New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4266888 =NA (NA)5 (0.060) 5/164 NT NA noncoding (1/97 nt) RIP318 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP318 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
?NC_000913 4266918 = NA (NA)noncoding (31/97 nt) RIP318 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP318 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site

Only 100 of 123 total aligned reads displayed.

AATGACGAAAGTAAGCGCTTACGAACTTATTACGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGA  >  NC_000913/4266789‑4266987
                                                                                                   |                                                                                                   
aaTGACGAAAGTAAGCGCTTACGAACTTATTACGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCtgtg                                                                                                     <  2:1913228/100‑1 (MQ=255)
aaTGACGAAAGTAAGCGCTTACGAACTTATTACGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCtgtg                                                                                                     <  1:926600/100‑1 (MQ=255)
 aTGACGAAAGTAAGCGCTTACGAACTTATTACGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGc                                                                                                    <  2:1774061/100‑1 (MQ=255)
  tGACGAAAGTAAGCGCTTACGAACTTATTACGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGcc                                                                                                   <  2:2132480/100‑1 (MQ=255)
   gACGAAAGTAAGCGCTTACGAACTTATTACGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCg                                                                                                  >  2:891671/1‑100 (MQ=255)
    aCGAAAGTAAGCGCTTACGAACTTATTACGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCgg                                                                                                 >  1:2104670/1‑100 (MQ=255)
     cGAAAGTAAGCGCTTACGAACTTATTACGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGa                                                                                                >  2:2350056/1‑100 (MQ=255)
     cGAAAGTAAGCGCTTACGAACTTATTACGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGa                                                                                                >  1:1393807/1‑100 (MQ=255)
      gtgagactcatgacaaacgtacatccgccagaggcacgacctttataagagcatgaaagaacatcaacttattgaatttttaggattttattgGCCGGAt                                                                                               <  2:1019613‑M1/7‑1 (MQ=255)
       aaaGTAAGCGCTTACGAACTTATTACGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATg                                                                                              >  2:2199781/1‑100 (MQ=255)
       aaaGTAAGCGCTTACGAACTTATTACGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATg                                                                                              >  1:2231330/1‑100 (MQ=255)
           tAAGCGCTTACGAACTTATTACGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATgcggc                                                                                          <  2:2110454/100‑1 (MQ=255)
              gcgcTTACGAACTTATTACGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTg                                                                                       <  1:1454076/100‑1 (MQ=255)
              gcgcTTACGAACTTATTACGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTg                                                                                       <  1:1898634/100‑1 (MQ=255)
              gcgcTTACGAACTTATTACGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTg                                                                                       <  1:1277017/100‑1 (MQ=255)
              gcgcTTACGAACTTATTACGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTCTGCCGGGTGCGGCGTg                                                                                       >  2:1729068/1‑100 (MQ=255)
                    aCGAACTTATTACGCGCCTGACTTCAAGGGTCGCGATGAAATTCGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGcc                                                                                 <  2:291542/100‑1 (MQ=255)
                    aCGAACTTATTACGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGcc                                                                                 <  2:633179/100‑1 (MQ=255)
                     cGAACTTATTACGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCt                                                                                <  1:1001455/100‑1 (MQ=255)
                     cGAACTTATTACGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCt                                                                                >  2:2532413/1‑100 (MQ=255)
                     cGAACTTATTACGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCt                                                                                <  2:2328145/100‑1 (MQ=255)
                     cGAACTTATTACGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCt                                                                                >  1:433439/1‑100 (MQ=255)
                      gAACTTATTACGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCtt                                                                               >  1:1996451/1‑100 (MQ=255)
                       aaCTTATTACGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTa                                                                              >  1:1001131/1‑100 (MQ=255)
                       aaCTTATTACGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTa                                                                              >  1:2308306/1‑100 (MQ=255)
                        aCTTATTACGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTAt                                                                             >  1:688598/1‑100 (MQ=255)
                         cTTATTACGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATc                                                                            <  1:2452149/100‑1 (MQ=255)
                           tattaCGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATcc                                                                           >  1:311277/1‑99 (MQ=255)
                            atccgccagaggcacgacctttataagagcatgaaagaacatcaacttattgaatttttaggattttattgGCCGGATGCGGCGTGAATGCCTTATCCgg                                                                         >  1:382549‑M1/72‑100 (MQ=255)
                             ttaCGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGc                                                                        >  1:2456010/1‑100 (MQ=255)
