New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2808135 =NA (NA)9 (0.100) 6/164 NT NA noncoding (5/84 nt) REP193 (repetitive extragenic palindromic) element; contains 2 REP sequences REP193 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 2808165 = NA (NA)noncoding (35/84 nt) REP193 (repetitive extragenic palindromic) element; contains 2 REP sequences REP193 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 133 total aligned reads displayed.

ATATTCAGGGACACGTTGATGGTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCA  >  NC_000913/2808036‑2808234
                                                                                                   |                                                                                                   
tgatgaatatgggatgaaagatagattgttgaaatgtgcgatgtggtttgtaggcatgataagacgcgccagcgtcgcatcaggcattgtgcacagaacg                                                                                                     <  1:1133304‑M1/1‑1 (MQ=255)
 tctgaatatgggatgaaagattgattgttgaaatgtgcgatgtggtttgtaggcatgataagacgcgccagcgtcgcatcaggcattgtgcacagaacgg                                                                                                    >  1:1261129‑M1/99‑100 (MQ=255)
 tatTCAGGGACACGTTGATGGTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCggg                                                                                                    >  2:1884098/1‑100 (MQ=255)
 tatTCAGGGACACGTTGATGGTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAAAGAGGCGCTGGCAGCGCAGAAGTAATCTTTATTCggg                                                                                                    >  2:2376820/1‑100 (MQ=255)
  atTCAGGGACACGTTGATGGTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGc                                                                                                   >  1:1118743/1‑100 (MQ=255)
   ttCAGGGACACGTTGATGGTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCg                                                                                                  >  1:2399721/1‑100 (MQ=255)
   ttCAGGGACACGTTGATGGTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCg                                                                                                  <  1:1406962/100‑1 (MQ=255)
   tgaatatgggatgaaagatagattgttgaaatgtgcgatgtggtttgtaggcatgataagacgcgccagcgtcgcatcaggcattgtgcacagaacggcg                                                                                                  <  1:1506993‑M1/4‑1 (MQ=255)
    tCAGGGACACGTTGATGGTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCgg                                                                                                 >  2:2142362/1‑100 (MQ=255)
    gaatatgggatgaaagattgattgttgaaatgtgcgatgtggtttgtaggcatgataagacgcgccagcgtcgcatcaggcattgtgcacagaacggaga                                                                                                 <  2:1261123‑M1/5‑4 (MQ=255)
     cAGGGACACGTTGATGGTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGa                                                                                                >  1:264120/1‑100 (MQ=255)
     cAGGGACACGTTGATGGTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGa                                                                                                >  2:1031107/1‑100 (MQ=255)
      atatgggatgaaagatagattgttgaaatgtgcgatgtggtttgtaggcatgataagacgcgccagcgtcgcatcaggcattgtgcacagaacGGCGGAt                                                                                               >  2:2255479‑M1/94‑100 (MQ=255)
       gggACACGTTGATGGTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATa                                                                                              <  1:1609650/100‑1 (MQ=255)
        ggACACGTTGATGGTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATaa                                                                                             <  1:2113225/100‑1 (MQ=255)
           cacGTTGATGGTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGc                                                                                          >  1:1399612/1‑100 (MQ=255)
             cGTTGATGGTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCg                                                                                         >  1:1299310/1‑99 (MQ=255)
                tGATGGTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGtttt                                                                                     >  1:623795/1‑100 (MQ=255)
                   tGGTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGc                                                                                  <  1:2468267/100‑1 (MQ=255)
                   tGGTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGc                                                                                  >  2:1506985/1‑100 (MQ=255)
                    ggTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGcc                                                                                 >  2:2257297/1‑100 (MQ=255)
                    ggTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGcc                                                                                 >  1:1069050/1‑100 (MQ=255)
                     gTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCg                                                                                <  1:2436061/100‑1 (MQ=255)
                     gTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCg                                                                                >  2:692036/1‑100 (MQ=255)
                     gTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGCAATTCTTATTCGGGCGGATAAGGCGCTTTTGcc                                                                                 >  2:569851/1‑99 (MQ=255)
                        ggATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCAt                                                                             >  1:1939065/1‑100 (MQ=255)
                         gATAAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATc                                                                            >  1:2396983/1‑100 (MQ=255)
                             aaaGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATccgcc                                                                        <  1:183772/100‑1 (MQ=255)
                             aaaGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATccgcc                                                                        >  2:456106/1‑100 (MQ=255)
                              gaaatgtgcgatgtggtttgtaggcatgataagacgcgccagcgtcgcatcaggcattgtgcacagaacGGCGGATAAGGCGTTTTTGCCGCATccgccg                                                                       >  1:1005930‑M1/70‑100 (MQ=255)
