New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 41716250 (0.000)53 (0.610) 13/166 NT 100% intergenic (+81/‑12) rrlB/rrfB 23S ribosomal RNA of rrnB operon/5S ribosomal RNA of rrnB operon
?NC_000913 = 4213004 NA (NA)intergenic (+58/‑36) rrlE/rrfE 23S ribosomal RNA of rrnE operon/5S ribosomal RNA of rrnE operon

TAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/4171521‑4171625
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tctgatTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAACG  <  NC_000913/4213004‑4212905
                                                                                                                                                                                                              
TAATGAACCGTGAGGCGTAACCTTACAACGCCGAAGCTGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCGTGATACAGATTAAATCAGAACGCAGAAGCGGT                                                                                                           >  2:387092/1‑100
 AATGAACCGTGAGGGTTAACCTTACAACGCCAAAGCTGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTC                                                                                                          <  2:2278537/100‑1
 AATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGC‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTC                                                                                                          >  2:2592413/1‑100
 AATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTC                                                                                                          <  1:2204298/100‑1
 AATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTC                                                                                                          <  2:1672357/100‑1
 AATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTC                                                                                                          <  1:738663/100‑1
 AATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTC                                                                                                          <  2:165180/100‑1
 AATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGT                                                                                                           >  1:847355/1‑99
 AATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTCTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTC                                                                                                          >  2:1385330/1‑100
  ATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCT                                                                                                         <  1:13358/100‑1
  ATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCT                                                                                                         <  1:1355808/100‑1
  ATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCT                                                                                                         <  1:1288916/100‑1
  ATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCT                                                                                                         >  1:1267295/1‑100
   TGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTG                                                                                                        <  2:139160/100‑1
   TGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTG                                                                                                        >  2:149097/1‑100
   TGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTG                                                                                                        >  1:1148380/1‑100
   TGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTG                                                                                                        <  2:2469299/100‑1
   TGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCT                                                                                                         >  1:245283/1‑99
    GAACCGTGAGGCTTAACCTTACAATGCCGAAGCTGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGA                                                                                                       <  1:2507244/100‑1
    GAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTTATACAGATTAAATCAGAACGCAGAAGCGGTCTGA                                                                                                       >  2:215952/1‑100
    GAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGA                                                                                                       >  2:212458/1‑100
    GAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGA                                                                                                       >  1:1542735/1‑100
     AACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGAT                                                                                                      <  1:508213/100‑1
     AACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGAT                                                                                                      <  2:39407/100‑1
     AACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGAT                                                                                                      <  1:251057/100‑1
                            CGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAA                                                                                >  1:2431434/1‑100
                                      GTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACTGATTAAATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCCGAAAATCTGCTCTC                                                                       >  2:1046540/1‑98
                                                                  GCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAA                                          >  1:149069/1‑100
                                                                    cttccgatctTTAAATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGG                                        <  1:52969/90‑1
                                                                    CTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACAGCTTCGGCGTTGTAAGG                                        >  2:1325458/1‑100
                                                                         ACAGATTAAATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAG                                   <  2:149068/100‑1
                                                                          nAGATTAAATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑ATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCC                                 >  2:167138/2‑100
                                                                          CAGATTAAATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGC                                  >  1:1006302/1‑100
                                                                           AGATTAAATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCC                                 >  1:350866/1‑100
                                                                           AGATTAAATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑ATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCT                                >  2:1270856/1‑100
                                                                           AGATTAAATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑ATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCT                                >  2:43434/1‑100
                                                                            GATTAAATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCT                                >  1:2002243/1‑100
                                                                            GATTAAATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCT                                >  2:27603/1‑100
                                                                            GATTAAATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCT                                >  2:94986/1‑100
                                                                             ATTAAATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTC                               >  2:2475648/1‑100
                                                                             ATTAAATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑ATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCA                              >  1:2587494/1‑100
                                                                              TTAAATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCA                              >  1:126136/1‑100
                                                                              TTAAATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGagatcggaag                              >  2:52969/1‑90
                                                                              TTAAATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCA                              >  1:967892/1‑100
                                                                              TTAAATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑ATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCAC                             >  1:1855889/1‑100
                                                                              TTAAATCAGAACGCAGAAGCAGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑ATCCGCCAAAACATCTTCGGCGTTGTAAGGTTAAGCCTCAC                             >  2:1590582/1‑100
                                                                               nAAATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCAC                             >  2:2075219/2‑100
                                                                               TAAATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑ATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACG                            >  1:1091965/1‑100