                             ttaCGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGc                                                                        >  2:1890293/1‑100 (MQ=255)
                             tgaCGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTGCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGc                                                                        <  2:849308/98‑1 (MQ=255)
                              taCGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGcc                                                                       >  2:1767344/1‑100 (MQ=255)
                              ccgccagaggcacgacctttataagagcatgaaagaacatcaacttattgaatttttaggattttattgGCCGGATGCGGCGTGAATGCCTTATCCGGcc                                                                       >  2:115755‑M1/70‑100 (MQ=255)
                                 ccagaggcacgacctttataagagcatgaaagaacatcaacttattgaatttttaggattttattgGCCGGATGCGGCGTGAATGCCTTATCCGGCCAAt                                                                    >  1:2001557‑M1/67‑100 (MQ=255)
                                   gcCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAAt                                                                    >  1:1341920/1‑98 (MQ=255)
                                   agaggcacgacctttataagagcatgaaagaacatcaacttattgaatttttaggattttattgGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATaa                                                                  >  1:1103758‑M1/65‑100 (MQ=255)
                                    ccTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATaaa                                                                 >  1:2323158/1‑100 (MQ=255)
                                      tGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAAt                                                               <  1:2391447/100‑1 (MQ=255)
                                      tGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAAt                                                               <  1:2506072/100‑1 (MQ=255)
                                      tGACTTCAAGGGGCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAAt                                                               <  1:2115595/100‑1 (MQ=255)
                                        aCTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATcc                                                             <  2:251853/100‑1 (MQ=255)
                                        aCTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATcc                                                             <  1:1702784/100‑1 (MQ=255)
                                        aCTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATcc                                                             <  1:2379937/100‑1 (MQ=255)
                                        aCTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATcc                                                             <  1:1549442/100‑1 (MQ=255)
                                           tCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGGGAATGCCTTATCCGGCCAATAAAATCCTaa                                                          <  2:2330292/100‑1 (MQ=255)
                                           ncAAGGGTCGCGATGAAATACGTGGATTAATCGGTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTCAATGCCTTATCCGGCCAATAAAATCCTaa                                                          >  2:1563367/2‑100 (MQ=255)
                                             aaGGGTCGCGATGAAATACGTGGATTAATGGCTCTGTAATATTTGAGTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTaaaa                                                        <  2:2350500/100‑1 (MQ=255)
                                             aaGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCCaaaa                                                        >  2:2540009/1‑100 (MQ=255)
                                              aGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTaaaaa                                                       <  2:1413717/100‑1 (MQ=255)
                                                  tCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCa                                                   <  2:2231318/100‑1 (MQ=255)
                                                  tCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCa                                                   <  2:735900/100‑1 (MQ=255)
                                                    gcgATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAAt                                                 >  1:689526/1‑100 (MQ=255)
                                                    gcgATGAAAGACGTGGATTAATCGTTCTGTAATTTTTAATTGGGTGTGACGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAAt                                                 <  2:1043533/100‑1 (MQ=37)
                                                       aTGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGTTTTATCTGGCCAATAAAATCCTAAAAATTCAATAAg                                              >  2:2471692/1‑100 (MQ=255)
                                                         gAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGtt                                            >  1:1846781/1‑100 (MQ=255)
                                                           aaTACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGa                                          >  1:47277/1‑100 (MQ=255)
                                                            aTACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGAt                                         <  2:573121/100‑1 (MQ=255)
                                                              aCGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGt                                       <  2:370756/100‑1 (MQ=255)
                                                               cGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGtt                                      >  2:1768353/1‑100 (MQ=255)
                                                               cGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGtt                                      >  1:956899/1‑100 (MQ=255)
                                                                gTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTc                                     >  1:2534194/1‑100 (MQ=255)
                                                                gTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTc                                     <  1:287287/100‑1 (MQ=255)
                                                                 tGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCt                                    <  1:480001/100‑1 (MQ=255)
                                                                  ggATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCtt                                   <  1:1756580/100‑1 (MQ=255)