                              aaGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATccgccg                                                                       >  1:991620/1‑100 (MQ=255)
                               aaatgtgcgatgtggtttgtaggcatgataagacgcgccagcgtcgcatcaggcattgtgcacagaacGGCGGATAAGGCGTTTTTGCCGCATCCGCCGt                                                                      >  2:2187687‑M1/69‑100 (MQ=255)
                               aaatgtgcgatgtggtttgtaggcatgataagacgcgccagcgtcgcatcaggcattgtgcacagaacGGCGGATAAGGCGTTTTTGCCGCATCCGCCGt                                                                      >  1:1688097‑M1/69‑100 (MQ=255)
                               aaatgtgcgatgtggtttgtaggcatgataagacgcgccagcgtcgcatcaggcattgtgcacagaacGGCGGATAAGGCGTTTTTGCCGCATCCGCCGt                                                                      >  1:161508‑M1/69‑100 (MQ=255)
                                gCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGGTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATccgcc                                                                        <  2:2373097/97‑1 (MQ=255)
                                gCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGtt                                                                     >  2:137701/1‑100 (MQ=255)
                                aatgtgcgatgtggtttgtaggcatgataagacgcgccagcgtcgcatcaggcattgtgcacagaacGGCGGATAAGGCGTTTTTGCCGCATCCGCCGtt                                                                     >  1:120610‑M1/68‑100 (MQ=255)
                                 atgtgcgatgtggtttgtaggcatgataagactcgccagagtagcatcaggcattgtgcacagaacGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTc                                                                    >  2:1826651‑M1/67‑100 (MQ=255)
                                   caccaGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCtg                                                                  >  1:1685395/1‑100 (MQ=255)
                                   caccaGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCtg                                                                  >  1:1652949/1‑100 (MQ=255)
                                    tgcgatgtggtttgtaggcatgataagacgcgccagcgtcgcatcaggcattgtgcacagaacGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCtgt                                                                 >  1:1965542‑M1/64‑100 (MQ=255)
                                    accaGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCtgt                                                                 >  2:2078130/1‑100 (MQ=255)
                                     ccaGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCtgtg                                                                >  2:1617632/1‑100 (MQ=255)
                                        gtagcagTTCGATCGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGcac                                                             >  1:1762163/3‑100 (MQ=255)
                                         cagcagTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGcaca                                                            >  2:2107410/1‑100 (MQ=255)
                                         cagcagTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGcaca                                                            >  2:1487906/1‑100 (MQ=255)
                                             agTTCGATTGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGc                                                        <  2:2252159/100‑1 (MQ=255)
                                              gTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGcc                                                       >  1:473337/1‑100 (MQ=255)
                                               ttCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCt                                                      <  1:366239/100‑1 (MQ=255)
                                                tcgagtggtGGGTGGATGAGGCGCTGGCAGTGGAGAAGGAATTTTTATTCGGGCGGATAAAGCGTTTTTGACGCATCCGCTGTTCTGTGGACAATGc                                                        <  2:194467/89‑1 (MQ=255)
                                                  ttccgatctgTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGAt                                                   <  2:890795/91‑1 (MQ=255)
                                                  gATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGAt                                                   >  2:1603124/1‑100 (MQ=255)
                                                  gATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGAt                                                   <  1:2395114/100‑1 (MQ=255)
                                                   aTGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGTATAAGGCGTTTTTGCCACATCCGCCGTTCTGTGCACAATGCCTGATg                                                  <  1:697260/100‑1 (MQ=255)
                                                    tGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGc                                                 >  1:1027353/1‑100 (MQ=255)
                                                      gCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGCTGCGa                                               >  2:847215/1‑100 (MQ=255)
                                                       cTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGAc                                              >  1:1041749/1‑100 (MQ=255)
                                                         gggTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACg                                             <  1:1031408/99‑1 (MQ=255)
                                                         gggTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGc                                            >  1:2432815/1‑100 (MQ=255)
                                                          ggTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCt                                           <  1:2503860/100‑1 (MQ=255)
                                                            tGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTgg                                         <  2:1046291/100‑1 (MQ=255)
                                                             gAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGgc                                        >  1:493202/1‑100 (MQ=255)
                                                              aaTGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGgcg                                       <  2:1724149/100‑1 (MQ=255)
                                                              aaTGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGgcg                                       <  2:300654/100‑1 (MQ=255)
                                                               cttctgcgcTGCCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGgcgc                                      >  2:2290291/6‑100 (MQ=255)