                                                                                AAATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACG                            >  1:1449987/1‑100
                                                                                AAATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACG                            >  1:50584/1‑100
                                                                                AAATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACG                            >  1:1420216/1‑100
                                                                                AAATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACG                            >  1:1989721/1‑100
                                                                                AAATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑ATCCGCCAAAACATCTTCGGCGTTGTAAGGTTAAGCCTCACGG                           >  2:2072060/1‑100
                                                                                AAATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑ATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGG                           >  2:2035874/1‑100
                                                                                AAATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑ATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGG                           >  2:1142935/1‑100
                                                                                AAATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑ATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGG                           >  1:1141353/1‑100
                                                                                AAATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑ATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGG                           >  1:1786369/1‑100
                                                                                 AATCAGACCGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑ATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGT                          >  1:1365826/1‑100
                                                                                 AATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCACTCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGG                           >  2:1832208/1‑100
                                                                                 AATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGG                           >  1:76461/1‑100
                                                                                 AATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGG                           >  1:426208/1‑100
                                                                                 AATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGG                           >  2:2271442/1‑100
                                                                                 AATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACGG                           >  1:791275/1‑100
                                                                                 AATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACGG                           >  2:852072/1‑100
                                                                                 AATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACGG                           >  1:2058337/1‑100
                                                                                 AATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACGG                           >  1:1090517/1‑100
                                                                                 AATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑ATCCGCCAAAACATCTTCGGCGTTGTAAGGTTAAGCCTCACGGT                          >  1:635570/1‑100
                                                                                 AATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑ATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGT                          >  1:1047192/1‑100
                                                                                 AATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑ATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGT                          >  2:201939/1‑100
                                                                                 AATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑ATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGG                           >  2:2602272/1‑99
                                                                                  nTCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑ATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTT                         >  2:308458/2‑100
                                                                                  ATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTTTCTAAATCCGCCAAAACACGTTCGACGTTGTAAGGTTAAGCCTCACGGT                          >  2:73041/1‑100
                                                                                  ATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGT                          >  1:2231858/1‑100
                                                                                  ATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACGGT                          >  2:940021/1‑100
                                                                                  ATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑ATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTT                         >  1:1906048/1‑100
                                                                                  ATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑ATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTT                         >  2:372998/1‑100
                                                                                   TCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACGGTT                         >  1:740702/1‑100
                                                                                     AGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCA                       <  1:940026/100‑1
                                                                                                    TCTGATTTAATCTGTATCAGGCTGAACATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGC        >  1:1585038/1‑100
                                                                                                    TCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGC        <  1:1117546/100‑1
                                                                                                    TCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGC        <  2:87787/100‑1
                                                                                                    TCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGC        <  1:1480935/100‑1
                                                                                                    TCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGC        <  1:1691904/100‑1
                                                                                                    TCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGC        <  1:838744/100‑1
                                                                                                    TCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGC        <  2:219844/100‑1
                                                                                                     CTGATTTAATCTGTATCAGGCCGAAAATCGTCTCCCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTAATTAGTACCGGTTAGC        <  2:213297/99‑1
                                                                                                      TGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTC      >  2:625343/1‑100
                                                                                                      TGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTC      >  2:1220491/1‑100
                                                                                                      TGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTC      <  1:1173446/100‑1
                                                                                                       GATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAATCACCGTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCA     <  2:637025/100‑1
                                                                                                       GATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCA     >  2:490682/1‑100
                                                                                                        ATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAA    >  1:440049/1‑100
                                                                                                        ATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAA    <  2:901111/100‑1
                                                                                                        ATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCT       <  2:1376222/97‑1
                                                                                                        ATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCC‑AAACACCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAAC   >  1:2523468/1‑100
                                                                                                         TTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAAC   >  2:1674959/1‑100
                                                                                                         TTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCC‑AAACACCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAACG  <  2:2523455/100‑1
                                                                                                                                                                                                              
TAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/4171521‑4171625
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tctgatTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAACG  <  NC_000913/4213004‑4212905

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.