New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4515778107 (1.140)8 (0.090) 6/166 NT 7.5% coding (900/2325 nt) fecA TonB‑dependent outer membrane ferric citrate transporter and signal transducer; ferric citrate extracelluar receptor; FecR‑interacting protein
?NC_000913 = 4515794 99 (1.130)coding (884/2325 nt) fecA TonB‑dependent outer membrane ferric citrate transporter and signal transducer; ferric citrate extracelluar receptor; FecR‑interacting protein
Rejected: Frequency below cutoff threshold.

TGCAGCAGGCTGTTGAAGGTGTGCACCTCATCCGGCGCATATTTGCTTTTCAGCATCAGGTCGTCGATGCGGGTGGCGCTGTGCTCGCGCCAGTCACTGCCGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/4515674‑4515778
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcgcTGCTCTACTCCGGCACGCGCGGCAGTGACTGGCGCGAGCACAGCGCCACCCGCATCGACGACCTGATGCTGAAAAGCAAATATGCGCCGGATGAGGTG  <  NC_000913/4515794‑4515697
                                                                                                                                                                                                           
TGCAGCAGGCTGTTGAAGGTGTGCACCTCATCCGGCGCATATTTGCTTTTCAGCATCAGGTCGTCGATGCGGGTGGCGCTGTGCTCGCGCCAGTCACTGC                                                                                                         >  1:708275/1‑100
 GCAGCAGGCTGTTGAAGGTGTGCACCTCATCCGGCGCATATTTGCTTTTCAGCATCAGGTCGTCGATGCGGGTGGCGCTGTGCTCGCGCCAGTCACTGCC                                                                                                        >  1:936065/1‑100
    GCAGGCTGTTGAAGGTGTGCACCTCATCCGGCGCATATTTGCTTTTCAGCATCAGGTCGTCGATGCGGGTGGCGCTGTGCTCGCGCCAGTCACTGCCGCG                                                                                                     >  1:1378133/1‑100
    GCAGGCTGTTGAAGGTGTGCACCTCATCCGGCGCATATTTGCTTTTCAGCATCAGGTCGTCGATGCGGGTGGCGCTGTGCTCGCGCCAGTCACTGCCGCG                                                                                                     >  1:1714459/1‑100
    GCAGGCTGTTGAAGGTGTGCACCTCATCCGGCGCATATTTGCTTTTCAGCATCAGGTCGTCGATGCGGGTGGCGCTGTGCTCGCGCCAGTCACTGCCGCG                                                                                                     >  2:1427925/1‑100
                          CTCATCCGGCGCATATTTGCTTTTCAGCATCAGGTCGTCGATGCGGGTGGCGCTGTGCTCGCGCCAGTCACTGCCGCGCTGCTCTACTCCGGCACGCGCG                                                                               <  1:1669061/100‑1
                          CTCATCCGGCGCATATTTGCTTTTCAGCATCAGGTCGTCGATGCGGGTGGCGCTGTGCTCGCGCCAGTCACTGCCGCGCTGCTCTACTCCGGCACGCGCG                                                                               <  1:1933512/100‑1
                            CATCCGGCGCATATTTGCTTTTCAGCATCAGGTCGTCGATGCGGGTGGCGCTGTGCTCGCGCCAGTCACTGCCGCGCTGCTCTACTCCGGCACGCGCGGC                                                                             <  1:1427932/100‑1
                            CATCCGGCGCATATTTGCTTTTCAGCATCAGGTCGTCGATGCGGGTGGCGCTGTGCTCGCGCCAGTCACTGCCGCGCTGCTCTACTCCGGCACGCGCGGC                                                                             <  1:1036897/100‑1
                              TCCGGCGCATATTTGCTTTTCAGCATCAGGTCGTCGATGCGGGTGGCGCTGTGCTCGCGCCAGTCACTGCCGCGCTGCTCTACTCCGGCACGCGCGGCAG                                                                           <  1:1925507/100‑1
                                 GGCGCATATTTGCTTTTCAGCATCAGGTCGTCGATGCGGGTGGCGCTGTGCTCGCGCCAGTCACTACCGCGCTGCTCTACTCCGGCACGCGCGGCAGTGA                                                                        <  2:2562967/100‑1
                                         TTTGCTTTTCAGCATCAGGTCGTCGATGCGGGTGGCGCTGTGCTCGCGCCAGTCACTACCGCGCTGCTCTACTCCGGCACGCGCGGCAGTGACTGGCGCG                                                                <  1:1387822/100‑1
                                          TTGCTTTTCAGCATCAGGTCGTCGATGCGGGTGGCGCTGTGCTCGCGCCAGTCACTGCCGCGCTGCTCTACTCCGGCACGCGCGGCAGTGACTGGCGCGA                                                               <  1:862260/100‑1
                                                                                                     GCGCTGCTCTACTCCGGCACGCGCGGCAGTGACTGGCGCGAGCACAGCGCCACCCGCATCGACGACCTGATGCTGAAAAGCAAATATGCGCCGGATGAGG    <  1:1427624/100‑1
                                                                                                     GCGCTGCTCTACTCCGGCACGCGCGGCAGTGACTGGCGCGAGCACAGCGCCACCCGCATCGACGACCTGATGCTGAAAAGCAAATATGCGCCGGATGAGG    <  2:1811198/100‑1
                                                                                                      CGCTGCTCTACTCCGGCACGCGCGGCAGTGACTGGCGCGAGCACAGCGCCACCCGCATCGACGACCTGATGCTGAAAAGCAAATATGCGCCGGATGAGGT   >  2:792287/1‑100
                                                                                                       GCTGCTTTACTCCGGCACGCGCGGCAGTGACTGGCGCGAGCACAGCGCCACCCGCATCGACGACCTGATGCTGAAAAGCAAATATGCGCCGGATGAGGTG  <  1:2592161/100‑1
                                                                                                       GCTGCTCTACTCCGGCACGCGCGGCAGTGACTGGCGCGAGCACAGCGCCACCCGCATCGACGACCTGATGCTGAAAAGCAAATATGCGCCGGATGAGGTG  >  2:1250251/1‑100
                                                                                                                                                                                                           
TGCAGCAGGCTGTTGAAGGTGTGCACCTCATCCGGCGCATATTTGCTTTTCAGCATCAGGTCGTCGATGCGGGTGGCGCTGTGCTCGCGCCAGTCACTGCCGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/4515674‑4515778
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcgcTGCTCTACTCCGGCACGCGCGGCAGTGACTGGCGCGAGCACAGCGCCACCCGCATCGACGACCTGATGCTGAAAAGCAAATATGCGCCGGATGAGGTG  <  NC_000913/4515794‑4515697

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.