                                                               aTGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGgcgc                                      <  2:592680/100‑1 (MQ=255)
                                                                  aGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTc                                   >  2:775961/1‑100 (MQ=255)
                                                                  aGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTc                                   <  1:2117185/100‑1 (MQ=255)
                                                                   ggCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCt                                  <  1:1603133/100‑1 (MQ=255)
                                                                     cgcTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTa                                <  1:821126/100‑1 (MQ=255)
                                                                     cgcTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTa                                >  2:263148/1‑100 (MQ=255)
                                                                     cgcTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCATCTTa                                >  1:1646367/1‑100 (MQ=255)
                                                                      gcTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTa                                <  2:600233/99‑1 (MQ=255)
                                                                      gcTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTAt                               <  2:1348373/100‑1 (MQ=255)
                                                                      gcTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTAt                               <  1:1995076/100‑1 (MQ=255)
                                                                        tGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCa                             <  1:2257310/100‑1 (MQ=255)
                                                                             gcgcAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCt                        <  1:1617641/100‑1 (MQ=255)
                                                                              cgcAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTa                       <  2:1095436/100‑1 (MQ=255)
                                                                               gcAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTATGTGCACAATGCCTGAGGCGACGCTGGCGCGTCTTCTCATGCCt                        >  2:440449/1‑98 (MQ=255)
                                                                                  gAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACaaa                   >  1:1057739/1‑100 (MQ=255)
                                                                                    aGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAAcc                 <  2:481929/100‑1 (MQ=255)
                                                                                    aGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAAcc                 <  1:450123/100‑1 (MQ=255)
                                                                                    aGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAAcc                 <  2:1069045/100‑1 (MQ=255)
                                                                                    aGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAAcc                 >  1:2338591/1‑100 (MQ=255)
                                                                                      tAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACcac               <  1:1240477/100‑1 (MQ=255)
                                                                                      tAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACcac               <  2:2432802/100‑1 (MQ=255)
                                                                                       aaTTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACcaca              >  2:264877/1‑100 (MQ=255)
                                                                                       aaTTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACcaca              <  2:67087/100‑1 (MQ=255)
                                                                                        aTTTTTATTCGGGCGGATAAGGCGTTTTTGACGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACcaca              <  1:1872425/99‑1 (MQ=255)
                                                                                         tttttATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATc            >  1:2601314/1‑100 (MQ=255)
                                                                                         nttttATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATc            >  1:982528/2‑100 (MQ=255)
                                                                                          ttttATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCg           >  1:1130807/1‑100 (MQ=255)
                                                                                          ttttATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCg           <  1:2526277/100‑1 (MQ=255)
                                                                                          ttttATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCg           <  1:2186673/100‑1 (MQ=255)
                                                                                            ttATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGca         <  1:242641/100‑1 (MQ=255)
                                                                                                 cGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACAttt    >  1:2312359/1‑100 (MQ=255)
                                                                                                 cGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACAttt    >  2:2163428/1‑100 (MQ=255)
                                                                                                 cGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACAttt    >  1:1787724/1‑100 (MQ=255)
                                                                                                  gggCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTc   >  2:664997/1‑100 (MQ=255)
                                                                                                   GGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTca  <  2:1900985‑M1/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
ATATTCAGGGACACGTTGATGGTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCA  >  NC_000913/2808036‑2808234

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.