New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4536087 =98 (1.050)5 (0.060) 5/160 NT 5.8% intergenic (+56/+527) yjhR/nanS pseudogene, helicase family; putative frameshift suppressor/9‑O‑acetyl N‑acetylneuraminic acid esterase
?NC_000913 4536120 = 73 (0.870)intergenic (+89/+494) yjhR/nanS pseudogene, helicase family; putative frameshift suppressor/9‑O‑acetyl N‑acetylneuraminic acid esterase
Rejected: Frequency below cutoff threshold.

Only 100 of 108 total aligned reads displayed.

CAGCTTTAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGC  >  NC_000913/4536023‑4536218
                                                                                                 |                                                                                                  
cAGCTTTAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTcc                                                                                                  <  2:6658/100‑1 (MQ=255)
 ttaatcccaggcgcattatgcaaaggaaaatgattaggtaaacaataagatttataatcaggaAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCt                                                                                                 >  1:1728829‑M1/64‑100 (MQ=255)
 aGCTTTAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCt                                                                                                 >  1:773057/1‑100 (MQ=255)
  gCTTTAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTg                                                                                                >  1:2502861/1‑100 (MQ=255)
  gCTTTAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTg                                                                                                <  2:860642/100‑1 (MQ=255)
  gCTTTAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTg                                                                                                >  2:2500926/1‑100 (MQ=255)
  gCTGTAGATGTAGTGAGCCGGTCATGATACAGGAGGAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCGGTTTTATTGCGAGTCGCCTTTCCTg                                                                                                <  2:1863998/100‑1 (MQ=255)
   cTTTAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGa                                                                                               <  2:868241/100‑1 (MQ=255)
    atcccaggcgcattatgcaaaggaaaatgattaggtaaacaataagatttataatcaggaAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTg                                                                                                >  2:1717536‑M1/61‑98 (MQ=255)
     ttAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGAtt                                                                                             <  2:787030/100‑1 (MQ=255)
     ttAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGAtt                                                                                             <  2:1693636/100‑1 (MQ=255)
     ttAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGAtt                                                                                             <  2:1927306/100‑1 (MQ=255)
      cccaggcgcattatgcaaaggaaaatgattaggtaaacaataagatttataatcaggaAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATta                                                                                            >  1:2049027‑M1/59‑100 (MQ=255)
        aaTGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATtata                                                                                          >  1:1819365/1‑100 (MQ=255)
        aaTGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATtata                                                                                          >  1:1622129/1‑100 (MQ=255)
        aaTGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATtata                                                                                          >  1:1416205/1‑100 (MQ=255)
          tgtgATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATaaa                                                                                        <  1:1482434/100‑1 (MQ=255)
           gtgATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAAt                                                                                       >  2:666704/1‑100 (MQ=255)
            tgatgaGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATc                                                                                      <  1:2214042/100‑1 (MQ=255)
               tgaGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTa                                                                                   >  1:485224/1‑100 (MQ=255)
                gaGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTAt                                                                                  <  2:945725/100‑1 (MQ=255)
                 aGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTAtt                                                                                 <  1:905520/100‑1 (MQ=255)
                 aGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTAtt                                                                                 <  1:896052/100‑1 (MQ=255)
                    cGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGtt                                                                              >  1:1002265/1‑100 (MQ=255)
                     gTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGttt                                                                             >  2:1739470/1‑100 (MQ=255)
                        cATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTAcc                                                                          <  2:167715/100‑1 (MQ=255)
                         aTGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCt                                                                         <  1:703444/100‑1 (MQ=255)
                          tGATACAGGAGTAGTAAAGTGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTa                                                                        <  2:2416111/100‑1 (MQ=255)
                          tGATACAGGAGTAGTAAAGGACATATTTTACAAATGTTAAGGCGACTTTCCGATTTATTGAGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTa                                                                        >  2:347403/1‑100 (MQ=255)
                            aaatgattaggtaaacaataagatttataatcaggaAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAAt                                                                      >  1:776359‑M1/37‑100 (MQ=255)
                               gaGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCAt                                                                   >  2:1181897/2‑100 (MQ=255)
                               cAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCAt                                                                   >  2:2384331/1‑100 (MQ=255)
                                aGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCAtt                                                                  >  1:567019/1‑100 (MQ=255)
                                 ggAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCAttt                                                                 >  1:1944985/1‑100 (MQ=255)
                                  gatctgtaAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCAtttt                                                                <  1:2138843/95‑1 (MQ=255)
                                   agtagtAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTc                                                               <  1:620481/100‑1 (MQ=255)
                                   agtagtAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTc                                                               <  1:2352655/100‑1 (MQ=255)
                                    gtagtaAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTcc                                                              >  2:224491/1‑100 (MQ=255)
                                      agtaAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCtt                                                            >  1:300512/1‑100 (MQ=255)
                                      agtaAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCtt                                                            <  2:1057228/100‑1 (MQ=255)
                                       gtaAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCttt                                                           <  1:1083856/100‑1 (MQ=255)
                                        ttccgatcttatTTTTCCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTg                                                          <  1:2560998/91‑1 (MQ=255)
                                        taAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTg                                                          <  1:1858283/100‑1 (MQ=255)
                                         aaaGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATTTTATTGTTTACCTAATCATTTTCCTTTGc                                                         >  2:2436005/1‑100 (MQ=255)
                                         aaaGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTgn                                                         <  2:1226745/100‑2 (MQ=255)
                                         aaaGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGc                                                         <  1:238481/100‑1 (MQ=255)
                                         aaaGGGCATATTTTACCAATGTTAAGGCGACTTTCCGGTTTATTGCGAGTCGCCTTTCCTGACTATAAATCTTATTGTTTCCCTAATCATTTTCCTTTg                                                          >  2:2298065/1‑99 (MQ=255)
                                          ctccgatctttttACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCa                                                        <  1:820248/91‑1 (MQ=255)
                                          aaGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCa                                                        <  1:34998/100‑1 (MQ=255)
                                          aaGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCa                                                        <  1:415769/100‑1 (MQ=255)
                                             ggCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATaa                                                     >  1:63050/1‑100 (MQ=255)
                                             ggCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATaa                                                     >  2:570774/1‑100 (MQ=255)
                                             ggCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATa                                                      >  2:570837/1‑99 (MQ=255)
                                              gCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAAt                                                    >  2:2014488/1‑100 (MQ=255)
                                              gCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAAt                                                    >  2:836685/1‑100 (MQ=255)
                                               cATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATg                                                   >  1:1449881/1‑100 (MQ=255)
                                                 tatTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGTGCGTCGCCTTTCCTGATTATAAATCTTATTGTTTATCTAATCATTTTCCTTTGCATAATgc                                                  >  2:1026611/1‑99 (MQ=255)
                                                 tatTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTgagatcggaa                                                 >  2:2560985/1‑91 (MQ=255)
                                                 tatTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATgcg                                                 >  2:2502003/1‑100 (MQ=255)
                                                   ttttACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCaagatcggaa                                               >  2:820243/1‑91 (MQ=255)
                                                       taatcaggaaaggcgactcgcaataaaacggaaagtcgccttTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTggg                                           >  1:2049027‑M2/43‑100 (MQ=255)
                                                       aCCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTggg                                           <  2:291736/100‑1 (MQ=255)
                                                       aCCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTggg                                           >  1:1050131/1‑100 (MQ=255)
                                                        ccAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGa                                          >  2:1152187/1‑100 (MQ=255)
                                                         cAATGTTAAGGCGACTTTCCGTTTTGTTGCGAGTCGCCTTTCCTGATTATAAGTCTTATTGTTTGCCTAATCATTTTCCTTTGCATAATGCGCCTggg                                           >  2:29099/1‑98 (MQ=255)
                                                          aaTGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCATTTGCATAATGTGCCTGGGAtt                                        >  2:1761475/1‑100 (MQ=255)
                                                           caggaaaggcgactcgcaataaaacggaaagtcgccttTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGAt                                         >  2:1717536‑M2/39‑98 (MQ=255)
                                                           aTGTTAAGCCGGCTTTCCGTTTTATTCCGAATCGCCTTTCCTGATTATAATTCTTATTGTGTACCTAATCATTTTCCTTGCCACAACGCGCCTGGGttt                                        <  2:848678/99‑1 (MQ=255)
                                                             gTTAAGGCGACTTTCCGTTTTATTGCGAGTCGTCTTTCCTGGTTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAAt                                     <  2:908720/100‑1 (MQ=255)
                                                              ttAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATg                                    <  2:1296620/100‑1 (MQ=255)
                                                               tAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATgg                                   >  1:747231/1‑100 (MQ=255)
                                                                aaggcgactcgcaataaaacggaaagtcgccttTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGc                                  >  1:960822‑M2/34‑100 (MQ=255)
                                                                AAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGc                                  <  2:1335833‑M1/100‑1 (MQ=255)
                                                                 AGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAAt                                     <  2:2445079‑M1/96‑1 (MQ=255)
                                                                 AGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCg                                 <  1:1941468‑M1/100‑1 (MQ=255)
                                                                  GGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCgg                                >  2:1921404‑M1/1‑100 (MQ=255)
                                                                   GCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCggg                               >  2:271684‑M1/1‑100 (MQ=255)
                                                                      ACTTTCCGTTTTATTTCGAGTCTCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGc                            >  2:2589426‑M1/1‑100 (MQ=255)
                                                                       CTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCt                           <  1:1669045‑M1/100‑1 (MQ=255)
                                                                          tCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCtttt                        <  2:87896/100‑1 (MQ=255)
                                                                           ccGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTa                       <  1:1966525/100‑1 (MQ=255)
                                                                           ccGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTa                       >  2:673842/1‑100 (MQ=255)
                                                                           ccGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTa                       <  1:1686223/100‑1 (MQ=255)
                                                                            cGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAg                      <  1:2230029/100‑1 (MQ=255)
                                                                            cGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAg                      <  1:1537117/100‑1 (MQ=255)
                                                                                ttATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAAt                  <  2:1737906/100‑1 (MQ=255)
                                                                                 tATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATg                 >  2:1415054/1‑100 (MQ=255)
                                                                                  aTTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATga                >  1:1215870/1‑100 (MQ=255)
                                                                                   ttGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATgaa               >  2:825530/1‑100 (MQ=255)
                                                                                   ttGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTCTTAGGAATgaa               <  2:511377/100‑1 (MQ=255)
                                                                                     gCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATgaaag             <  1:1440888/100‑1 (MQ=255)
                                                                                      cGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCTCCTGGGATTAATGGCGGGTGCTTTTAGTAATgaaag             >  2:2470510/1‑99 (MQ=255)
                                                                                      cGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATgaaaga            <  2:719344/100‑1 (MQ=255)
                                                                                         gtcgccttTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGaaaa         <  2:2453830‑M2/92‑1 (MQ=255)
                                                                                         gtcgccttTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGaaaa         <  2:2453831‑M2/92‑1 (MQ=255)
                                                                                            gccttTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGc      >  2:1959528‑M2/6‑100 (MQ=255)
                                                                                            gccttTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGc      >  2:2554857‑M2/6‑100 (MQ=255)
                                                                                               ttTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCaa    <  2:853303‑M2/97‑1 (MQ=255)
                                                                                               ttTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAg   >  2:2441877‑M2/3‑100 (MQ=255)
                                                                                                tTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGc  <  2:1745648‑M2/99‑1 (MQ=255)
                                                                                                 |                                                                                                  
CAGCTTTAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGC  >  NC_000913/4536023‑4536218

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.