAAGACAATCTTCAGGATAAACAGCAGCGCAACGATGATTACGCACGGGCT > 1:2111794/1‑100 TGATTGCTGGCGGGTTTTTAACGCGCTATCGATTTTAGTGAGCGTCGATAAAGACAATCTTCAGGATAAACAGCAGCGCAACGATGATTACGCACGGGCT > 1:1841550/1‑100 GGCGGGTTTTTAACGCGCTATCGATTTTAGTGAGCGTCGATAAAGACAATCTTCAGGATAAACAGCAGCGCAACGATGATTACGCACGGGCTTAGATCAC > 1:1735870/1‑100 GGCGGGTTTTTAACGCGCTATCGATTTTAGTGAGCGTCGATAAAGACAATCTTCAGGATAAACAGCAGCGCAACGATGATTACGCACGGGCTTAGATCAC > 1:621792/1‑100 GCGGGTTTTTAACGCGCTATCGATTTTAGTGAGTGTCGATAAAGACAATCTTCAGGATAAACAGCAGCGCTACGATGATTACGCACGGGCTTAGATCACG > 2:1570487/1‑100 CGGGTTTTTAACGCGCTATCGATTTTAGTGAGCGTCGCTAAAGACAATCTTCAGGATAAACAGCAGCGCAACGATGATTACGCACGGGCTTAGATCACGC < 2:2213852/100‑1 CGGGTTTTTAACGCGCTATCGATTTTAGTGAGCGTCGATAAAGACAATCTTCAGGATAAACAGCAGCGCAACGATGATTACGCACGGGCTTAGATCACGC < 2:2041949/100‑1 CGGGTTTTTAACGCGCTATCGATTTTAGTGAGCGTCGATAAAGACAATCTTCAGGATAAACAGCAGCGCAACGATGATTACGCACGGGCTTAGATCACGC > 1:581530/1‑100 CGGGTTTTTAACGCGCTATCGATTTTAGTGAGCGTCGATAAAGACAATCTTCAGGATAAACAGCAGCGCAACGATGATTACGCACGGGCTTAGATCACGC < 1:2586279/100‑1 GGGTTTTTAACGCGCTATCGATTTTAGTGAGCGTCGATAAAGACAATCTTCAGGATAAACAGCAGCGCAACGATGATTACGCACGGGCTTAGATCACGCn < 1:1017205/100‑2 GGTTTTTAACGCGCTATCGAGTTTAGTGAGCGTCGATAAAGACAATCTTCAGGATAAACAGCAGCGCAACGATGATTACGCACGGGCTTAGATCACGCAG > 2:1589662/1‑100 GTTTTTAACGCGCTATCGATTTTAGTGAGCGTCGATAAAGACAATCTTCAGGATAAACAGCAGCGCAACGATGATTACGCACGGGCTTAGATCACGCAGA > 1:912468/1‑100 GTTTTTAACGCGCTATCGATTTTAGTGAGCGTCGATAAAGACAATCTTCAGGATAAACAGCAGCGCAACGATGATTACGCACGGGCTTAGATCACGCAGA < 1:751026/100‑1 GTTTTTAACGCGCTATCGATTTTAGTGAGCGTCGATAAAGACAATCTTCAGGATAAACAGCAGCGCAACGATGATTACGCACGGGCTTAGATCACGCAGA > 2:341939/1‑100 GTTTTTAACGCGCTATCGATTTTAGTGAGCGTCGATAAAGACAATCTTCAGGATAAACAGCAGCGCAACGATGATTACGCACGGGCTTAGATCACGCAGA < 2:391502/100‑1 TTTTAACGCGCTATCGATTTTAGTGAGCGTCGATAAAGACAATCTTCAGGATAAACAGCAGCGCAACGATGATTACGCACGGGCTTAGATCACGCAGACG < 2:2235350/100‑1 TTTTAACGCGCTATCGATTTTAGTGAGCGTCGATAAAGACAATCTTCAGGATAAACAGCAGCGCAACGATGATTACGCACGGGCTTAGATCACGCAGACG < 1:1851306/100‑1 TTTAACGCGCTATCGATTTTAGTGAGCGTCGATAAAGACAATCTTCAGGATAAACAGCAGCGCAACGATGATTACGCACGGGCTTAGATCACGCAGACGT > 2:1302025/1‑100 TTTAACGCGCTATCGATTTTAGTGAGCGTCGATAAAGACAATCTTCAGGATAAACAGCAGCGCAACGATGATTACGCACGGGCTTAGATCACGCAGACGT > 1:622721/1‑100 TAACGCGCTATCGATTTTAGTGAGCGTCGATAAAGACAATCTTCAGGATAAACAGCAGCGCAACGATGATTACGCACGGGCTTAGATCACGCAGACGTCC < 1:2594649/100‑1 TAACGCGCTATCGATTTTAGTGAGCGTCGATAAAGACAATCTTCAGGATAAACAGCAGCGCAACGATGATTACGCACGGGCTTAAATCACGCAGACGTCC > 1:2562582/1‑100 GCGTAATCATCGTTGCGCTGCTGTTTATCCTGAAGATTGTCTTTATCGACGCTCACTAAAATCGATAGCGCGTTAAAAACCCGCCATGCATGATTGCTGGCGGGTTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3895330‑3895222‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcgggtttttAACGCGCTATCGATTTTAGTGAGCGTCGATAAAGACAATCTTCAGGATAAACAGCAGCGCAACGATGATTACGCACGGGCTTAGATCACGCAGACGTCC > NC_000913/3895257‑3895355 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |