New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4536087 =98 (1.050)5 (0.060) 5/160 NT 5.8% intergenic (+56/+527) yjhR/nanS pseudogene, helicase family; putative frameshift suppressor/9‑O‑acetyl N‑acetylneuraminic acid esterase
?NC_000913 4536120 = 73 (0.870)intergenic (+89/+494) yjhR/nanS pseudogene, helicase family; putative frameshift suppressor/9‑O‑acetyl N‑acetylneuraminic acid esterase
Rejected: Frequency below cutoff threshold.

Only 100 of 123 total aligned reads displayed.

AAATAAAGGCAATATATGGTAGTCTGGATCAACGTCAGCTTTAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGC  >  NC_000913/4535988‑4536186
                                                                                                   |                                                                                                   
gcttgcattttctttcattcctaaaagcacccgccattaatcccaggcgcattatgcaaaggaaaatgattaggtaaacaataagatttataatcaggaa                                                                                                     <  2:1745648‑M1/1‑1 (MQ=255)
aaaTAAAGGCAATATATGGTAGTCTGGATCAACGTCAGCTTTAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTa                                                                                                     <  1:389315/100‑1 (MQ=255)
aaaTAAAGGCAATATATGGTAGTCTGGATCAACGTCAGCTTTAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTa                                                                                                     <  1:2144457/100‑1 (MQ=255)
 cttgcattttctttcattcctaaaagcacccgccattaatcccaggcgcattatgcaaaggaaaatgattaggtaaacaataagatttataatcaggaaa                                                                                                    >  2:2441877‑M1/99‑100 (MQ=255)
 aaTAAAGGCAATATATGGTAGTCTGGATCAACGTCAGCTTTAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTaa                                                                                                    >  1:2243790/1‑100 (MQ=255)
  ttgcattttctttcattcctaaaagcacccgccattaatcccaggcgcattatgcaaaggaaaatgattaggtaaacaataagatttataatcaggaaa                                                                                                    <  2:853303‑M1/2‑1 (MQ=255)
  acaaaGGCAATATATGGTAGTCTGGATCAACGTCAGCTTTAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAg                                                                                                   <  2:1578210/98‑1 (MQ=255)
  aTAAAGGCAATATATGGTAGTCTGGATCAACGTCAGCTTTAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAg                                                                                                   >  1:2256307/1‑100 (MQ=255)
  aTAAAGGCAATATATGGTAGTCTGGATCAACGTCAGCTTTAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAg                                                                                                   >  2:1208562/1‑100 (MQ=255)
  aTAAAGGCAATATATGGTAGTCTGGATCAACGTCAGCTTTAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAg                                                                                                   <  2:1303055/100‑1 (MQ=255)
    gcattttctttcattcctaaaagcacccgccattaatcccaggcgcattatgcaaaggaaaatgattaggtaaacaataagatttataatcaggaAAGGc                                                                                                 >  2:2554857‑M1/96‑100 (MQ=255)
    gcattttctttcattcctaaaagcacccgccattaatcccaggcgcattatgcaaaggaaaatgattaggtaaacaataagatttataatcaggaAAGGc                                                                                                 >  2:1959528‑M1/96‑100 (MQ=255)
      aGGCAATATATGGTAGTCTGGATCAACGTCAGCTTTAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGa                                                                                               >  1:528294/1‑100 (MQ=255)
       ttttctttcattcctaaaagcacccgccattaatcccaggcgcattatgcaaaggaaaatgattaggtaaacaataagatttataatcaggaAAGGCGAc                                                                                              <  2:2453830‑M1/8‑1 (MQ=255)
       ggCAATATATGGTAGTCTGGATCAACGTCAGCTTTAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGAc                                                                                              <  2:2158143/100‑1 (MQ=255)
         cAATATATGGTAGTCTGGATCAACGTCAGCTTTAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACtt                                                                                            >  2:1877795/1‑100 (MQ=255)
         cAATATATGGTAGTCTGGATCAACGTCAGCTTTAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACtt                                                                                            >  2:756382/1‑100 (MQ=255)
          aaTATATGGTAGTCTGGATCAACGTCAGCTTTAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACttt                                                                                           >  1:945730/1‑100 (MQ=255)
              tatGGTAGTCTGGATCAACGTCAGCTTTAAATGTGATGTGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGt                                                                                       <  2:740400/100‑1 (MQ=255)
              tatGGTAGTCTGGATCAACGTCAGCTTTAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGt                                                                                       >  1:835264/1‑100 (MQ=255)
               atGGTAGTCTGGATCAACGTCAGCTTTAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATCTTACCAATGTTAAGGCGACTTTCCGtt                                                                                      >  2:128149/1‑100 (MQ=255)
                 ggTAGTCTGGATCAACGTCAGCTTTAAATGTGATGAGTCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGtttt                                                                                    <  2:2546169/100‑1 (MQ=255)
                 ggTAGTCTGGATCAACGTCAGCTTTAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGtttt                                                                                    <  2:933715/100‑1 (MQ=255)
                  gTAGTCTGGATCAACGTCAGCTTTAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTa                                                                                   >  1:1633510/1‑100 (MQ=255)
                  gTAGTCTGGATCAACGTCAGCTTTAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTa                                                                                   <  1:1497084/100‑1 (MQ=255)
                   tAGTCTGGATCAACGTCAGCTTTAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTAt                                                                                  <  1:679610/100‑1 (MQ=255)
                    aGTCTGGATCAACGTCAGCTTTAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTAtt                                                                                 >  2:2418881/1‑100 (MQ=255)
                    aGTCTGGATCAACGTCAGCTTTAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTAtt                                                                                 <  2:273549/100‑1 (MQ=255)
                    aGTCTGGATCAACGTCAGCTTTAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTAtt                                                                                 >  1:903814/1‑100 (MQ=255)
                     gTCTGGATCAACGTCAGCTTTAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTg                                                                                >  2:622056/1‑100 (MQ=255)
                     gTCTGGATCAACGTCAGCTTTAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTg                                                                                >  2:987199/1‑100 (MQ=255)
                     gTCTGGATCAACGTCAGCTTTAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTg                                                                                >  1:1745657/1‑100 (MQ=255)
                       cTGGATCAACGTCAGCTTTAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCg                                                                              <  2:1961602/100‑1 (MQ=255)
                       cTGGATCAACGTCAGCTTTAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCg                                                                              <  2:2192286/100‑1 (MQ=255)
                       cTGGATCAACGACAGCTTTAAATGTGCTGCGCCCATCATGATACAGCAGTATTAAAGGGCATACTGTACCAATGTTAAGGCGACTTTCCGtgtt                                                                                    >  2:213568/1‑94 (MQ=255)
                        tGGATCAACGTCAGCTTTAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGa                                                                             <  2:851896/100‑1 (MQ=255)
                         ggATCAACGTCAGCTTTAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAg                                                                            >  2:1274364/1‑100 (MQ=255)
                            tCAACGTCAGCTTTAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACAAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTc                                                                          >  2:1079776/1‑99 (MQ=255)
                             cAACGTCAGCTTTAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGc                                                                        <  1:2500352/100‑1 (MQ=255)
                              aaCGTCAGCTTTAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGcc                                                                       >  2:2168699/1‑100 (MQ=255)
                              aaCGTCAGCTTTAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGcc                                                                       >  1:1418600/1‑100 (MQ=255)
                              aaCGTCAGCTTTAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGcc                                                                       >  2:1440880/1‑100 (MQ=255)
                                gccattaatcccaggcgcattatgcaaaggaaaatgattaggtaaacaataagatttataatcaggaAAGGCGACTTTCCGTTTTATTGCGAGTCGCCtt                                                                     >  1:960822‑M1/68‑100 (MQ=255)
                                   cAGCTTTAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTcc                                                                  <  2:6658/100‑1 (MQ=255)
                                    aGCTTTAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCt                                                                 >  1:773057/1‑100 (MQ=255)
                                     gCTTTAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTg                                                                >  2:2500926/1‑100 (MQ=255)
                                     gCTTTAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTg                                                                <  2:860642/100‑1 (MQ=255)
                                     gCTTTAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTg                                                                >  1:2502861/1‑100 (MQ=255)
                                     gCTGTAGATGTAGTGAGCCGGTCATGATACAGGAGGAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCGGTTTTATTGCGAGTCGCCTTTCCTg                                                                <  2:1863998/100‑1 (MQ=255)
                                        ttAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGAtt                                                             <  2:787030/100‑1 (MQ=255)
                                        ttAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGAtt                                                             <  2:1927306/100‑1 (MQ=255)
                                        ttAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGAtt                                                             <  2:1693636/100‑1 (MQ=255)
                                         cccaggcgcattatgcaaaggaaaatgattaggtaaacaataagatttataatcaggaAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATta                                                            >  1:2049027‑M1/59‑100 (MQ=255)
                                           aaTGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATtata                                                          >  1:1622129/1‑100 (MQ=255)
                                           aaTGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATtata                                                          >  1:1819365/1‑100 (MQ=255)
                                           aaTGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATtata                                                          >  1:1416205/1‑100 (MQ=255)
                                             tgtgATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATaaa                                                        <  1:1482434/100‑1 (MQ=255)
                                              gtgATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAAt                                                       >  2:666704/1‑100 (MQ=255)
                                               tgatgaGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATc                                                      <  1:2214042/100‑1 (MQ=255)
                                                  tgaGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTa                                                   >  1:485224/1‑100 (MQ=255)
                                                   gaGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTAt                                                  <  2:945725/100‑1 (MQ=255)
                                                    aGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTAtt                                                 <  1:905520/100‑1 (MQ=255)
                                                       cGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGtt                                              >  1:1002265/1‑100 (MQ=255)
                                                        gTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGttt                                             >  2:1739470/1‑100 (MQ=255)
                                                        gTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGttt                                             >  2:703440/1‑100 (MQ=255)
                                                          tCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTAc                                           <  2:2553405/100‑1 (MQ=255)
                                                           cATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTAcc                                          <  2:167715/100‑1 (MQ=255)
                                                            aTGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCt                                         <  1:703444/100‑1 (MQ=255)
                                                             tGATACAGGAGTAGTAAAGGACATATTTTACAAATGTTAAGGCGACTTTCCGATTTATTGAGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTa                                        >  2:347403/1‑100 (MQ=255)
                                                               aaatgattaggtaaacaataagatttataatcaggaAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAAt                                      >  1:776359‑M1/37‑100 (MQ=255)
                                                                  gaGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCAt                                   >  2:1181897/2‑100 (MQ=255)
                                                                  cAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCAt                                   >  2:2384331/1‑100 (MQ=255)
                                                                    ggAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCAttt                                 >  1:1944985/1‑100 (MQ=255)
                                                                      agtagtAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTc                               <  1:620481/100‑1 (MQ=255)
                                                                       gtagtaAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTcc                              >  2:224491/1‑100 (MQ=255)
                                                                          gtaAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCAttttagatc                           >  2:2138832/1‑95 (MQ=255)
                                                                          gtaAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCttt                           <  1:1083856/100‑1 (MQ=255)
                                                                           ttccgatcttatTTTTCCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTg                          <  1:2560998/91‑1 (MQ=255)
                                                                           taAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTg                          <  1:1858283/100‑1 (MQ=255)
                                                                            aaaGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATTTTATTGTTTACCTAATCATTTTCCTTTGc                         >  2:2436005/1‑100 (MQ=255)
                                                                            aaaGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGc                         <  1:238481/100‑1 (MQ=255)
                                                                            aaaGGGCATATTTTACCAATGTTAAGGCGACTTTCCGGTTTATTGCGAGTCGCCTTTCCTGACTATAAATCTTATTGTTTCCCTAATCATTTTCCTTTg                          >  2:2298065/1‑99 (MQ=255)
                                                                             ctccgatctttttACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCa                        <  1:820248/91‑1 (MQ=255)
                                                                             aaGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCa                        <  1:34998/100‑1 (MQ=255)
                                                                             aaGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCa                        <  1:415769/100‑1 (MQ=255)
                                                                                ggCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATaa                     >  1:63050/1‑100 (MQ=255)
                                                                                ggCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATa                      >  2:570837/1‑99 (MQ=255)
                                                                                 gCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAAt                    >  2:2014488/1‑100 (MQ=255)
                                                                                   atatTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATgc                  <  2:1661449/100‑1 (MQ=255)
                                                                                    tatTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGTGCGTCGCCTTTCCTGATTATAAATCTTATTGTTTATCTAATCATTTTCCTTTGCATAATgc                  >  2:1026611/1‑99 (MQ=255)
                                                                                    tatTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATgcg                 >  2:2502003/1‑100 (MQ=255)
                                                                                      ttttACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCaagatcggaa               >  2:820243/1‑91 (MQ=255)
                                                                                          aCCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTggg           <  2:291736/100‑1 (MQ=255)
                                                                                          aCCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTggg           >  1:1050131/1‑100 (MQ=255)
                                                                                           ccAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGa          >  2:1152187/1‑100 (MQ=255)
                                                                                            cAATGTTAAGGCGACTTTCCGTTTTGTTGCGAGTCGCCTTTCCTGATTATAAGTCTTATTGTTTGCCTAATCATTTTCCTTTGCATAATGCGCCTggg           >  2:29099/1‑98 (MQ=255)
                                                                                             aaTGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCATTTGCATAATGTGCCTGGGAtt        >  2:1761475/1‑100 (MQ=255)
                                                                                              aTGTTAAGCCGGCTTTCCGTTTTATTCCGAATCGCCTTTCCTGATTATAATTCTTATTGTGTACCTAATCATTTTCCTTGCCACAACGCGCCTGGGttt        <  2:848678/99‑1 (MQ=255)
                                                                                                gTTAAGGCGACTTTCCGTTTTATTGCGAGTCGTCTTTCCTGGTTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAAt     <  2:908720/100‑1 (MQ=255)
                                                                                                 ttAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATg    <  2:1296620/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
AAATAAAGGCAATATATGGTAGTCTGGATCAACGTCAGCTTTAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGC  >  NC_000913/4535988‑4536186

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.