New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4602757 =	92 (1.130)	5 (0.070)	4/164	NT	6.0%	coding (102/771 nt)	yjjP	DUF1212 family inner membrane protein
	?	NC_000913	4602785 =	71 (0.950)					coding (74/771 nt)	yjjP	DUF1212 family inner membrane protein
Rejected: Frequency below cutoff threshold.

TTATGCAAACTGAGCAACAGCGAGCCGTAACACGGCTTTGTATCCAGTGTGGATTATTTCTTTTGCAACATGGTGCGGAAAGCGCGTTGGTTGATGAGCTTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/4602860‑4602757 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctttccGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGCTCAGTTTGCATAACTCGCCCTTTGTCATAGACGT  >  NC_000913/4602785‑4602881                                                                                                                                                                                                           TTATGCAAACTGAGCAACAGCGAGCCGTAACACGGCTTTGTATCCAGTGTGGATTATTTCTTTTGCAACATTGTGCGGAAAGCGCGTTGGTTGATGAGC                                                                                                        <  2:115846/99‑1   ATGCAAACTGAGCAACAGCGAGCCGTAACACGGCTTTGTATCCAGTGTGGATTATTTCTTTTGCAACATGGTGCGGAAAGCGCGTTGGTTGATGAGCTTT                                                                                                     <  1:2184691/100‑1   ATGCAAACTGAGCAACAGCGAGCCGTAACACGGCTTTGTATCCAGTGTGGATTATTTCTTTTGCAACATGGTGCGGAAAGCGCGTTGGTTGATGAGCTTT                                                                                                     >  1:744756/1‑100    TGCAAACTGAGCAACAGCGAGCCGTAACACGGCTTTGTATCCAGTGTGGATTATTTCTTTTGCAACATGGTGCGGAAAGCGCGTTGGTTTATGAGCTTTC                                                                                                    >  2:1470323/1‑100    TGCAAACTGAGCAACAGCGAGCCGTAACACGGCTTTGTATCCAGTGTGGATTATTTCTTTTGCAACATGGTGCGGAAAGCGCGTTGGTTGATGAGCTTT                                                                                                     >  1:2065763/1‑99     GCAAACTGAGCAACAGCGAGCCGTAACACGGCTTTGTATCCAGTGTGGATTATTTCTTTTGCAACATGGTGCGGAAAGCGCGTTGGTTGATGAGCTTTCC                                                                                                   <  1:1549581/100‑1     GCAAACTGAGCAACAGCGAGCCGTAACACGGCTTTGTATCCAGTGTGGATTATTTCTTTTGCAACATGGTGCGGAAAGCGCGTTGGTTGATGAGCTTTCC                                                                                                   >  2:1426735/1‑100              GCAACAGCGAGCCGTAACACGGGTTTGTATCAAGTGTGGATGATTTCTTTTGAAACATGTTGCGGAAAGCGCGTTGGTTGATGAGCTTTCgtcatga                                                                                             >  2:1336668/1‑90                                                                    ACATGGTGCGGACAGCGCGTTGGTTGATGAGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGC                                    >  1:1477268/1‑100                                                                       TGGTGCGGAAAGCGCGTTGGTTGATGAGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGCTCA                                 >  1:131710/1‑100                                                                          TGCGGAAAGCGCGTTGGTTGATGAGCTTTCCGCACCATGTTGCAAAAGAAATGATCCACACTAGATACGAAGCCGTGATACGGCTCGCTGTTGCTCAGTT                              >  2:1512692/1‑100                                                                           GCGGAAAGCGCGTTGGTTGATGAGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGCTCAGTTT                             >  1:2080697/1‑100                                                                           GCGGAAAGCGCGTTGGTTGATGAGCTTTCCGCACCAGGTTGCAAAAGATATAATCCACACTGGATACAAAGCAGTGTTACGGCGCGCTGTTCCTCAGTTT                             >  1:1409857/1‑100                                                                                                  GCTATCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGCTCAGTTTGCATAACTCGCCCTTTGTCATAG      <  1:2103640/100‑1                                                                                                    TTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGCTCAGTTTGCATAACTCGCCCTTTGTCATAGAC    <  1:263476/100‑1                                                                                                      TCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGCTCAGTTTGCATAACTCGCCCTTTGTCATAGACGT  >  1:938953/1‑100                                                                                                      TCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGCTCAGTTTGCATAACTCGCCCTTTGTCATAGACGT  >  1:1926799/1‑100                                                                                                                                                                                                           TTATGCAAACTGAGCAACAGCGAGCCGTAACACGGCTTTGTATCCAGTGTGGATTATTTCTTTTGCAACATGGTGCGGAAAGCGCGTTGGTTGATGAGCTTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/4602860‑4602757 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctttccGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGCTCAGTTTGCATAACTCGCCCTTTGTCATAGACGT  >  NC_000913/4602785‑4602881

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.