New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4266888 =NA (NA)5 (0.060) 5/164 NT NA noncoding (1/97 nt) RIP318 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP318 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
?NC_000913 4266918 = NA (NA)noncoding (31/97 nt) RIP318 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP318 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site

Only 100 of 127 total aligned reads displayed.

TACGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTACGTTTGTCATGAGTCTCACTCTGTTG  >  NC_000913/4266819‑4267017
                                                                                                   |                                                                                                   
taCGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGcc                                                                                                     >  2:1767344/1‑100 (MQ=255)
 aCGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCa                                                                                                    >  1:1375922/1‑100 (MQ=255)
   ccagaggcacgacctttataagagcatgaaagaacatcaacttattgaatttttaggattttattgGCCGGATGCGGCGTGAATGCCTTATCCGGCCAAt                                                                                                  >  1:2001557‑M1/67‑100 (MQ=255)
     gcCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAAt                                                                                                  >  1:1341920/1‑98 (MQ=255)
      ccTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATaaa                                                                                               >  1:2323158/1‑100 (MQ=255)
       cTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATaaaa                                                                                              <  1:943414/100‑1 (MQ=255)
        tGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAAt                                                                                             <  1:2506072/100‑1 (MQ=255)
        tGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAAt                                                                                             <  1:2391447/100‑1 (MQ=255)
        tGACTTCAAGGGGCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAAt                                                                                             <  1:2115595/100‑1 (MQ=255)
          aCTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATcc                                                                                           <  1:1190985/100‑1 (MQ=255)
          aCTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATcc                                                                                           <  1:1702784/100‑1 (MQ=255)
          aCTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATcc                                                                                           <  1:2379937/100‑1 (MQ=255)
          aCTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATcc                                                                                           <  2:251853/100‑1 (MQ=255)
             tCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGGGAATGCCTTATCCGGCCAATAAAATCCTaa                                                                                        <  2:2330292/100‑1 (MQ=255)
             ncAAGGGTCGCGATGAAATACGTGGATTAATCGGTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTCAATGCCTTATCCGGCCAATAAAATCCTaa                                                                                        >  2:1563367/2‑100 (MQ=255)
               aaGGGTCGCGATGAAATACGTGGATTAATGGCTCTGTAATATTTGAGTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTaaaa                                                                                      <  2:2350500/100‑1 (MQ=255)
               aaGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCCaaaa                                                                                      >  2:2540009/1‑100 (MQ=255)
                aGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTaaaaa                                                                                     <  2:1413717/100‑1 (MQ=255)
                    tCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCa                                                                                 <  2:2231318/100‑1 (MQ=255)
                    tCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCa                                                                                 <  2:735900/100‑1 (MQ=255)
                      gcgATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAAt                                                                               >  1:689526/1‑100 (MQ=255)
                      gcgATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATACGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAAt                                                                               >  2:2279317/1‑100 (MQ=255)
                      gcgATGAAAGACGTGGATTAATCGTTCTGTAATTTTTAATTGGGTGTGACGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAAt                                                                               <  2:1043533/100‑1 (MQ=37)
                         aTGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGTTTTATCTGGCCAATAAAATCCTAAAAATTCAATAAg                                                                            >  2:2471692/1‑100 (MQ=255)
                           gAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGtt                                                                          >  1:1846781/1‑100 (MQ=255)
                                aCGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGt                                                                     <  2:370756/100‑1 (MQ=255)
                                 cGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGtt                                                                    >  1:956899/1‑100 (MQ=255)
                                 cGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGtt                                                                    >  2:1768353/1‑100 (MQ=255)
                                 agaacatcaacttattgaatttttaggattttattgtacggataaggcattcacgccgcatccggcCAATAACATCCTAAAAATTCAATAAGTTGATGt                                                                     >  1:282039‑M2/67‑99 (MQ=255)
                                  gTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTc                                                                   <  1:287287/100‑1 (MQ=255)
                                  gTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTc                                                                   >  1:2534194/1‑100 (MQ=255)
                                   tGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCt                                                                  <  1:480001/100‑1 (MQ=255)
                                        tAATCGTTCTGTAATATTTGATTGTCTGTACCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCAt                                                             <  2:767578/100‑1 (MQ=255)
                                         aaTCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATg                                                            <  1:1296302/100‑1 (MQ=255)
                                         aaTCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATg                                                            <  1:1069740/100‑1 (MQ=255)
                                          aTCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGc                                                           >  1:459424/1‑100 (MQ=255)
                                           tCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGct                                                          <  2:1170328/100‑1 (MQ=255)
                                            cGTTCTGTAATATTTGATTTTATCTCCCTGATGCCGCGTGAATGCCTTATCCGGCCAATAGCATCCCAAAAATTCAATAAGTTGATGTTCTTTCATGctc                                                         <  2:2581282/100‑1 (MQ=255)
                                             gTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGctct                                                        <  2:1274142/100‑1 (MQ=255)
                                             gTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGctct                                                        >  2:1892669/1‑100 (MQ=255)
                                             gTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGctct                                                        <  2:2440862/100‑1 (MQ=255)
                                             gTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGctct                                                        <  2:633404/100‑1 (MQ=255)
                                              ttCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCtt                                                       <  1:1570249/100‑1 (MQ=255)
                                               tCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTta                                                      >  1:1084047/1‑100 (MQ=255)
                                               tCTGTAATATTTGATTGGCTGTGCCGTATGCGGCGTGAATGCCTTATCCGGTCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTta                                                      <  2:2558257/100‑1 (MQ=255)
                                                 tGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTtata                                                    >  1:2210028/1‑100 (MQ=255)
                                                  gTAATATTTTATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCTAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATaa                                                   <  2:2533140/100‑1 (MQ=255)
                                                  gTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATaa                                                   >  1:1832549/1‑100 (MQ=255)