                                                                  acatcaacttattgaatttttaggatgttattgGCCGGATGCGGCGTGAATGCCTTATCCGTACAATAAAATCCTAAAAATTCAATAAGTTGATGTTCt                                    >  1:282039‑M1/34‑99 (MQ=255)
                                                                    aTTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCAAATAAAAAAAAAAAAATTCAATAAGTTGATGTTCTTTc                                 <  2:1383229/100‑1 (MQ=38)
                                                                      tAATCGTTCTGTAATATTTGATTGTCTGTACCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCAt                               <  2:767578/100‑1 (MQ=255)
                                                                       aaTCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATg                              >  2:1744052/1‑100 (MQ=255)
                                                                       aaTCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATg                              <  1:1069740/100‑1 (MQ=255)
                                                                       aaTCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATg                              <  1:1296302/100‑1 (MQ=255)
                                                                        aTCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGc                             >  1:459424/1‑100 (MQ=255)
                                                                         tCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGct                            <  2:1626180/100‑1 (MQ=255)
                                                                         tCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGct                            <  2:1170328/100‑1 (MQ=255)
                                                                          cGTTCTGTAATATTTGATTTTATCTCCCTGATGCCGCGTGAATGCCTTATCCGGCCAATAGCATCCCAAAAATTCAATAAGTTGATGTTCTTTCATGctc                           <  2:2581282/100‑1 (MQ=255)
                                                                           gTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGctct                          <  2:2231010/100‑1 (MQ=255)
                                                                           gTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGctct                          >  2:1892669/1‑100 (MQ=255)
                                                                           gTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGctct                          <  2:633404/100‑1 (MQ=255)
                                                                           gTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGctct                          <  2:2440862/100‑1 (MQ=255)
                                                                           gTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGctct                          <  2:1274142/100‑1 (MQ=255)
                                                                            ttCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCtt                         <  1:1570249/100‑1 (MQ=255)
                                                                             tCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTta                        >  1:1084047/1‑100 (MQ=255)
                                                                             tCTGTAATATTTGATTGGCTGTGCCGTATGCGGCGTGAATGCCTTATCCGGTCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTta                        <  2:2558257/100‑1 (MQ=255)
                                                                               tGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTtata                      >  1:2210028/1‑100 (MQ=255)
                                                                                gTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATaa                     >  1:1351270/1‑100 (MQ=255)
                                                                                gTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATaa                     >  1:1832549/1‑100 (MQ=255)
                                                                                 tAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATaaa                    >  2:1040699/1‑100 (MQ=255)
                                                                                   atatTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAgg                  <  2:2070698/100‑1 (MQ=255)
                                                                                   atatTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAgg                  <  2:1001126/100‑1 (MQ=255)
                                                                                      tttGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCg               <  2:2075517/100‑1 (MQ=255)
                                                                                            tGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCctc         <  2:1927661/100‑1 (MQ=255)
                                                                                             gTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGCCCAATAAAATACTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGATCGTGCctct        >  2:2038293/1‑100 (MQ=255)
                                                                                              tCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTg       <  1:193969/100‑1 (MQ=255)
                                                                                               cTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTgg      <  2:1199736/100‑1 (MQ=255)
                                                                                               cTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTgg      <  1:353637/100‑1 (MQ=255)
                                                                                                tgtgCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGc     <  2:2098500/100‑1 (MQ=255)
                                                                                                tgtgCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGc     <  1:191590/100‑1 (MQ=255)
                                                                                                tgtgCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGc     >  1:2188482/1‑100 (MQ=255)
                                                                                                 gtgCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCg    >  1:89395/1‑100 (MQ=255)
                                                                                                 gtgCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCg    <  2:850813/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
AATGACGAAAGTAAGCGCTTACGAACTTATTACGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGA  >  NC_000913/4266789‑4266987

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.