                                                  gTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATaa                                                   >  1:1351270/1‑100 (MQ=255)
                                                   tAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATaaa                                                  >  2:1040699/1‑100 (MQ=255)
                                                     atatTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAgg                                                >  2:1075997/1‑100 (MQ=255)
                                                     atatTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAgg                                                >  1:1724033/1‑100 (MQ=255)
                                                     atatTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAgg                                                <  2:1001126/100‑1 (MQ=255)
                                                     atatTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAgg                                                <  2:2070698/100‑1 (MQ=255)
                                                      tatTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGt                                               <  2:1979466/100‑1 (MQ=255)
                                                        tttGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCg                                             <  2:2075517/100‑1 (MQ=255)
                                                            aTTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGcc                                         <  2:374288/100‑1 (MQ=255)
                                                              tGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCctc                                       <  2:1927661/100‑1 (MQ=255)
                                                               ttattggccggataaggcattcacgccgcatccggcCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCctct                                      >  1:1103758‑M2/37‑100 (MQ=255)
                                                                tCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTg                                     <  1:193969/100‑1 (MQ=255)
                                                                 cTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTgg                                    <  1:353637/100‑1 (MQ=255)
                                                                 cTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTgg                                    >  2:2098797/1‑100 (MQ=255)
                                                                 cTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTgg                                    <  2:1199736/100‑1 (MQ=255)
                                                                  tgtgCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGc                                   <  2:2098500/100‑1 (MQ=255)
                                                                  tgtgCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGc                                   <  1:191590/100‑1 (MQ=255)
                                                                  tgtgCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGc                                   >  1:2188482/1‑100 (MQ=255)
                                                                   gtgCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCg                                  <  2:850813/100‑1 (MQ=255)
                                                                   gtgCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCg                                  >  1:89395/1‑100 (MQ=255)
                                                                    ggccggataaggcattcacgccgcatccggcCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCgg                                 >  2:115755‑M2/32‑100 (MQ=255)
                                                                      ccggataaggcattcacgccgcatccggcCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGAt                               >  1:382549‑M2/30‑100 (MQ=255)
                                                                      CCGGATGCGGCGTGAATGCCTTATCCGGCTAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGAt                               >  2:348813‑M1/1‑100 (MQ=255)
                                                                         GATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATgtn                            >  2:1796650‑M1/1‑99 (MQ=255)
                                                                         GATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTa                            <  1:1119229‑M1/100‑1 (MQ=255)
                                                                          ATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTAc                           >  2:736727‑M1/1‑100 (MQ=255)
                                                                           TGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTACg                          >  1:468945‑M1/1‑100 (MQ=255)
                                                                           TGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTACg                          >  2:2036416‑M1/1‑100 (MQ=255)
                                                                           TGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTACg                          >  1:4932‑M1/1‑100 (MQ=255)
                                                                           TGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTACg                          <  2:2349661‑M1/100‑1 (MQ=255)
                                                                             cggcgTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTACGtt                        <  1:1030177/100‑1 (MQ=255)
                                                                              ggcgTGAATGCCTTATCCGGTCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTACGttt                       >  2:1594882/1‑100 (MQ=255)
                                                                              ggcgTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTACGttt                       >  2:1811904/1‑100 (MQ=255)
                                                                                   gAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTACGTTTGTCAt                  >  2:698116/1‑100 (MQ=255)
                                                                                   gAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTACGTTTGTCAt                  <  1:1114066/100‑1 (MQ=255)
                                                                                   gAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTACGTTTGTCAt                  >  1:2500348/1‑100 (MQ=255)
                                                                                    aaTGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTACGTTTGTCATg                 >  2:778888/1‑100 (MQ=255)
                                                                                    aaTGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTACGTTTGTCATg                 <  1:2443140/100‑1 (MQ=255)
                                                                                      tGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTACGTTTGTCATgtg               <  1:1767353/100‑3 (MQ=255)
                                                                                      tGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTACGTTTGTCATGAg               <  2:2444363/100‑1 (MQ=255)
                                                                                      tGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTACGTTTGTCATGAg               <  1:1822716/100‑1 (MQ=255)
                                                                                       gCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTACGTTTGTCATGAGt              >  1:101490/1‑100 (MQ=255)
                                                                                       gCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTACGTTTGTCATGAGt              >  2:1629012/1‑100 (MQ=255)
                                                                                        ccTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTACGTTTGTCATGAGtc             >  1:1969413/1‑100 (MQ=255)
                                                                                        ccTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTACGTTTGTCATGAGtc             >  2:2258944/1‑100 (MQ=255)
                                                                                          ttATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTACGTTTGTCATGAGtctc           >  2:1742716/1‑100 (MQ=255)
                                                                                           tATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTACGTTTGTCATGAGTCTCa          >  1:2596899/1‑100 (MQ=255)
                                                                                           tATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTACGTTTGTCATGAGTCTCa          >  1:413464/1‑100 (MQ=255)
                                                                                               cggcCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTACGTTTGTCATGAGTCTCActct      <  1:51161‑M2/96‑1 (MQ=255)
                                                                                                  cCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGATCGTGCCTCTGGCGGATGTACGTTTGTCATGAGTCTCACTCTGtt   >  2:1678453‑M2/2‑100 (MQ=255)
                                                                                                   cAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTACGTTTGTCATGAGTCTCACTCTGTTg  <  2:433435/100‑1 (MQ=255)
                                                                                                   cAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTACGTTTGTCATGAGTCTCACTCTGTTg  <  2:1393800/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
TACGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTACGTTTGTCATGAGTCTCACTCTGTTG  >  NC_000913/4266819‑4267017

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.